RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 EP400Q96L91 3159 aa12.42□□□□□ -0.42
SNX27-201ENST00000368838 HIRIP3Q9BW71 556 aaPredicted RBP12.41□□□□□ -0.42
SNX27-201ENST00000368838 GPRASP1Q5JY77 1395 aa12.41□□□□□ -0.42
SNX27-201ENST00000368838 ARHGEF28Q8N1W1 1705 aaKnown RBP12.41□□□□□ -0.42
SNX27-201ENST00000368838 TRPM3Q9HCF6 1732 aaPredicted RBP12.41□□□□□ -0.42
SNX27-201ENST00000368838 SPATA31A3Q5VYP0 1347 aa12.41□□□□□ -0.42
SNX27-201ENST00000368838 PMFBP1Q8TBY8 1022 aa12.4□□□□□ -0.42
SNX27-201ENST00000368838 POGKQ9P215 609 aa12.4□□□□□ -0.42
SNX27-201ENST00000368838 PHF8Q9UPP1 1060 aa12.4□□□□□ -0.42
SNX27-201ENST00000368838 TRAK1Q9UPV9 953 aa12.4□□□□□ -0.42
SNX27-201ENST00000368838 RALGAPBQ86X10 1494 aa12.4□□□□□ -0.42
SNX27-201ENST00000368838 ADGRB1O14514 1584 aa12.4□□□□□ -0.42
SNX27-201ENST00000368838 HAP1P54257 671 aaPredicted RBP12.39□□□□□ -0.43
SNX27-201ENST00000368838 ATAD2Q6PL18 1390 aa12.39□□□□□ -0.43
SNX27-201ENST00000368838 NWD2Q9ULI1 1742 aa12.39□□□□□ -0.43
SNX27-201ENST00000368838 DLC1Q96QB1 1528 aa12.39□□□□□ -0.43
SNX27-201ENST00000368838 MINK1Q8N4C8 1332 aaPredicted RBP12.39□□□□□ -0.43
SNX27-201ENST00000368838 ADGRB2O60241 1585 aa12.39□□□□□ -0.43
SNX27-201ENST00000368838 DCAF11Q8TEB1 546 aa12.38□□□□□ -0.43
SNX27-201ENST00000368838 ITSN1Q15811 1721 aa12.38□□□□□ -0.43
SNX27-201ENST00000368838 TNS3Q68CZ2 1445 aa12.38□□□□□ -0.43
SNX27-201ENST00000368838 ALS2Q96Q42 1657 aa12.38□□□□□ -0.43
SNX27-201ENST00000368838 NRAPQ86VF7 1730 aa12.38□□□□□ -0.43
SNX27-201ENST00000368838 PSME1Q06323 249 aa12.37□□□□□ -0.43
SNX27-201ENST00000368838 NBPF8Q3BBV2 869 aa12.37□□□□□ -0.43
SNX27-201ENST00000368838 GJD4Q96KN9 370 aaPredicted RBP12.37□□□□□ -0.43
SNX27-201ENST00000368838 CRYBG1Q9Y4K1 1723 aa12.37□□□□□ -0.43
SNX27-201ENST00000368838 SLIT2O94813 1529 aa12.37□□□□□ -0.43
SNX27-201ENST00000368838 SIRT1Q96EB6 747 aa12.37□□□□□ -0.43
SNX27-201ENST00000368838 UNC5CLQ8IV45 518 aa12.36□□□□□ -0.43
SNX27-201ENST00000368838 EIF4G2P78344 907 aaKnown RBP eCLIP12.35□□□□□ -0.43
SNX27-201ENST00000368838 CCDC9Q9Y3X0 531 aaKnown RBP12.35□□□□□ -0.43
SNX27-201ENST00000368838 PRR36Q9H6K5 1346 aa12.34□□□□□ -0.43
SNX27-201ENST00000368838 ANKARQ7Z5J8 1434 aa12.33□□□□□ -0.44
SNX27-201ENST00000368838 SPINK5Q9NQ38 1064 aaPredicted RBP12.33□□□□□ -0.44
SNX27-201ENST00000368838 KIAA1210Q9ULL0 1709 aa12.33□□□□□ -0.44
SNX27-201ENST00000368838 TULP4Q9NRJ4 1543 aa12.33□□□□□ -0.44
SNX27-201ENST00000368838 COL14A1Q05707 1796 aaKnown RBP12.32□□□□□ -0.44
SNX27-201ENST00000368838 SBNO1A3KN83 1393 aa12.32□□□□□ -0.44
SNX27-201ENST00000368838 PHRF1Q9P1Y6 1649 aaKnown RBP12.31□□□□□ -0.44
SNX27-201ENST00000368838 FAM83GA6ND36 823 aa12.31□□□□□ -0.44
SNX27-201ENST00000368838 TOPAZ1Q8N9V7 1692 aa12.31□□□□□ -0.44
SNX27-201ENST00000368838 ARHGEF10O15013 1369 aa12.3□□□□□ -0.44
SNX27-201ENST00000368838 TRPM1Q7Z4N2 1603 aa12.3□□□□□ -0.44
SNX27-201ENST00000368838 A0A0G2JS52 829 aa12.3□□□□□ -0.44
SNX27-201ENST00000368838 WASLO00401 505 aaPredicted RBP12.3□□□□□ -0.44
SNX27-201ENST00000368838 PAK3O75914 559 aaPredicted RBP12.3□□□□□ -0.44
SNX27-201ENST00000368838 MYT1Q01538 1121 aa12.3□□□□□ -0.44
SNX27-201ENST00000368838 SEPT12Q8IYM1 358 aa12.3□□□□□ -0.44
SNX27-201ENST00000368838 VPS72Q15906 364 aa12.29□□□□□ -0.44
SNX27-201ENST00000368838 NGDNQ8NEJ9 315 aaKnown RBP12.29□□□□□ -0.44
SNX27-201ENST00000368838 QRICH2Q9H0J4 1663 aa12.28□□□□□ -0.44
SNX27-201ENST00000368838 C1QBPQ07021 282 aaKnown RBP12.28□□□□□ -0.44
SNX27-201ENST00000368838 NUTM2GQ5VZR2 741 aa12.28□□□□□ -0.44
SNX27-201ENST00000368838 DIEXFQ68CQ4 756 aaKnown RBP12.28□□□□□ -0.44
SNX27-201ENST00000368838 DEFB132Q7Z7B7 95 aa12.28□□□□□ -0.44
SNX27-201ENST00000368838 BTG4Q9NY30 223 aa12.28□□□□□ -0.44
SNX27-201ENST00000368838 ATP7BP35670 1465 aa12.28□□□□□ -0.44
SNX27-201ENST00000368838 POLA2Q14181 598 aa12.27□□□□□ -0.45
SNX27-201ENST00000368838 ZRANB1Q9UGI0 708 aa12.27□□□□□ -0.45
SNX27-201ENST00000368838 EIF3AQ14152 1382 aaKnown RBP12.26□□□□□ -0.45
SNX27-201ENST00000368838 USP47Q96K76 1375 aa12.26□□□□□ -0.45
SNX27-201ENST00000368838 HSPA5P11021 654 aaKnown RBP12.26□□□□□ -0.45
SNX27-201ENST00000368838 FAM98CQ17RN3 349 aaKnown RBP12.26□□□□□ -0.45
SNX27-201ENST00000368838 FAM182BQ5T319 152 aa12.26□□□□□ -0.45
SNX27-201ENST00000368838 NUDT16Q96DE0 195 aaKnown RBP12.26□□□□□ -0.45
SNX27-201ENST00000368838 SRCAPQ6ZRS2 3230 aa12.26□□□□□ -0.45
SNX27-201ENST00000368838 RGPD1P0DJD0 1748 aa12.25□□□□□ -0.45
SNX27-201ENST00000368838 BLMP54132 1417 aaPredicted RBP12.25□□□□□ -0.45
SNX27-201ENST00000368838 NBPF1Q3BBV0 1214 aa12.25□□□□□ -0.45
SNX27-201ENST00000368838 CDK19Q9BWU1 502 aa12.25□□□□□ -0.45
SNX27-201ENST00000368838 ROCK2O75116 1388 aaKnown RBP12.24□□□□□ -0.45
SNX27-201ENST00000368838 CHRNA2Q15822 529 aa12.24□□□□□ -0.45
SNX27-201ENST00000368838 KRT27Q7Z3Y8 459 aa12.24□□□□□ -0.45
SNX27-201ENST00000368838 CCDC125Q86Z20 511 aa12.24□□□□□ -0.45
SNX27-201ENST00000368838 CARD11Q9BXL7 1154 aa12.24□□□□□ -0.45
SNX27-201ENST00000368838 TNS1Q9HBL0 1735 aaKnown RBP12.23□□□□□ -0.45
SNX27-201ENST00000368838 SBNO2Q9Y2G9 1366 aa12.23□□□□□ -0.45
SNX27-201ENST00000368838 THSD7AQ9UPZ6 1657 aa12.23□□□□□ -0.45
SNX27-201ENST00000368838 NRKQ7Z2Y5 1582 aa12.22□□□□□ -0.45
SNX27-201ENST00000368838 ZC3H6P61129 1189 aaKnown RBP12.22□□□□□ -0.45
SNX27-201ENST00000368838 SF3B2Q13435 895 aaKnown RBP12.22□□□□□ -0.45
SNX27-201ENST00000368838 PRDM11Q9NQV5 511 aa12.22□□□□□ -0.45
SNX27-201ENST00000368838 RGPD5Q99666 1765 aa12.22□□□□□ -0.45
SNX27-201ENST00000368838 KIAA0232Q92628 1395 aa12.22□□□□□ -0.45
SNX27-201ENST00000368838 ACEP12821 1306 aa12.21□□□□□ -0.45
SNX27-201ENST00000368838 STRN4Q9NRL3 753 aa12.21□□□□□ -0.45
SNX27-201ENST00000368838 ONECUT3O60422 494 aaPredicted RBP12.2□□□□□ -0.46
SNX27-201ENST00000368838 PRKCSHP14314 528 aaPredicted RBP12.2□□□□□ -0.46
SNX27-201ENST00000368838 CCDC7Q96M83 1385 aa12.2□□□□□ -0.46
SNX27-201ENST00000368838 SPATA31A5Q5VU36 1347 aa12.19□□□□□ -0.46
SNX27-201ENST00000368838 SPATA31A7Q8IWB4 1347 aa12.19□□□□□ -0.46
SNX27-201ENST00000368838 PSDA5PKW4 1024 aaPredicted RBP12.19□□□□□ -0.46
SNX27-201ENST00000368838 CABP2Q9NPB3 220 aa12.19□□□□□ -0.46
SNX27-201ENST00000368838 USP35Q9P2H5 1018 aa12.19□□□□□ -0.46
SNX27-201ENST00000368838 WASHC2AQ641Q2 1341 aa12.19□□□□□ -0.46
SNX27-201ENST00000368838 PPIP5K1Q6PFW1 1433 aa12.18□□□□□ -0.46
SNX27-201ENST00000368838 SRPK2P78362 688 aaKnown RBP12.18□□□□□ -0.46
SNX27-201ENST00000368838 LMO7Q8WWI1 1683 aa12.18□□□□□ -0.46
SNX27-201ENST00000368838 CAMTA1Q9Y6Y1 1673 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms