RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 SYCE3A1L190 88 aa12.47□□□□□ -0.41
PRDM1-201ENST00000369089 LOC102724159A0A0B4J2E5 919 aa12.46□□□□□ -0.41
PRDM1-201ENST00000369089 PWP2Q15269 919 aaKnown RBP12.46□□□□□ -0.41
PRDM1-201ENST00000369089 SAMD1Q6SPF0 538 aaPredicted RBP12.46□□□□□ -0.41
PRDM1-201ENST00000369089 DYDC1Q8WWB3 177 aa12.46□□□□□ -0.41
PRDM1-201ENST00000369089 ZNF853P0CG23 659 aa12.46□□□□□ -0.41
PRDM1-201ENST00000369089 ZBTB9Q96C00 473 aa12.46□□□□□ -0.41
PRDM1-201ENST00000369089 TRIM5Q9C035 493 aa12.46□□□□□ -0.41
PRDM1-201ENST00000369089 SUDS3Q9H7L9 328 aaPredicted RBP12.46□□□□□ -0.41
PRDM1-201ENST00000369089 CCP110O43303 1012 aa12.46□□□□□ -0.42
PRDM1-201ENST00000369089 FOXD4L6Q3SYB3 417 aaPredicted RBP12.46□□□□□ -0.42
PRDM1-201ENST00000369089 FOXD4L3Q6VB84 417 aaPredicted RBP12.46□□□□□ -0.42
PRDM1-201ENST00000369089 CEP83Q9Y592 693 aa12.46□□□□□ -0.42
PRDM1-201ENST00000369089 SKIDA1Q1XH10 827 aa12.46□□□□□ -0.42
PRDM1-201ENST00000369089 LRRFIP2Q9Y608 721 aaKnown RBP12.46□□□□□ -0.42
PRDM1-201ENST00000369089 KIF15Q9NS87 1388 aa12.46□□□□□ -0.42
PRDM1-201ENST00000369089 GEMIN8Q9NWZ8 242 aaKnown RBP12.45□□□□□ -0.42
PRDM1-201ENST00000369089 GORABQ5T7V8 394 aa12.45□□□□□ -0.42
PRDM1-201ENST00000369089 GBP6Q6ZN66 633 aa12.45□□□□□ -0.42
PRDM1-201ENST00000369089 TICAM2Q86XR7 235 aa12.45□□□□□ -0.42
PRDM1-201ENST00000369089 CLUAP1Q96AJ1 413 aa12.45□□□□□ -0.42
PRDM1-201ENST00000369089 COG6Q9Y2V7 657 aa12.45□□□□□ -0.42
PRDM1-201ENST00000369089 ZBTB22O15209 634 aa12.44□□□□□ -0.42
PRDM1-201ENST00000369089 CEP120Q8N960 986 aa12.44□□□□□ -0.42
PRDM1-201ENST00000369089 YY1AP1Q9H869 796 aa12.44□□□□□ -0.42
PRDM1-201ENST00000369089 ICE2Q659A1 982 aa12.44□□□□□ -0.42
PRDM1-201ENST00000369089 KRBA2Q6ZNG9 492 aa12.44□□□□□ -0.42
PRDM1-201ENST00000369089 PPP1R9BQ96SB3 815 aa12.44□□□□□ -0.42
PRDM1-201ENST00000369089 K7ELQ4 463 aaPredicted RBP12.44□□□□□ -0.42
PRDM1-201ENST00000369089 CCDC172P0C7W6 258 aa12.44□□□□□ -0.42
PRDM1-201ENST00000369089 ZSCAN20P17040 1043 aaPredicted RBP12.44□□□□□ -0.42
PRDM1-201ENST00000369089 SKAP1Q86WV1 359 aa12.44□□□□□ -0.42
PRDM1-201ENST00000369089 KIAA1328Q86T90 577 aa12.44□□□□□ -0.42
PRDM1-201ENST00000369089 CNKSR2Q8WXI2 1034 aa12.44□□□□□ -0.42
PRDM1-201ENST00000369089 CWC22Q9HCG8 908 aaKnown RBP12.44□□□□□ -0.42
PRDM1-201ENST00000369089 STK26Q9P289 416 aa12.44□□□□□ -0.42
PRDM1-201ENST00000369089 CENPHQ9H3R5 247 aa12.43□□□□□ -0.42
PRDM1-201ENST00000369089 FAM177BA6PVY3 158 aa12.43□□□□□ -0.42
PRDM1-201ENST00000369089 DNAJC5BQ9UF47 199 aa12.43□□□□□ -0.42
PRDM1-201ENST00000369089 CASQ1P31415 396 aa12.43□□□□□ -0.42
PRDM1-201ENST00000369089 AP1ARQ63HQ0 302 aa12.43□□□□□ -0.42
PRDM1-201ENST00000369089 KIF18AQ8NI77 898 aa12.43□□□□□ -0.42
PRDM1-201ENST00000369089 PPM1EQ8WY54 764 aa12.43□□□□□ -0.42
PRDM1-201ENST00000369089 NCOA2Q15596 1464 aa12.43□□□□□ -0.42
PRDM1-201ENST00000369089 ERLIN1O75477 346 aa12.43□□□□□ -0.42
PRDM1-201ENST00000369089 HDGFP51858 240 aaKnown RBP12.43□□□□□ -0.42
PRDM1-201ENST00000369089 ITPRIPQ8IWB1 547 aa12.43□□□□□ -0.42
PRDM1-201ENST00000369089 STK31Q9BXU1 1019 aa12.43□□□□□ -0.42
PRDM1-201ENST00000369089 BCL2L12Q9HB09 334 aa12.43□□□□□ -0.42
PRDM1-201ENST00000369089 PTPN14Q15678 1187 aa12.42□□□□□ -0.42
PRDM1-201ENST00000369089 CCDC184Q52MB2 194 aa12.42□□□□□ -0.42
PRDM1-201ENST00000369089 MORC1Q86VD1 984 aa12.42□□□□□ -0.42
PRDM1-201ENST00000369089 FMNL3Q8IVF7 1028 aa12.42□□□□□ -0.42
PRDM1-201ENST00000369089 NCAPGQ9BPX3 1015 aa12.42□□□□□ -0.42
PRDM1-201ENST00000369089 TRHP20396 242 aaPredicted RBP12.42□□□□□ -0.42
PRDM1-201ENST00000369089 RRBP1Q9P2E9 1410 aaKnown RBP12.42□□□□□ -0.42
PRDM1-201ENST00000369089 KIF1CO43896 1103 aaKnown RBP12.42□□□□□ -0.42
PRDM1-201ENST00000369089 CCDC70Q6NSX1 233 aa12.42□□□□□ -0.42
PRDM1-201ENST00000369089 MYO6Q9UM54 1294 aa12.42□□□□□ -0.42
PRDM1-201ENST00000369089 ST20-MTHFSA0A0A6YYL1 179 aa12.41□□□□□ -0.42
PRDM1-201ENST00000369089 C16orf45Q96MC5 204 aaPredicted RBP12.41□□□□□ -0.42
PRDM1-201ENST00000369089 V9GYY5 206 aaPredicted RBP12.41□□□□□ -0.42
PRDM1-201ENST00000369089 CCDC7Q96M83 1385 aa12.41□□□□□ -0.42
PRDM1-201ENST00000369089 MRC2Q9UBG0 1479 aa12.41□□□□□ -0.42
PRDM1-201ENST00000369089 GOLGA6L10A6NI86 522 aa12.41□□□□□ -0.42
PRDM1-201ENST00000369089 FYCO1Q9BQS8 1478 aa12.41□□□□□ -0.42
PRDM1-201ENST00000369089 PPP2R5AQ15172 486 aa12.41□□□□□ -0.42
PRDM1-201ENST00000369089 IPO8O15397 1037 aaKnown RBP12.41□□□□□ -0.42
PRDM1-201ENST00000369089 MICALL1Q8N3F8 863 aa12.41□□□□□ -0.42
PRDM1-201ENST00000369089 SATB1Q01826 763 aa12.4□□□□□ -0.42
PRDM1-201ENST00000369089 UVSSAQ2YD98 709 aa12.4□□□□□ -0.42
PRDM1-201ENST00000369089 ZSCAN23Q3MJ62 389 aa12.4□□□□□ -0.42
PRDM1-201ENST00000369089 OSCARQ8IYS5 282 aa12.4□□□□□ -0.42
PRDM1-201ENST00000369089 CCDC144AA2RUR9 1427 aa12.4□□□□□ -0.42
PRDM1-201ENST00000369089 PEG3Q9GZU2 1588 aa12.4□□□□□ -0.42
PRDM1-201ENST00000369089 UACAQ9BZF9 1416 aa12.4□□□□□ -0.43
PRDM1-201ENST00000369089 A0A1B0GUA9 196 aa12.4□□□□□ -0.43
PRDM1-201ENST00000369089 NOL8Q76FK4 1167 aaKnown RBP12.4□□□□□ -0.43
PRDM1-201ENST00000369089 RUFY1Q96T51 708 aa12.4□□□□□ -0.43
PRDM1-201ENST00000369089 IBSPP21815 317 aaPredicted RBP12.39□□□□□ -0.43
PRDM1-201ENST00000369089 C8orf34Q49A92 452 aa12.39□□□□□ -0.43
PRDM1-201ENST00000369089 JRKLQ9Y4A0 524 aa12.39□□□□□ -0.43
PRDM1-201ENST00000369089 CCDC34Q96HJ3 373 aa12.39□□□□□ -0.43
PRDM1-201ENST00000369089 USP25Q9UHP3 1055 aa12.39□□□□□ -0.43
PRDM1-201ENST00000369089 SHTN1A0MZ66 631 aa12.39□□□□□ -0.43
PRDM1-201ENST00000369089 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.39□□□□□ -0.43
PRDM1-201ENST00000369089 DNMBPQ6XZF7 1577 aa12.39□□□□□ -0.43
PRDM1-201ENST00000369089 NEBLO76041 1014 aa12.38□□□□□ -0.43
PRDM1-201ENST00000369089 SMTNL1A8MU46 457 aa12.38□□□□□ -0.43
PRDM1-201ENST00000369089 DCTN1Q14203 1278 aa12.38□□□□□ -0.43
PRDM1-201ENST00000369089 LRSAM1Q6UWE0 723 aa12.38□□□□□ -0.43
PRDM1-201ENST00000369089 TBC1D32Q96NH3 1257 aa12.38□□□□□ -0.43
PRDM1-201ENST00000369089 TSC1Q92574 1164 aa12.38□□□□□ -0.43
PRDM1-201ENST00000369089 TERF2IPQ9NYB0 399 aa12.38□□□□□ -0.43
PRDM1-201ENST00000369089 IFT140Q96RY7 1462 aa12.37□□□□□ -0.43
PRDM1-201ENST00000369089 ADCY5O95622 1261 aa12.37□□□□□ -0.43
PRDM1-201ENST00000369089 CCDC192P0DO97 292 aa12.37□□□□□ -0.43
PRDM1-201ENST00000369089 CCDC102AQ96A19 550 aa12.37□□□□□ -0.43
PRDM1-201ENST00000369089 DHX8Q14562 1220 aaKnown RBP12.37□□□□□ -0.43
PRDM1-201ENST00000369089 PIBF1Q8WXW3 757 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms