RNA–Protein interactions for RNA: ENST00000368881.8

PSMD4-201, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 5 BASIC

Gene PSMD4, Length 1,333 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-201ENST00000368881 SSH2Q76I76 1423 aa23.67■■□□□ 1.38
PSMD4-201ENST00000368881 MTHFSP49914 203 aa23.65■■□□□ 1.38
PSMD4-201ENST00000368881 C19orf44Q9H6X5 657 aa23.65■■□□□ 1.38
PSMD4-201ENST00000368881 DMRT2Q9Y5R5 561 aa23.65■■□□□ 1.38
PSMD4-201ENST00000368881 KIF1AQ12756 1690 aa23.65■■□□□ 1.38
PSMD4-201ENST00000368881 NUTM2FA1L443 756 aa23.64■■□□□ 1.38
PSMD4-201ENST00000368881 NGEFQ8N5V2 710 aa23.64■■□□□ 1.38
PSMD4-201ENST00000368881 STRCP1A6NGW2 1772 aa23.64■■□□□ 1.37
PSMD4-201ENST00000368881 LRRC7Q96NW7 1537 aa23.64■■□□□ 1.37
PSMD4-201ENST00000368881 TNNT2P45379 298 aaPredicted RBP23.63■■□□□ 1.37
PSMD4-201ENST00000368881 SHPRHQ149N8 1683 aa23.63■■□□□ 1.37
PSMD4-201ENST00000368881 SMG6Q86US8 1419 aaKnown RBP23.63■■□□□ 1.37
PSMD4-201ENST00000368881 PHF8Q9UPP1 1060 aa23.62■■□□□ 1.37
PSMD4-201ENST00000368881 USP54Q70EL1 1684 aa23.62■■□□□ 1.37
PSMD4-201ENST00000368881 OVOS2A0A0J9YW53 1432 aa23.62■■□□□ 1.37
PSMD4-201ENST00000368881 OVOS2Q6IE36 1432 aa23.62■■□□□ 1.37
PSMD4-201ENST00000368881 NUDCQ9Y266 331 aa23.61■■□□□ 1.37
PSMD4-201ENST00000368881 USP31Q70CQ4 1352 aa23.61■■□□□ 1.37
PSMD4-201ENST00000368881 NME9Q86XW9 330 aa23.6■■□□□ 1.37
PSMD4-201ENST00000368881 ADAMTS8Q9UP79 889 aa23.6■■□□□ 1.37
PSMD4-201ENST00000368881 TMEM94Q12767 1356 aa23.6■■□□□ 1.37
PSMD4-201ENST00000368881 PMFBP1Q8TBY8 1022 aa23.59■■□□□ 1.37
PSMD4-201ENST00000368881 PNPLA6Q8IY17 1366 aa23.59■■□□□ 1.37
PSMD4-201ENST00000368881 PDE3BQ13370 1112 aa23.59■■□□□ 1.37
PSMD4-201ENST00000368881 CDK12Q9NYV4 1490 aaPredicted RBP23.58■■□□□ 1.37
PSMD4-201ENST00000368881 MAP2P11137 1827 aaKnown RBP23.58■■□□□ 1.36
PSMD4-201ENST00000368881 ATF3P18847 181 aa23.57■■□□□ 1.36
PSMD4-201ENST00000368881 MSH6P52701 1360 aa23.57■■□□□ 1.36
PSMD4-201ENST00000368881 COL3A1P02461 1466 aaPredicted RBP23.56■■□□□ 1.36
PSMD4-201ENST00000368881 CADPS2Q86UW7 1296 aa23.56■■□□□ 1.36
PSMD4-201ENST00000368881 PNNQ9H307 717 aaKnown RBP23.55■■□□□ 1.36
PSMD4-201ENST00000368881 C1orf167Q5SNV9 1468 aa23.54■■□□□ 1.36
PSMD4-201ENST00000368881 ESCO1Q5FWF5 840 aa23.54■■□□□ 1.36
PSMD4-201ENST00000368881 PIK3C2AO00443 1686 aa23.53■■□□□ 1.36
PSMD4-201ENST00000368881 POLKQ9UBT6 870 aa23.53■■□□□ 1.36
PSMD4-201ENST00000368881 NCBP3Q53F19 620 aaKnown RBP23.52■■□□□ 1.36
PSMD4-201ENST00000368881 RBM33Q96EV2 1170 aaKnown RBP23.52■■□□□ 1.36
PSMD4-201ENST00000368881 MST1RQ04912 1400 aa23.51■■□□□ 1.35
PSMD4-201ENST00000368881 DIAPH1O60610 1272 aaKnown RBP23.51■■□□□ 1.35
PSMD4-201ENST00000368881 KIF24Q5T7B8 1368 aa23.49■■□□□ 1.35
PSMD4-201ENST00000368881 XIRP1Q702N8 1843 aaKnown RBP23.49■■□□□ 1.35
PSMD4-201ENST00000368881 PSME1Q06323 249 aa23.48■■□□□ 1.35
PSMD4-201ENST00000368881 RUNDC1Q96C34 613 aa23.48■■□□□ 1.35
PSMD4-201ENST00000368881 ZRANB1Q9UGI0 708 aa23.46■■□□□ 1.35
PSMD4-201ENST00000368881 U2AF1L5P0DN76 240 aaPredicted RBP23.45■■□□□ 1.34
PSMD4-201ENST00000368881 U2AF1Q01081 240 aaKnown RBP eCLIP23.45■■□□□ 1.34
PSMD4-201ENST00000368881 ABTB2Q8N961 1025 aa23.44■■□□□ 1.34
PSMD4-201ENST00000368881 NLRP6P59044 892 aa23.43■■□□□ 1.34
PSMD4-201ENST00000368881 TRPM3Q9HCF6 1732 aaPredicted RBP23.43■■□□□ 1.34
PSMD4-201ENST00000368881 MARF1Q9Y4F3 1742 aaKnown RBP23.43■■□□□ 1.34
PSMD4-201ENST00000368881 ZNF335Q9H4Z2 1342 aaPredicted RBP23.43■■□□□ 1.34
PSMD4-201ENST00000368881 IQSEC2Q5JU85 1478 aa23.42■■□□□ 1.34
PSMD4-201ENST00000368881 PAK3O75914 559 aaPredicted RBP23.42■■□□□ 1.34
PSMD4-201ENST00000368881 GTF3C3Q9Y5Q9 886 aa23.42■■□□□ 1.34
PSMD4-201ENST00000368881 SBNO1A3KN83 1393 aa23.41■■□□□ 1.34
PSMD4-201ENST00000368881 PPM1GO15355 546 aaPredicted RBP23.41■■□□□ 1.34
PSMD4-201ENST00000368881 ORAI2Q96SN7 254 aa23.41■■□□□ 1.34
PSMD4-201ENST00000368881 EMILIN1Q9Y6C2 1016 aa23.41■■□□□ 1.34
PSMD4-201ENST00000368881 U2SURPO15042 1029 aaKnown RBP23.4■■□□□ 1.34
PSMD4-201ENST00000368881 FCHSD2O94868 740 aa23.4■■□□□ 1.34
PSMD4-201ENST00000368881 NEFMP07197 916 aa23.4■■□□□ 1.34
PSMD4-201ENST00000368881 KCNH5Q8NCM2 988 aa23.4■■□□□ 1.34
PSMD4-201ENST00000368881 NPHP3Q7Z494 1330 aa23.4■■□□□ 1.34
PSMD4-201ENST00000368881 RTL1A6NKG5 1358 aa23.4■■□□□ 1.34
PSMD4-201ENST00000368881 FLT4P35916 1363 aa23.4■■□□□ 1.34
PSMD4-201ENST00000368881 APAF1O14727 1248 aa23.39■■□□□ 1.34
PSMD4-201ENST00000368881 CCDC146Q8IYE0 955 aa23.39■■□□□ 1.34
PSMD4-201ENST00000368881 NEFLP07196 543 aa23.38■■□□□ 1.33
PSMD4-201ENST00000368881 RRS1Q15050 365 aaKnown RBP23.38■■□□□ 1.33
PSMD4-201ENST00000368881 MAPK8IP3Q9UPT6 1336 aa23.38■■□□□ 1.33
PSMD4-201ENST00000368881 CCDC27Q2M243 656 aa23.37■■□□□ 1.33
PSMD4-201ENST00000368881 ZNF521Q96K83 1311 aa23.37■■□□□ 1.33
PSMD4-201ENST00000368881 FOXO3O43524 673 aa23.36■■□□□ 1.33
PSMD4-201ENST00000368881 IL13P35225 146 aa23.36■■□□□ 1.33
PSMD4-201ENST00000368881 KRT28Q7Z3Y7 464 aa23.36■■□□□ 1.33
PSMD4-201ENST00000368881 PHRF1Q9P1Y6 1649 aaKnown RBP23.36■■□□□ 1.33
PSMD4-201ENST00000368881 SLIT3O75094 1523 aa23.36■■□□□ 1.33
PSMD4-201ENST00000368881 GOLGA2Q08379 1002 aa23.35■■□□□ 1.33
PSMD4-201ENST00000368881 ALS2Q96Q42 1657 aa23.35■■□□□ 1.33
PSMD4-201ENST00000368881 PEAK1Q9H792 1746 aa23.35■■□□□ 1.33
PSMD4-201ENST00000368881 MAP3K19Q56UN5 1328 aa23.34■■□□□ 1.33
PSMD4-201ENST00000368881 AEBP2Q6ZN18 517 aaPredicted RBP23.33■■□□□ 1.33
PSMD4-201ENST00000368881 TCP11L2Q8N4U5 519 aa23.33■■□□□ 1.33
PSMD4-201ENST00000368881 SALL2Q9Y467 1007 aaPredicted RBP23.33■■□□□ 1.33
PSMD4-201ENST00000368881 AMPHP49418 695 aa23.33■■□□□ 1.32
PSMD4-201ENST00000368881 PLEKHF1Q96S99 279 aa23.33■■□□□ 1.32
PSMD4-201ENST00000368881 NFAT5O94916 1531 aa23.32■■□□□ 1.32
PSMD4-201ENST00000368881 FBLN1P23142 703 aa23.32■■□□□ 1.32
PSMD4-201ENST00000368881 USP19O94966 1318 aa23.31■■□□□ 1.32
PSMD4-201ENST00000368881 LTN1O94822 1766 aa23.3■■□□□ 1.32
PSMD4-201ENST00000368881 RGPD1P0DJD0 1748 aa23.3■■□□□ 1.32
PSMD4-201ENST00000368881 ARHGEF10O15013 1369 aa23.3■■□□□ 1.32
PSMD4-201ENST00000368881 E9PSI1 815 aa23.3■■□□□ 1.32
PSMD4-201ENST00000368881 WDR63Q8IWG1 891 aa23.3■■□□□ 1.32
PSMD4-201ENST00000368881 PHF23Q9BUL5 403 aaPredicted RBP23.3■■□□□ 1.32
PSMD4-201ENST00000368881 RSPH6AQ9H0K4 717 aa23.3■■□□□ 1.32
PSMD4-201ENST00000368881 TNS3Q68CZ2 1445 aa23.28■■□□□ 1.32
PSMD4-201ENST00000368881 EIF4A2Q14240 407 aaKnown RBP23.28■■□□□ 1.32
PSMD4-201ENST00000368881 PXDNQ92626 1479 aa23.27■■□□□ 1.32
PSMD4-201ENST00000368881 WWC1Q8IX03 1113 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms