RNA–Protein interactions for RNA: ENST00000369553.5

HIPK1-203, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 2,883 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-203ENST00000369553 GTPBP4Q9BZE4 634 aaKnown RBP13.22□□□□□ -0.29
HIPK1-203ENST00000369553 IRX5P78411 483 aaPredicted RBP13.22□□□□□ -0.29
HIPK1-203ENST00000369553 TMEM132EQ6IEE7 984 aa13.21□□□□□ -0.29
HIPK1-203ENST00000369553 FSD2A1L4K1 749 aa13.21□□□□□ -0.3
HIPK1-203ENST00000369553 GZF1Q9H116 711 aaPredicted RBP13.21□□□□□ -0.3
HIPK1-203ENST00000369553 SENP3Q9H4L4 574 aaPredicted RBP13.21□□□□□ -0.3
HIPK1-203ENST00000369553 ZFYVE9O95405 1425 aa13.21□□□□□ -0.3
HIPK1-203ENST00000369553 ESF1Q9H501 851 aaKnown RBP13.2□□□□□ -0.3
HIPK1-203ENST00000369553 MYO3AQ8NEV4 1616 aa13.2□□□□□ -0.3
HIPK1-203ENST00000369553 MYH16Q9H6N6 1097 aa13.2□□□□□ -0.3
HIPK1-203ENST00000369553 EIF3AQ14152 1382 aaKnown RBP13.2□□□□□ -0.3
HIPK1-203ENST00000369553 A2ML1A8K2U0 1454 aa13.19□□□□□ -0.3
HIPK1-203ENST00000369553 TRIM44Q96DX7 344 aaPredicted RBP13.19□□□□□ -0.3
HIPK1-203ENST00000369553 CCDC94Q9BW85 323 aaPredicted RBP13.19□□□□□ -0.3
HIPK1-203ENST00000369553 TAOK2Q9UL54 1235 aa13.19□□□□□ -0.3
HIPK1-203ENST00000369553 CFAP44Q96MT7 982 aa13.19□□□□□ -0.3
HIPK1-203ENST00000369553 R3HCC1Q9Y3T6 440 aaKnown RBP13.19□□□□□ -0.3
HIPK1-203ENST00000369553 PRR29P0C7W0 189 aa13.18□□□□□ -0.3
HIPK1-203ENST00000369553 TRAK1Q9UPV9 953 aa13.18□□□□□ -0.3
HIPK1-203ENST00000369553 ASXL1Q8IXJ9 1541 aa13.18□□□□□ -0.3
HIPK1-203ENST00000369553 MTERF4Q7Z6M4 381 aaKnown RBP13.18□□□□□ -0.3
HIPK1-203ENST00000369553 STAG3Q9UJ98 1225 aa13.18□□□□□ -0.3
HIPK1-203ENST00000369553 OFD1O75665 1012 aa13.17□□□□□ -0.3
HIPK1-203ENST00000369553 MS4A1P11836 297 aa13.17□□□□□ -0.3
HIPK1-203ENST00000369553 SKAP1Q86WV1 359 aa13.17□□□□□ -0.3
HIPK1-203ENST00000369553 CBX1P83916 185 aa13.17□□□□□ -0.3
HIPK1-203ENST00000369553 TAF3Q5VWG9 929 aa13.17□□□□□ -0.3
HIPK1-203ENST00000369553 UQCRHLA0A096LP55 91 aa13.16□□□□□ -0.3
HIPK1-203ENST00000369553 UQCRHP07919 91 aa13.16□□□□□ -0.3
HIPK1-203ENST00000369553 MYOM1P52179 1685 aa13.16□□□□□ -0.3
HIPK1-203ENST00000369553 PER1O15534 1290 aaPredicted RBP13.16□□□□□ -0.3
HIPK1-203ENST00000369553 QRICH2Q9H0J4 1663 aa13.16□□□□□ -0.3
HIPK1-203ENST00000369553 TNRQ92752 1358 aa13.16□□□□□ -0.3
HIPK1-203ENST00000369553 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.15□□□□□ -0.3
HIPK1-203ENST00000369553 PANK3Q9H999 370 aa13.15□□□□□ -0.3
HIPK1-203ENST00000369553 ARHGEF28Q8N1W1 1705 aaKnown RBP13.15□□□□□ -0.3
HIPK1-203ENST00000369553 IGSF3O75054 1194 aa13.15□□□□□ -0.3
HIPK1-203ENST00000369553 RIMS2Q9UQ26 1411 aa13.15□□□□□ -0.3
HIPK1-203ENST00000369553 KDM5AP29375 1690 aaKnown RBP13.15□□□□□ -0.31
HIPK1-203ENST00000369553 CEBPAP49715 358 aaPredicted RBP13.14□□□□□ -0.31
HIPK1-203ENST00000369553 FER1L4A9Z1Z3 1794 aa13.14□□□□□ -0.31
HIPK1-203ENST00000369553 EP400NLQ6ZTU2 488 aa13.14□□□□□ -0.31
HIPK1-203ENST00000369553 FAM9BQ8IZU0 186 aa13.14□□□□□ -0.31
HIPK1-203ENST00000369553 C3P01024 1663 aa13.14□□□□□ -0.31
HIPK1-203ENST00000369553 ALKQ9UM73 1620 aa13.13□□□□□ -0.31
HIPK1-203ENST00000369553 KCNJ4P48050 445 aa13.13□□□□□ -0.31
HIPK1-203ENST00000369553 GRIPAP1Q4V328 841 aa13.13□□□□□ -0.31
HIPK1-203ENST00000369553 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.13□□□□□ -0.31
HIPK1-203ENST00000369553 MRS2Q9HD23 443 aa13.13□□□□□ -0.31
HIPK1-203ENST00000369553 FBXO3Q9UK99 471 aa13.13□□□□□ -0.31
HIPK1-203ENST00000369553 CCDC9Q9Y3X0 531 aaKnown RBP13.13□□□□□ -0.31
HIPK1-203ENST00000369553 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.13□□□□□ -0.31
HIPK1-203ENST00000369553 TERF1P54274 439 aa13.13□□□□□ -0.31
HIPK1-203ENST00000369553 ZNF622Q969S3 477 aaKnown RBP eCLIP13.12□□□□□ -0.31
HIPK1-203ENST00000369553 ZBED9Q6R2W3 1325 aa13.12□□□□□ -0.31
HIPK1-203ENST00000369553 SBNO2Q9Y2G9 1366 aa13.12□□□□□ -0.31
HIPK1-203ENST00000369553 PTMAP06454 111 aaKnown RBP13.12□□□□□ -0.31
HIPK1-203ENST00000369553 MRE11P49959 708 aa13.12□□□□□ -0.31
HIPK1-203ENST00000369553 UBR1Q8IWV7 1749 aa13.12□□□□□ -0.31
HIPK1-203ENST00000369553 CDCA8Q53HL2 280 aa13.11□□□□□ -0.31
HIPK1-203ENST00000369553 DNAJC2Q99543 621 aaKnown RBP13.11□□□□□ -0.31
HIPK1-203ENST00000369553 SETD1AO15047 1707 aaKnown RBP13.11□□□□□ -0.31
HIPK1-203ENST00000369553 PTPRMP28827 1452 aa13.11□□□□□ -0.31
HIPK1-203ENST00000369553 STK26Q9P289 416 aa13.1□□□□□ -0.31
HIPK1-203ENST00000369553 TICAM2Q86XR7 235 aa13.1□□□□□ -0.31
HIPK1-203ENST00000369553 NRXN3Q9Y4C0 1643 aa13.1□□□□□ -0.31
HIPK1-203ENST00000369553 PARD3Q8TEW0 1356 aa13.09□□□□□ -0.31
HIPK1-203ENST00000369553 GRPEL1Q9HAV7 217 aa13.09□□□□□ -0.31
HIPK1-203ENST00000369553 YTHDC2Q9H6S0 1430 aaKnown RBP13.09□□□□□ -0.31
HIPK1-203ENST00000369553 RALBP1Q15311 655 aa13.08□□□□□ -0.32
HIPK1-203ENST00000369553 KTN1Q86UP2 1357 aaKnown RBP13.08□□□□□ -0.32
HIPK1-203ENST00000369553 CC2D1BQ5T0F9 858 aaKnown RBP13.08□□□□□ -0.32
HIPK1-203ENST00000369553 SLKQ9H2G2 1235 aaPredicted RBP13.08□□□□□ -0.32
HIPK1-203ENST00000369553 RNF123Q5XPI4 1314 aa13.08□□□□□ -0.32
HIPK1-203ENST00000369553 SLC20A2Q08357 652 aa13.07□□□□□ -0.32
HIPK1-203ENST00000369553 TULP4Q9NRJ4 1543 aa13.07□□□□□ -0.32
HIPK1-203ENST00000369553 DYNC1I1O14576 645 aa13.07□□□□□ -0.32
HIPK1-203ENST00000369553 MYBBP1AQ9BQG0 1328 aaKnown RBP13.07□□□□□ -0.32
HIPK1-203ENST00000369553 TRIM6-TRIM34B2RNG4 842 aa13.06□□□□□ -0.32
HIPK1-203ENST00000369553 SAFB2Q14151 953 aaKnown RBP eCLIP13.06□□□□□ -0.32
HIPK1-203ENST00000369553 TRIM34Q9BYJ4 488 aa13.06□□□□□ -0.32
HIPK1-203ENST00000369553 AXDND1Q5T1B0 1012 aaPredicted RBP13.06□□□□□ -0.32
HIPK1-203ENST00000369553 NLRP1Q9C000 1473 aa13.06□□□□□ -0.32
HIPK1-203ENST00000369553 TMEM2Q9UHN6 1383 aa13.06□□□□□ -0.32
HIPK1-203ENST00000369553 ZNF592Q92610 1267 aa13.06□□□□□ -0.32
HIPK1-203ENST00000369553 LOC102724159A0A0B4J2E5 919 aa13.05□□□□□ -0.32
HIPK1-203ENST00000369553 PWP2Q15269 919 aaKnown RBP13.05□□□□□ -0.32
HIPK1-203ENST00000369553 TPRNQ4KMQ1 711 aa13.05□□□□□ -0.32
HIPK1-203ENST00000369553 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.05□□□□□ -0.32
HIPK1-203ENST00000369553 EXOC6Q8TAG9 804 aa13.05□□□□□ -0.32
HIPK1-203ENST00000369553 ATP2B3Q16720 1220 aa13.04□□□□□ -0.32
HIPK1-203ENST00000369553 RIMS1Q86UR5 1692 aaKnown RBP13.04□□□□□ -0.32
HIPK1-203ENST00000369553 PRAM1Q96QH2 718 aa13.04□□□□□ -0.32
HIPK1-203ENST00000369553 CARD14Q9BXL6 1004 aa13.04□□□□□ -0.32
HIPK1-203ENST00000369553 ZNF771Q7L3S4 317 aaPredicted RBP13.03□□□□□ -0.32
HIPK1-203ENST00000369553 KNSTRNQ9Y448 316 aa13.03□□□□□ -0.32
HIPK1-203ENST00000369553 ZSCAN30Q86W11 494 aa13.03□□□□□ -0.32
HIPK1-203ENST00000369553 PNISRQ8TF01 805 aaKnown RBP13.03□□□□□ -0.32
HIPK1-203ENST00000369553 BRD4O60885 1362 aaPredicted RBP13.03□□□□□ -0.32
HIPK1-203ENST00000369553 METP08581 1390 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms