RNA–Protein interactions for RNA: ENST00000368902.1

SCNM1-201, Transcript of sodium channel modifier 1, humanhuman

TSL 2 BASIC

Gene SCNM1, Length 869 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-201ENST00000368902 RGPD1P0DJD0 1748 aa12.59□□□□□ -0.39
SCNM1-201ENST00000368902 HIRIP3Q9BW71 556 aaPredicted RBP12.58□□□□□ -0.4
SCNM1-201ENST00000368902 COL14A1Q05707 1796 aaKnown RBP12.58□□□□□ -0.4
SCNM1-201ENST00000368902 MINK1Q8N4C8 1332 aaPredicted RBP12.58□□□□□ -0.4
SCNM1-201ENST00000368902 ALS2Q96Q42 1657 aa12.57□□□□□ -0.4
SCNM1-201ENST00000368902 THSD7AQ9UPZ6 1657 aa12.57□□□□□ -0.4
SCNM1-201ENST00000368902 ADGRB1O14514 1584 aa12.56□□□□□ -0.4
SCNM1-201ENST00000368902 ONECUT3O60422 494 aaPredicted RBP12.56□□□□□ -0.4
SCNM1-201ENST00000368902 BAG6P46379 1132 aa12.56□□□□□ -0.4
SCNM1-201ENST00000368902 CRYBG1Q9Y4K1 1723 aa12.56□□□□□ -0.4
SCNM1-201ENST00000368902 TULP4Q9NRJ4 1543 aa12.56□□□□□ -0.4
SCNM1-201ENST00000368902 EIF3AQ14152 1382 aaKnown RBP12.56□□□□□ -0.4
SCNM1-201ENST00000368902 TNS1Q9HBL0 1735 aaKnown RBP12.55□□□□□ -0.4
SCNM1-201ENST00000368902 PSDA5PKW4 1024 aaPredicted RBP12.55□□□□□ -0.4
SCNM1-201ENST00000368902 WASLO00401 505 aaPredicted RBP12.55□□□□□ -0.4
SCNM1-201ENST00000368902 FAM98CQ17RN3 349 aaKnown RBP12.54□□□□□ -0.4
SCNM1-201ENST00000368902 GPRASP1Q5JY77 1395 aa12.54□□□□□ -0.4
SCNM1-201ENST00000368902 NBPF8Q3BBV2 869 aa12.53□□□□□ -0.4
SCNM1-201ENST00000368902 PMFBP1Q8TBY8 1022 aa12.53□□□□□ -0.4
SCNM1-201ENST00000368902 BTG4Q9NY30 223 aa12.53□□□□□ -0.4
SCNM1-201ENST00000368902 TONSLQ96HA7 1378 aa12.53□□□□□ -0.4
SCNM1-201ENST00000368902 DISP2A7MBM2 1401 aa12.53□□□□□ -0.4
SCNM1-201ENST00000368902 FAM83GA6ND36 823 aa12.52□□□□□ -0.41
SCNM1-201ENST00000368902 CDK19Q9BWU1 502 aa12.51□□□□□ -0.41
SCNM1-201ENST00000368902 PHRF1Q9P1Y6 1649 aaKnown RBP12.51□□□□□ -0.41
SCNM1-201ENST00000368902 ITSN1Q15811 1721 aa12.51□□□□□ -0.41
SCNM1-201ENST00000368902 PRR36Q9H6K5 1346 aa12.5□□□□□ -0.41
SCNM1-201ENST00000368902 CENPJQ9HC77 1338 aaPredicted RBP12.5□□□□□ -0.41
SCNM1-201ENST00000368902 ATP7BP35670 1465 aa12.49□□□□□ -0.41
SCNM1-201ENST00000368902 ROCK2O75116 1388 aaKnown RBP12.49□□□□□ -0.41
SCNM1-201ENST00000368902 SPATA31A5Q5VU36 1347 aa12.49□□□□□ -0.41
SCNM1-201ENST00000368902 SPATA31A7Q8IWB4 1347 aa12.49□□□□□ -0.41
SCNM1-201ENST00000368902 NUDT16Q96DE0 195 aaKnown RBP12.49□□□□□ -0.41
SCNM1-201ENST00000368902 EN1Q05925 392 aaPredicted RBP12.48□□□□□ -0.41
SCNM1-201ENST00000368902 FAM182BQ5T319 152 aa12.48□□□□□ -0.41
SCNM1-201ENST00000368902 NGDNQ8NEJ9 315 aaKnown RBP12.48□□□□□ -0.41
SCNM1-201ENST00000368902 PRDM11Q9NQV5 511 aa12.48□□□□□ -0.41
SCNM1-201ENST00000368902 ARHGEF28Q8N1W1 1705 aaKnown RBP12.48□□□□□ -0.41
SCNM1-201ENST00000368902 R3HDM1Q15032 1099 aaKnown RBP12.47□□□□□ -0.41
SCNM1-201ENST00000368902 CARD11Q9BXL7 1154 aa12.47□□□□□ -0.41
SCNM1-201ENST00000368902 CCDC61Q9Y6R9 512 aa12.47□□□□□ -0.41
SCNM1-201ENST00000368902 NRKQ7Z2Y5 1582 aa12.47□□□□□ -0.41
SCNM1-201ENST00000368902 KIAA0232Q92628 1395 aa12.46□□□□□ -0.41
SCNM1-201ENST00000368902 TOPAZ1Q8N9V7 1692 aa12.46□□□□□ -0.41
SCNM1-201ENST00000368902 RREB1Q92766 1687 aa12.46□□□□□ -0.41
SCNM1-201ENST00000368902 SRPK2P78362 688 aaKnown RBP12.46□□□□□ -0.41
SCNM1-201ENST00000368902 PARD3Q8TEW0 1356 aa12.45□□□□□ -0.42
SCNM1-201ENST00000368902 CLSPNQ9HAW4 1339 aa12.45□□□□□ -0.42
SCNM1-201ENST00000368902 PAK3O75914 559 aaPredicted RBP12.45□□□□□ -0.42
SCNM1-201ENST00000368902 CABP2Q9NPB3 220 aa12.45□□□□□ -0.42
SCNM1-201ENST00000368902 NUP188Q5SRE5 1749 aa12.45□□□□□ -0.42
SCNM1-201ENST00000368902 SPATA31A1Q5TZJ5 1347 aa12.44□□□□□ -0.42
SCNM1-201ENST00000368902 CCER1Q8TC90 406 aaPredicted RBP12.44□□□□□ -0.42
SCNM1-201ENST00000368902 PLEKHG3A1L390 1219 aa12.43□□□□□ -0.42
SCNM1-201ENST00000368902 TIMELESSQ9UNS1 1208 aa12.43□□□□□ -0.42
SCNM1-201ENST00000368902 SSH2Q76I76 1423 aa12.43□□□□□ -0.42
SCNM1-201ENST00000368902 EVC2Q86UK5 1308 aa12.42□□□□□ -0.42
SCNM1-201ENST00000368902 EZH2Q15910 746 aaKnown RBP12.42□□□□□ -0.42
SCNM1-201ENST00000368902 STRN4Q9NRL3 753 aa12.42□□□□□ -0.42
SCNM1-201ENST00000368902 KIAA1210Q9ULL0 1709 aa12.42□□□□□ -0.42
SCNM1-201ENST00000368902 TRIM37O94972 964 aa12.41□□□□□ -0.42
SCNM1-201ENST00000368902 CHRNA2Q15822 529 aa12.41□□□□□ -0.42
SCNM1-201ENST00000368902 LMO7Q8WWI1 1683 aa12.41□□□□□ -0.42
SCNM1-201ENST00000368902 ACEP12821 1306 aa12.4□□□□□ -0.42
SCNM1-201ENST00000368902 FAM196AQ6ZSG2 479 aa12.4□□□□□ -0.42
SCNM1-201ENST00000368902 CAMKK2Q96RR4 588 aa12.4□□□□□ -0.42
SCNM1-201ENST00000368902 CABP1Q9NZU7 370 aa12.4□□□□□ -0.42
SCNM1-201ENST00000368902 USP35Q9P2H5 1018 aa12.39□□□□□ -0.43
SCNM1-201ENST00000368902 POLR3AO14802 1390 aaPredicted RBP12.39□□□□□ -0.43
SCNM1-201ENST00000368902 PARP4Q9UKK3 1724 aaKnown RBP12.38□□□□□ -0.43
SCNM1-201ENST00000368902 APBA3O96018 575 aa12.38□□□□□ -0.43
SCNM1-201ENST00000368902 ZC3H6P61129 1189 aaKnown RBP12.38□□□□□ -0.43
SCNM1-201ENST00000368902 CAMTA1Q9Y6Y1 1673 aa12.38□□□□□ -0.43
SCNM1-201ENST00000368902 NUTM2GQ5VZR2 741 aa12.37□□□□□ -0.43
SCNM1-201ENST00000368902 CPDO75976 1380 aa12.37□□□□□ -0.43
SCNM1-201ENST00000368902 LRRC37A3O60309 1634 aa12.37□□□□□ -0.43
SCNM1-201ENST00000368902 USP19O94966 1318 aa12.37□□□□□ -0.43
SCNM1-201ENST00000368902 COL5A2P05997 1499 aaPredicted RBP12.36□□□□□ -0.43
SCNM1-201ENST00000368902 BRD4O60885 1362 aaPredicted RBP12.36□□□□□ -0.43
SCNM1-201ENST00000368902 ST20-MTHFSA0A0A6YYL1 179 aa12.36□□□□□ -0.43
SCNM1-201ENST00000368902 PDE3BQ13370 1112 aa12.36□□□□□ -0.43
SCNM1-201ENST00000368902 BARGINQ6ZT62 677 aa12.36□□□□□ -0.43
SCNM1-201ENST00000368902 PPIP5K1Q6PFW1 1433 aa12.36□□□□□ -0.43
SCNM1-201ENST00000368902 RGPD3A6NKT7 1758 aaPredicted RBP12.35□□□□□ -0.43
SCNM1-201ENST00000368902 RGPD4Q7Z3J3 1758 aa12.35□□□□□ -0.43
SCNM1-201ENST00000368902 SLC24A1O60721 1099 aa12.35□□□□□ -0.43
SCNM1-201ENST00000368902 EVA1CP58658 441 aa12.35□□□□□ -0.43
SCNM1-201ENST00000368902 ABTB2Q8N961 1025 aa12.35□□□□□ -0.43
SCNM1-201ENST00000368902 ZNF692Q9BU19 519 aaPredicted RBP12.35□□□□□ -0.43
SCNM1-201ENST00000368902 TRPM1Q7Z4N2 1603 aa12.35□□□□□ -0.43
SCNM1-201ENST00000368902 OVOS2A0A0G2JMS6 1433 aa12.35□□□□□ -0.43
SCNM1-201ENST00000368902 OVOS2A0A0J9YW53 1432 aa12.35□□□□□ -0.43
SCNM1-201ENST00000368902 OVOS2Q6IE36 1432 aa12.35□□□□□ -0.43
SCNM1-201ENST00000368902 C11orf95C9JLR9 678 aaPredicted RBP12.34□□□□□ -0.43
SCNM1-201ENST00000368902 LARP1Q6PKG0 1096 aaKnown RBP12.34□□□□□ -0.43
SCNM1-201ENST00000368902 TCP11L2Q8N4U5 519 aa12.34□□□□□ -0.43
SCNM1-201ENST00000368902 PEAK1Q9H792 1746 aa12.34□□□□□ -0.43
SCNM1-201ENST00000368902 SBNO2Q9Y2G9 1366 aa12.33□□□□□ -0.44
SCNM1-201ENST00000368902 NINLQ9Y2I6 1382 aa12.33□□□□□ -0.44
SCNM1-201ENST00000368902 NBPF14Q5TI25 921 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms