RNA–Protein interactions for RNA: ENST00000369214.2

PRDM13-201, Transcript of PR/SET domain 13, humanhuman

TSL 5

Gene PRDM13, Length 3,232 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM13-201ENST00000369214 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.54■■□□□ 1.36
PRDM13-201ENST00000369214 ATF7IPQ6VMQ6 1270 aa23.54■■□□□ 1.36
PRDM13-201ENST00000369214 IL16Q14005 1332 aa23.53■■□□□ 1.36
PRDM13-201ENST00000369214 L1TD1Q5T7N2 865 aaKnown RBP23.53■■□□□ 1.36
PRDM13-201ENST00000369214 ITPRIPQ8IWB1 547 aa23.53■■□□□ 1.36
PRDM13-201ENST00000369214 ANKRD26Q9UPS8 1709 aa23.51■■□□□ 1.35
PRDM13-201ENST00000369214 MFAP1P55081 439 aaKnown RBP23.51■■□□□ 1.35
PRDM13-201ENST00000369214 SAFB2Q14151 953 aaKnown RBP eCLIP23.51■■□□□ 1.35
PRDM13-201ENST00000369214 GGNBP2Q9H3C7 697 aa23.51■■□□□ 1.35
PRDM13-201ENST00000369214 SMC5Q8IY18 1101 aa23.51■■□□□ 1.35
PRDM13-201ENST00000369214 NOB1Q9ULX3 412 aaKnown RBP23.5■■□□□ 1.35
PRDM13-201ENST00000369214 SPRYD3Q8NCJ5 442 aa23.49■■□□□ 1.35
PRDM13-201ENST00000369214 SRPK2P78362 688 aaKnown RBP23.48■■□□□ 1.35
PRDM13-201ENST00000369214 MCM4P33991 863 aa23.48■■□□□ 1.35
PRDM13-201ENST00000369214 MED14O60244 1454 aa23.47■■□□□ 1.35
PRDM13-201ENST00000369214 TMEM57Q8N5G2 664 aa23.47■■□□□ 1.35
PRDM13-201ENST00000369214 CHMP5Q9NZZ3 219 aa23.47■■□□□ 1.35
PRDM13-201ENST00000369214 ZFYVE9O95405 1425 aa23.47■■□□□ 1.35
PRDM13-201ENST00000369214 ZBTB40Q9NUA8 1239 aa23.46■■□□□ 1.35
PRDM13-201ENST00000369214 RIPK4P57078 832 aa23.46■■□□□ 1.35
PRDM13-201ENST00000369214 FYB1O15117 783 aa23.46■■□□□ 1.35
PRDM13-201ENST00000369214 ATAD2Q6PL18 1390 aa23.45■■□□□ 1.35
PRDM13-201ENST00000369214 KIF16BQ96L93 1317 aa23.45■■□□□ 1.35
PRDM13-201ENST00000369214 TERF2IPQ9NYB0 399 aa23.45■■□□□ 1.34
PRDM13-201ENST00000369214 STK26Q9P289 416 aa23.45■■□□□ 1.34
PRDM13-201ENST00000369214 IPO8O15397 1037 aaKnown RBP23.44■■□□□ 1.34
PRDM13-201ENST00000369214 NPM1P06748 294 aaKnown RBP eCLIP23.44■■□□□ 1.34
PRDM13-201ENST00000369214 PNNQ9H307 717 aaKnown RBP23.43■■□□□ 1.34
PRDM13-201ENST00000369214 CD163L1Q9NR16 1453 aa23.43■■□□□ 1.34
PRDM13-201ENST00000369214 CLTCQ00610 1675 aaKnown RBP23.42■■□□□ 1.34
PRDM13-201ENST00000369214 DIAPH1O60610 1272 aaKnown RBP23.42■■□□□ 1.34
PRDM13-201ENST00000369214 IDI1Q13907 227 aa23.42■■□□□ 1.34
PRDM13-201ENST00000369214 ARHGAP31Q2M1Z3 1444 aa23.42■■□□□ 1.34
PRDM13-201ENST00000369214 PTPRMP28827 1452 aa23.42■■□□□ 1.34
PRDM13-201ENST00000369214 ALDH1L2Q3SY69 923 aa23.41■■□□□ 1.34
PRDM13-201ENST00000369214 HSCBQ8IWL3 235 aa23.41■■□□□ 1.34
PRDM13-201ENST00000369214 PNPLA6Q8IY17 1366 aa23.41■■□□□ 1.34
PRDM13-201ENST00000369214 NUCB1Q02818 461 aa23.4■■□□□ 1.34
PRDM13-201ENST00000369214 FSD2A1L4K1 749 aa23.39■■□□□ 1.34
PRDM13-201ENST00000369214 GOLGA6L3A6NEY3 463 aa23.39■■□□□ 1.34
PRDM13-201ENST00000369214 MINK1Q8N4C8 1332 aaPredicted RBP23.39■■□□□ 1.34
PRDM13-201ENST00000369214 MYO5BQ9ULV0 1848 aa23.39■■□□□ 1.33
PRDM13-201ENST00000369214 DNAJC5Q9H3Z4 198 aa23.38■■□□□ 1.33
PRDM13-201ENST00000369214 RBM25P49756 843 aaKnown RBP23.38■■□□□ 1.33
PRDM13-201ENST00000369214 SLC52A1Q9NWF4 448 aa23.38■■□□□ 1.33
PRDM13-201ENST00000369214 DIP2CQ9Y2E4 1556 aa23.37■■□□□ 1.33
PRDM13-201ENST00000369214 PRAM1Q96QH2 718 aa23.37■■□□□ 1.33
PRDM13-201ENST00000369214 XRCC6P12956 609 aaKnown RBP eCLIP23.37■■□□□ 1.33
PRDM13-201ENST00000369214 ZNF692Q9BU19 519 aaPredicted RBP23.37■■□□□ 1.33
PRDM13-201ENST00000369214 CDC42BPGQ6DT37 1551 aa23.36■■□□□ 1.33
PRDM13-201ENST00000369214 KIF20BQ96Q89 1820 aa23.36■■□□□ 1.33
PRDM13-201ENST00000369214 HDGFL2Q7Z4V5 671 aaPredicted RBP23.36■■□□□ 1.33
PRDM13-201ENST00000369214 RSPH6AQ9H0K4 717 aa23.36■■□□□ 1.33
PRDM13-201ENST00000369214 NCOA3Q9Y6Q9 1424 aa23.36■■□□□ 1.33
PRDM13-201ENST00000369214 TRAK2O60296 914 aa23.36■■□□□ 1.33
PRDM13-201ENST00000369214 FCHSD2O94868 740 aa23.35■■□□□ 1.33
PRDM13-201ENST00000369214 LNPKQ9C0E8 428 aa23.35■■□□□ 1.33
PRDM13-201ENST00000369214 CHD1LQ86WJ1 897 aa23.35■■□□□ 1.33
PRDM13-201ENST00000369214 SENP3Q9H4L4 574 aaPredicted RBP23.35■■□□□ 1.33
PRDM13-201ENST00000369214 LRRC7Q96NW7 1537 aa23.35■■□□□ 1.33
PRDM13-201ENST00000369214 YTHDC2Q9H6S0 1430 aaKnown RBP23.35■■□□□ 1.33
PRDM13-201ENST00000369214 BRPF1P55201 1214 aaPredicted RBP23.35■■□□□ 1.33
PRDM13-201ENST00000369214 RAPGEF3O95398 923 aa23.34■■□□□ 1.33
PRDM13-201ENST00000369214 SNX21Q969T3 373 aa23.34■■□□□ 1.33
PRDM13-201ENST00000369214 ZNF428Q96B54 188 aa23.34■■□□□ 1.33
PRDM13-201ENST00000369214 GZF1Q9H116 711 aaPredicted RBP23.34■■□□□ 1.33
PRDM13-201ENST00000369214 RRAGDQ9NQL2 400 aaPredicted RBP23.34■■□□□ 1.33
PRDM13-201ENST00000369214 TMEM131LA2VDJ0 1609 aa23.34■■□□□ 1.33
PRDM13-201ENST00000369214 NEO1Q92859 1461 aa23.32■■□□□ 1.32
PRDM13-201ENST00000369214 DDIT3P35638 169 aa23.32■■□□□ 1.32
PRDM13-201ENST00000369214 PPIP5K1Q6PFW1 1433 aa23.32■■□□□ 1.32
PRDM13-201ENST00000369214 FAM135BQ49AJ0 1406 aa23.32■■□□□ 1.32
PRDM13-201ENST00000369214 DDX11L8A8MPP1 907 aa23.31■■□□□ 1.32
PRDM13-201ENST00000369214 ARXQ96QS3 562 aa23.31■■□□□ 1.32
PRDM13-201ENST00000369214 BMP2KLQ5H9B9 411 aa23.31■■□□□ 1.32
PRDM13-201ENST00000369214 PREX1Q8TCU6 1659 aa23.3■■□□□ 1.32
PRDM13-201ENST00000369214 PRKAR2BP31323 418 aa23.3■■□□□ 1.32
PRDM13-201ENST00000369214 CDK19Q9BWU1 502 aa23.3■■□□□ 1.32
PRDM13-201ENST00000369214 CYB5RLQ6IPT4 315 aa23.29■■□□□ 1.32
PRDM13-201ENST00000369214 ARHGEF40Q8TER5 1519 aa23.29■■□□□ 1.32
PRDM13-201ENST00000369214 CHMP4BQ9H444 224 aaKnown RBP23.29■■□□□ 1.32
PRDM13-201ENST00000369214 CABP1Q9NZU7 370 aa23.29■■□□□ 1.32
PRDM13-201ENST00000369214 ZBTB7BO15156 539 aaPredicted RBP23.28■■□□□ 1.32
PRDM13-201ENST00000369214 GCC1Q96CN9 775 aa23.28■■□□□ 1.32
PRDM13-201ENST00000369214 EIF5BO60841 1220 aaKnown RBP23.28■■□□□ 1.32
PRDM13-201ENST00000369214 ARHGAP45Q92619 1136 aa23.27■■□□□ 1.32
PRDM13-201ENST00000369214 PIK3R4Q99570 1358 aa23.27■■□□□ 1.32
PRDM13-201ENST00000369214 MRPL50Q8N5N7 158 aaKnown RBP23.26■■□□□ 1.31
PRDM13-201ENST00000369214 PANK2Q9BZ23 570 aa23.26■■□□□ 1.31
PRDM13-201ENST00000369214 PTCH1Q13635 1447 aa23.26■■□□□ 1.31
PRDM13-201ENST00000369214 VAMP4O75379 141 aa23.26■■□□□ 1.31
PRDM13-201ENST00000369214 ANKRD45Q5TZF3 282 aa23.26■■□□□ 1.31
PRDM13-201ENST00000369214 POLKQ9UBT6 870 aa23.26■■□□□ 1.31
PRDM13-201ENST00000369214 CIZ1Q9ULV3 898 aaPredicted RBP23.26■■□□□ 1.31
PRDM13-201ENST00000369214 ALKQ9UM73 1620 aa23.26■■□□□ 1.31
PRDM13-201ENST00000369214 MRE11P49959 708 aa23.25■■□□□ 1.31
PRDM13-201ENST00000369214 NFE2L2Q16236 605 aa23.25■■□□□ 1.31
PRDM13-201ENST00000369214 CALD1Q05682 793 aaKnown RBP23.24■■□□□ 1.31
PRDM13-201ENST00000369214 HSP90AB1P08238 724 aaKnown RBP23.24■■□□□ 1.31
PRDM13-201ENST00000369214 RICTORQ6R327 1708 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms