RNA–Protein interactions for RNA: ENST00000369068.4

RPRD2-202, Transcript of regulation of nuclear pre-mRNA domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPRD2, Length 4,612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD2-202ENST00000369068 FILIP1LQ4L180 1135 aa12.77□□□□□ -0.37
RPRD2-202ENST00000369068 NECTIN2Q92692 538 aa12.76□□□□□ -0.37
RPRD2-202ENST00000369068 DEF6Q9H4E7 631 aa12.76□□□□□ -0.37
RPRD2-202ENST00000369068 ATF7IPQ6VMQ6 1270 aa12.76□□□□□ -0.37
RPRD2-202ENST00000369068 CHD1LQ86WJ1 897 aa12.76□□□□□ -0.37
RPRD2-202ENST00000369068 WDR63Q8IWG1 891 aa12.76□□□□□ -0.37
RPRD2-202ENST00000369068 KIAA0754O94854 1291 aa12.75□□□□□ -0.37
RPRD2-202ENST00000369068 VPS53Q5VIR6 699 aa12.75□□□□□ -0.37
RPRD2-202ENST00000369068 KIF2AO00139 706 aaPredicted RBP12.75□□□□□ -0.37
RPRD2-202ENST00000369068 TTLL5Q6EMB2 1281 aa12.75□□□□□ -0.37
RPRD2-202ENST00000369068 HIP1O00291 1037 aa12.75□□□□□ -0.37
RPRD2-202ENST00000369068 MCM5P33992 734 aa12.75□□□□□ -0.37
RPRD2-202ENST00000369068 CBX1P83916 185 aa12.75□□□□□ -0.37
RPRD2-202ENST00000369068 ERICH2A1L162 156 aa12.74□□□□□ -0.37
RPRD2-202ENST00000369068 SYCE3A1L190 88 aa12.74□□□□□ -0.37
RPRD2-202ENST00000369068 NUTM2FA1L443 756 aa12.74□□□□□ -0.37
RPRD2-202ENST00000369068 SURF6O75683 361 aaKnown RBP12.74□□□□□ -0.37
RPRD2-202ENST00000369068 PDIA4P13667 645 aaKnown RBP12.74□□□□□ -0.37
RPRD2-202ENST00000369068 UBXN4Q92575 508 aa12.74□□□□□ -0.37
RPRD2-202ENST00000369068 NOB1Q9ULX3 412 aaKnown RBP12.74□□□□□ -0.37
RPRD2-202ENST00000369068 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.74□□□□□ -0.37
RPRD2-202ENST00000369068 HMOX1P09601 288 aa12.74□□□□□ -0.37
RPRD2-202ENST00000369068 CLCN1P35523 988 aa12.74□□□□□ -0.37
RPRD2-202ENST00000369068 ERICH4A6NGS2 130 aa12.74□□□□□ -0.37
RPRD2-202ENST00000369068 SERPINC1P01008 464 aa12.74□□□□□ -0.37
RPRD2-202ENST00000369068 STK38Q15208 465 aa12.74□□□□□ -0.37
RPRD2-202ENST00000369068 NBPF8Q3BBV2 869 aa12.74□□□□□ -0.37
RPRD2-202ENST00000369068 PRDM10Q9NQV6 1147 aa12.74□□□□□ -0.37
RPRD2-202ENST00000369068 CYP46A1Q9Y6A2 500 aa12.74□□□□□ -0.37
RPRD2-202ENST00000369068 OFD1O75665 1012 aa12.73□□□□□ -0.37
RPRD2-202ENST00000369068 FSD1Q9BTV5 496 aa12.73□□□□□ -0.37
RPRD2-202ENST00000369068 CALCOCO1Q9P1Z2 691 aa12.73□□□□□ -0.37
RPRD2-202ENST00000369068 XPCQ01831 940 aaPredicted RBP12.73□□□□□ -0.37
RPRD2-202ENST00000369068 ANKRD1Q15327 319 aa12.73□□□□□ -0.37
RPRD2-202ENST00000369068 JMYQ8N9B5 988 aa12.73□□□□□ -0.37
RPRD2-202ENST00000369068 NUP62CLQ9H1M0 184 aa12.73□□□□□ -0.37
RPRD2-202ENST00000369068 GGNBP2Q9H3C7 697 aa12.73□□□□□ -0.37
RPRD2-202ENST00000369068 PIP4K2AP48426 406 aaPredicted RBP12.73□□□□□ -0.37
RPRD2-202ENST00000369068 C1orf115Q9H7X2 142 aa12.73□□□□□ -0.37
RPRD2-202ENST00000369068 DHX16O60231 1041 aaKnown RBP12.72□□□□□ -0.37
RPRD2-202ENST00000369068 HSP90AB3PQ58FF7 597 aa12.72□□□□□ -0.37
RPRD2-202ENST00000369068 MYO6Q9UM54 1294 aa12.72□□□□□ -0.37
RPRD2-202ENST00000369068 NCAPD3P42695 1498 aa12.72□□□□□ -0.37
RPRD2-202ENST00000369068 ANKRD50Q9ULJ7 1429 aa12.72□□□□□ -0.37
RPRD2-202ENST00000369068 FILIP1Q7Z7B0 1213 aa12.72□□□□□ -0.37
RPRD2-202ENST00000369068 CEP57L1Q8IYX8 460 aa12.72□□□□□ -0.37
RPRD2-202ENST00000369068 TWISTNBQ3B726 338 aaPredicted RBP12.72□□□□□ -0.37
RPRD2-202ENST00000369068 LARP1BQ659C4 914 aaKnown RBP12.72□□□□□ -0.37
RPRD2-202ENST00000369068 TMCO3Q6UWJ1 677 aa12.72□□□□□ -0.37
RPRD2-202ENST00000369068 TBC1D2Q9BYX2 928 aa12.72□□□□□ -0.37
RPRD2-202ENST00000369068 EID1Q9Y6B2 187 aa12.72□□□□□ -0.37
RPRD2-202ENST00000369068 DYNC1I1O14576 645 aa12.71□□□□□ -0.37
RPRD2-202ENST00000369068 EFCAB5A4FU69 1503 aa12.71□□□□□ -0.37
RPRD2-202ENST00000369068 PTPRGP23470 1445 aa12.71□□□□□ -0.37
RPRD2-202ENST00000369068 XBP1P17861 261 aa12.71□□□□□ -0.37
RPRD2-202ENST00000369068 C11orf95C9JLR9 678 aaPredicted RBP12.71□□□□□ -0.38
RPRD2-202ENST00000369068 CBFA2T2O43439 604 aa12.71□□□□□ -0.38
RPRD2-202ENST00000369068 GNAI2P04899 355 aa12.71□□□□□ -0.38
RPRD2-202ENST00000369068 SCAPERQ9BY12 1400 aa12.71□□□□□ -0.38
RPRD2-202ENST00000369068 GTF2E1P29083 439 aaPredicted RBP12.7□□□□□ -0.38
RPRD2-202ENST00000369068 SLFN5Q08AF3 891 aa12.7□□□□□ -0.38
RPRD2-202ENST00000369068 SKIDA1Q1XH10 827 aa12.7□□□□□ -0.38
RPRD2-202ENST00000369068 TTC5Q8N0Z6 440 aa12.7□□□□□ -0.38
RPRD2-202ENST00000369068 TSR2Q969E8 191 aaKnown RBP12.7□□□□□ -0.38
RPRD2-202ENST00000369068 BRMS1Q9HCU9 246 aa12.7□□□□□ -0.38
RPRD2-202ENST00000369068 GAPVD1Q14C86 1478 aa12.7□□□□□ -0.38
RPRD2-202ENST00000369068 PTPN14Q15678 1187 aa12.7□□□□□ -0.38
RPRD2-202ENST00000369068 MAP3K11Q16584 847 aa12.7□□□□□ -0.38
RPRD2-202ENST00000369068 PPFIBP1Q86W92 1011 aa12.7□□□□□ -0.38
RPRD2-202ENST00000369068 ME1P48163 572 aa12.69□□□□□ -0.38
RPRD2-202ENST00000369068 CEBPZQ03701 1054 aaKnown RBP12.69□□□□□ -0.38
RPRD2-202ENST00000369068 ZSCAN31Q96LW9 406 aaPredicted RBP12.69□□□□□ -0.38
RPRD2-202ENST00000369068 ZNF644Q9H582 1327 aaPredicted RBP12.69□□□□□ -0.38
RPRD2-202ENST00000369068 HFM1A2PYH4 1435 aa12.69□□□□□ -0.38
RPRD2-202ENST00000369068 TMX4Q9H1E5 349 aaPredicted RBP12.69□□□□□ -0.38
RPRD2-202ENST00000369068 AMOTL1Q8IY63 956 aa12.69□□□□□ -0.38
RPRD2-202ENST00000369068 KIF18AQ8NI77 898 aa12.69□□□□□ -0.38
RPRD2-202ENST00000369068 ZNF428Q96B54 188 aa12.69□□□□□ -0.38
RPRD2-202ENST00000369068 SPATA32Q96LK8 384 aa12.69□□□□□ -0.38
RPRD2-202ENST00000369068 CGNQ9P2M7 1197 aaKnown RBP12.69□□□□□ -0.38
RPRD2-202ENST00000369068 WASHC4Q2M389 1173 aa12.69□□□□□ -0.38
RPRD2-202ENST00000369068 SRCIN1Q9C0H9 1055 aa12.69□□□□□ -0.38
RPRD2-202ENST00000369068 ZNHIT6Q9NWK9 470 aaKnown RBP12.69□□□□□ -0.38
RPRD2-202ENST00000369068 CFAP45Q9UL16 551 aa12.69□□□□□ -0.38
RPRD2-202ENST00000369068 GOLGA6L10A6NI86 522 aa12.68□□□□□ -0.38
RPRD2-202ENST00000369068 TNPO1Q92973 898 aaKnown RBP12.68□□□□□ -0.38
RPRD2-202ENST00000369068 DACH1Q9UI36 760 aa12.68□□□□□ -0.38
RPRD2-202ENST00000369068 WDR97A6NE52 1622 aa12.68□□□□□ -0.38
RPRD2-202ENST00000369068 GOLGA6L7A0A1B0GV03 622 aa12.68□□□□□ -0.38
RPRD2-202ENST00000369068 CCDC30Q5VVM6 783 aa12.68□□□□□ -0.38
RPRD2-202ENST00000369068 FAM177A1Q8N128 213 aaPredicted RBP12.68□□□□□ -0.38
RPRD2-202ENST00000369068 NEUROD6Q96NK8 337 aa12.68□□□□□ -0.38
RPRD2-202ENST00000369068 LRRCC1Q9C099 1032 aa12.68□□□□□ -0.38
RPRD2-202ENST00000369068 PPP6R1Q9UPN7 881 aa12.68□□□□□ -0.38
RPRD2-202ENST00000369068 FGD5Q6ZNL6 1462 aa12.68□□□□□ -0.38
RPRD2-202ENST00000369068 PRKAR2BP31323 418 aa12.68□□□□□ -0.38
RPRD2-202ENST00000369068 UPF3BQ9BZI7 483 aaKnown RBP12.68□□□□□ -0.38
RPRD2-202ENST00000369068 BRPF1P55201 1214 aaPredicted RBP12.67□□□□□ -0.38
RPRD2-202ENST00000369068 GBP3Q9H0R5 595 aa12.67□□□□□ -0.38
RPRD2-202ENST00000369068 ERC1Q8IUD2 1116 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms