RNA–Protein interactions for RNA: ENST00000369047.8

ECM1-202, Transcript of extracellular matrix protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECM1, Length 2,070 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-202ENST00000369047 PLIN1O60240 522 aa17.2■□□□□ 0.34
ECM1-202ENST00000369047 MTHFSP49914 203 aa17.2■□□□□ 0.34
ECM1-202ENST00000369047 TCERG1O14776 1098 aaKnown RBP17.19■□□□□ 0.34
ECM1-202ENST00000369047 FAM135BQ49AJ0 1406 aa17.18■□□□□ 0.34
ECM1-202ENST00000369047 SAFB2Q14151 953 aaKnown RBP eCLIP17.18■□□□□ 0.34
ECM1-202ENST00000369047 CRBNQ96SW2 442 aa17.18■□□□□ 0.34
ECM1-202ENST00000369047 TMEM94Q12767 1356 aa17.18■□□□□ 0.34
ECM1-202ENST00000369047 A0A1W2PP64 1363 aa17.17■□□□□ 0.34
ECM1-202ENST00000369047 TNNT2P45379 298 aaPredicted RBP17.17■□□□□ 0.34
ECM1-202ENST00000369047 WWC1Q8IX03 1113 aa17.17■□□□□ 0.34
ECM1-202ENST00000369047 CCDC27Q2M243 656 aa17.16■□□□□ 0.34
ECM1-202ENST00000369047 MSH6P52701 1360 aa17.16■□□□□ 0.34
ECM1-202ENST00000369047 MS4A1P11836 297 aa17.16■□□□□ 0.34
ECM1-202ENST00000369047 WDR63Q8IWG1 891 aa17.16■□□□□ 0.34
ECM1-202ENST00000369047 MINK1Q8N4C8 1332 aaPredicted RBP17.15■□□□□ 0.34
ECM1-202ENST00000369047 XIRP1Q702N8 1843 aaKnown RBP17.15■□□□□ 0.34
ECM1-202ENST00000369047 HDGFL2Q7Z4V5 671 aaPredicted RBP17.15■□□□□ 0.34
ECM1-202ENST00000369047 C14orf37Q86TY3 774 aa17.15■□□□□ 0.34
ECM1-202ENST00000369047 PHF23Q9BUL5 403 aaPredicted RBP17.14■□□□□ 0.33
ECM1-202ENST00000369047 ANKRD26Q9UPS8 1709 aa17.14■□□□□ 0.33
ECM1-202ENST00000369047 CDK19Q9BWU1 502 aa17.14■□□□□ 0.33
ECM1-202ENST00000369047 SPINK5Q9NQ38 1064 aaPredicted RBP17.14■□□□□ 0.33
ECM1-202ENST00000369047 ROBO2Q9HCK4 1378 aa17.13■□□□□ 0.33
ECM1-202ENST00000369047 DCCP43146 1447 aa17.13■□□□□ 0.33
ECM1-202ENST00000369047 TCP11L2Q8N4U5 519 aa17.13■□□□□ 0.33
ECM1-202ENST00000369047 ADGRL3Q9HAR2 1447 aa17.13■□□□□ 0.33
ECM1-202ENST00000369047 CD163L1Q9NR16 1453 aa17.12■□□□□ 0.33
ECM1-202ENST00000369047 MSH5O43196 834 aa17.11■□□□□ 0.33
ECM1-202ENST00000369047 TOM1O60784 492 aa17.11■□□□□ 0.33
ECM1-202ENST00000369047 C20orf194Q5TEA3 1177 aa17.11■□□□□ 0.33
ECM1-202ENST00000369047 C19orf44Q9H6X5 657 aa17.11■□□□□ 0.33
ECM1-202ENST00000369047 FYB1O15117 783 aa17.11■□□□□ 0.33
ECM1-202ENST00000369047 PDE3AQ14432 1141 aa17.09■□□□□ 0.33
ECM1-202ENST00000369047 CENPQQ7L2Z9 268 aaPredicted RBP17.09■□□□□ 0.33
ECM1-202ENST00000369047 CADPS2Q86UW7 1296 aa17.09■□□□□ 0.33
ECM1-202ENST00000369047 NALCNQ8IZF0 1738 aa17.09■□□□□ 0.33
ECM1-202ENST00000369047 U2AF1L5P0DN76 240 aaPredicted RBP17.08■□□□□ 0.33
ECM1-202ENST00000369047 ATF3P18847 181 aa17.08■□□□□ 0.33
ECM1-202ENST00000369047 U2AF1Q01081 240 aaKnown RBP eCLIP17.08■□□□□ 0.33
ECM1-202ENST00000369047 ATP7BP35670 1465 aa17.08■□□□□ 0.33
ECM1-202ENST00000369047 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.08■□□□□ 0.32
ECM1-202ENST00000369047 CDC42BPGQ6DT37 1551 aa17.08■□□□□ 0.32
ECM1-202ENST00000369047 PNNQ9H307 717 aaKnown RBP17.08■□□□□ 0.32
ECM1-202ENST00000369047 GGNBP2Q9H3C7 697 aa17.08■□□□□ 0.32
ECM1-202ENST00000369047 CABP1Q9NZU7 370 aa17.08■□□□□ 0.32
ECM1-202ENST00000369047 KDM2BQ8NHM5 1336 aa17.06■□□□□ 0.32
ECM1-202ENST00000369047 ADGRB2O60241 1585 aa17.06■□□□□ 0.32
ECM1-202ENST00000369047 UBAP1LF5GYI3 381 aa17.06■□□□□ 0.32
ECM1-202ENST00000369047 KIF20BQ96Q89 1820 aa17.06■□□□□ 0.32
ECM1-202ENST00000369047 ANP32AP39687 249 aaKnown RBP17.05■□□□□ 0.32
ECM1-202ENST00000369047 NEUROD2Q15784 382 aa17.05■□□□□ 0.32
ECM1-202ENST00000369047 ERICH6Q7L0X2 663 aa17.05■□□□□ 0.32
ECM1-202ENST00000369047 WAPLQ7Z5K2 1190 aa17.05■□□□□ 0.32
ECM1-202ENST00000369047 MYH16Q9H6N6 1097 aa17.05■□□□□ 0.32
ECM1-202ENST00000369047 BCAR3O75815 825 aa17.05■□□□□ 0.32
ECM1-202ENST00000369047 AAMPQ13685 434 aa17.05■□□□□ 0.32
ECM1-202ENST00000369047 COL3A1P02461 1466 aaPredicted RBP17.04■□□□□ 0.32
ECM1-202ENST00000369047 PNPLA6Q8IY17 1366 aa17.04■□□□□ 0.32
ECM1-202ENST00000369047 FBXO41Q8TF61 875 aa17.04■□□□□ 0.32
ECM1-202ENST00000369047 RBM33Q96EV2 1170 aaKnown RBP17.04■□□□□ 0.32
ECM1-202ENST00000369047 WASLO00401 505 aaPredicted RBP17.03■□□□□ 0.32
ECM1-202ENST00000369047 CT47B1P0C2W7 299 aaPredicted RBP17.03■□□□□ 0.32
ECM1-202ENST00000369047 PDE4AP27815 886 aa17.03■□□□□ 0.32
ECM1-202ENST00000369047 RRP7AQ9Y3A4 280 aaKnown RBP17.03■□□□□ 0.32
ECM1-202ENST00000369047 PLEKHF1Q96S99 279 aa17.02■□□□□ 0.32
ECM1-202ENST00000369047 BACH2Q9BYV9 841 aa17.02■□□□□ 0.32
ECM1-202ENST00000369047 DIAPH1O60610 1272 aaKnown RBP17.01■□□□□ 0.31
ECM1-202ENST00000369047 RARSP54136 660 aaKnown RBP17.01■□□□□ 0.31
ECM1-202ENST00000369047 FMN2Q9NZ56 1722 aa17■□□□□ 0.31
ECM1-202ENST00000369047 CPSF1Q10570 1443 aaKnown RBP17■□□□□ 0.31
ECM1-202ENST00000369047 U2SURPO15042 1029 aaKnown RBP17■□□□□ 0.31
ECM1-202ENST00000369047 IPO9Q96P70 1041 aaKnown RBP17■□□□□ 0.31
ECM1-202ENST00000369047 EDC4Q6P2E9 1401 aaKnown RBP16.99■□□□□ 0.31
ECM1-202ENST00000369047 MAPK8IP3Q9UPT6 1336 aa16.99■□□□□ 0.31
ECM1-202ENST00000369047 CANXP27824 592 aaKnown RBP16.99■□□□□ 0.31
ECM1-202ENST00000369047 MST1RQ04912 1400 aa16.99■□□□□ 0.31
ECM1-202ENST00000369047 IL16Q14005 1332 aa16.99■□□□□ 0.31
ECM1-202ENST00000369047 SLAIN2Q9P270 581 aa16.98■□□□□ 0.31
ECM1-202ENST00000369047 ANKARQ7Z5J8 1434 aa16.98■□□□□ 0.31
ECM1-202ENST00000369047 FCHSD2O94868 740 aa16.98■□□□□ 0.31
ECM1-202ENST00000369047 TMPOP42166 694 aaKnown RBP16.98■□□□□ 0.31
ECM1-202ENST00000369047 PPIP5K1Q6PFW1 1433 aa16.97■□□□□ 0.31
ECM1-202ENST00000369047 ZNF692Q9BU19 519 aaPredicted RBP16.97■□□□□ 0.31
ECM1-202ENST00000369047 CCDC61Q9Y6R9 512 aa16.97■□□□□ 0.31
ECM1-202ENST00000369047 NOP58Q9Y2X3 529 aaKnown RBP16.96■□□□□ 0.31
ECM1-202ENST00000369047 C1orf167Q5SNV9 1468 aa16.95■□□□□ 0.3
ECM1-202ENST00000369047 NUDT16Q96DE0 195 aaKnown RBP16.95■□□□□ 0.3
ECM1-202ENST00000369047 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.95■□□□□ 0.3
ECM1-202ENST00000369047 KIF1AQ12756 1690 aa16.94■□□□□ 0.3
ECM1-202ENST00000369047 ROBO1Q9Y6N7 1651 aa16.94■□□□□ 0.3
ECM1-202ENST00000369047 PIP4K2BP78356 416 aa16.94■□□□□ 0.3
ECM1-202ENST00000369047 CLUAP1Q96AJ1 413 aa16.94■□□□□ 0.3
ECM1-202ENST00000369047 POLKQ9UBT6 870 aa16.94■□□□□ 0.3
ECM1-202ENST00000369047 AATKQ6ZMQ8 1374 aa16.94■□□□□ 0.3
ECM1-202ENST00000369047 ITSN1Q15811 1721 aa16.94■□□□□ 0.3
ECM1-202ENST00000369047 NEFMP07197 916 aa16.93■□□□□ 0.3
ECM1-202ENST00000369047 TRIM35Q9UPQ4 493 aa16.93■□□□□ 0.3
ECM1-202ENST00000369047 MAP2P11137 1827 aaKnown RBP16.92■□□□□ 0.3
ECM1-202ENST00000369047 FRAT1Q92837 279 aaPredicted RBP16.92■□□□□ 0.3
ECM1-202ENST00000369047 MON2Q7Z3U7 1717 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms