RNA–Protein interactions for RNA: ENST00000368657.7

TUBE1-201, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-201ENST00000368657 SLC4A1APQ9BWU0 796 aaKnown RBP16.16■□□□□ 0.18
TUBE1-201ENST00000368657 C11orf95C9JLR9 678 aaPredicted RBP16.15■□□□□ 0.18
TUBE1-201ENST00000368657 ZBTB7AO95365 584 aa16.15■□□□□ 0.18
TUBE1-201ENST00000368657 HSPA6P17066 643 aa16.15■□□□□ 0.18
TUBE1-201ENST00000368657 NAIPQ13075 1403 aa16.14■□□□□ 0.17
TUBE1-201ENST00000368657 GPR162Q16538 588 aa16.14■□□□□ 0.17
TUBE1-201ENST00000368657 ATF5Q9Y2D1 282 aaPredicted RBP16.14■□□□□ 0.17
TUBE1-201ENST00000368657 KIF1AQ12756 1690 aa16.14■□□□□ 0.17
TUBE1-201ENST00000368657 SPATA31A1Q5TZJ5 1347 aa16.14■□□□□ 0.17
TUBE1-201ENST00000368657 RRBP1Q9P2E9 1410 aaKnown RBP16.13■□□□□ 0.17
TUBE1-201ENST00000368657 PLSCR1O15162 318 aa16.13■□□□□ 0.17
TUBE1-201ENST00000368657 PHF8Q9UPP1 1060 aa16.12■□□□□ 0.17
TUBE1-201ENST00000368657 COL14A1Q05707 1796 aaKnown RBP16.11■□□□□ 0.17
TUBE1-201ENST00000368657 MYOM1P52179 1685 aa16.11■□□□□ 0.17
TUBE1-201ENST00000368657 DLC1Q96QB1 1528 aa16.1■□□□□ 0.17
TUBE1-201ENST00000368657 PDGFDQ9GZP0 370 aaPredicted RBP16.1■□□□□ 0.17
TUBE1-201ENST00000368657 CASZ1Q86V15 1759 aa16.1■□□□□ 0.17
TUBE1-201ENST00000368657 SLC34A2O95436 690 aa16.09■□□□□ 0.17
TUBE1-201ENST00000368657 ABCA3Q99758 1704 aa16.08■□□□□ 0.17
TUBE1-201ENST00000368657 BARGINQ6ZT62 677 aa16.08■□□□□ 0.16
TUBE1-201ENST00000368657 MTFR1LQ9H019 292 aa16.08■□□□□ 0.16
TUBE1-201ENST00000368657 WAPLQ7Z5K2 1190 aa16.07■□□□□ 0.16
TUBE1-201ENST00000368657 ARXQ96QS3 562 aa16.07■□□□□ 0.16
TUBE1-201ENST00000368657 BCL11BQ9C0K0 894 aaPredicted RBP16.07■□□□□ 0.16
TUBE1-201ENST00000368657 ANO8Q9HCE9 1232 aaPredicted RBP16.07■□□□□ 0.16
TUBE1-201ENST00000368657 NUP155O75694 1391 aa16.07■□□□□ 0.16
TUBE1-201ENST00000368657 MAP3K5Q99683 1374 aa16.07■□□□□ 0.16
TUBE1-201ENST00000368657 SGIP1Q9BQI5 828 aa16.06■□□□□ 0.16
TUBE1-201ENST00000368657 PRELPP51888 382 aa16.05■□□□□ 0.16
TUBE1-201ENST00000368657 RPGRIP1LQ68CZ1 1315 aa16.04■□□□□ 0.16
TUBE1-201ENST00000368657 CAPN15O75808 1086 aa16.04■□□□□ 0.16
TUBE1-201ENST00000368657 PRDM11Q9NQV5 511 aa16.04■□□□□ 0.16
TUBE1-201ENST00000368657 PCDH10Q9P2E7 1040 aa16.04■□□□□ 0.16
TUBE1-201ENST00000368657 STK32BQ9NY57 414 aa16.03■□□□□ 0.16
TUBE1-201ENST00000368657 SHANK3Q9BYB0 1731 aa16.02■□□□□ 0.16
TUBE1-201ENST00000368657 FMN2Q9NZ56 1722 aa16.02■□□□□ 0.15
TUBE1-201ENST00000368657 VPS8Q8N3P4 1428 aa16.02■□□□□ 0.15
TUBE1-201ENST00000368657 STRN4Q9NRL3 753 aa16.01■□□□□ 0.15
TUBE1-201ENST00000368657 USP35Q9P2H5 1018 aa16.01■□□□□ 0.15
TUBE1-201ENST00000368657 NRXN1Q9ULB1 1477 aa16.01■□□□□ 0.15
TUBE1-201ENST00000368657 RGPD3A6NKT7 1758 aaPredicted RBP16■□□□□ 0.15
TUBE1-201ENST00000368657 RGPD4Q7Z3J3 1758 aa16■□□□□ 0.15
TUBE1-201ENST00000368657 SLC15A2Q16348 729 aa16■□□□□ 0.15
TUBE1-201ENST00000368657 GPBP1L1Q9HC44 474 aaPredicted RBP16■□□□□ 0.15
TUBE1-201ENST00000368657 STK26Q9P289 416 aa16■□□□□ 0.15
TUBE1-201ENST00000368657 GRIN3BO60391 1043 aa15.99■□□□□ 0.15
TUBE1-201ENST00000368657 EVA1CP58658 441 aa15.99■□□□□ 0.15
TUBE1-201ENST00000368657 PROM2Q8N271 834 aa15.99■□□□□ 0.15
TUBE1-201ENST00000368657 TECPR2O15040 1411 aa15.99■□□□□ 0.15
TUBE1-201ENST00000368657 COL13A1Q5TAT6 717 aaPredicted RBP15.98■□□□□ 0.15
TUBE1-201ENST00000368657 TCP11L2Q8N4U5 519 aa15.98■□□□□ 0.15
TUBE1-201ENST00000368657 THRAP3Q9Y2W1 955 aaKnown RBP15.98■□□□□ 0.15
TUBE1-201ENST00000368657 ABCC11Q96J66 1382 aa15.98■□□□□ 0.15
TUBE1-201ENST00000368657 APLP1P51693 650 aa15.97■□□□□ 0.15
TUBE1-201ENST00000368657 PELP1Q8IZL8 1130 aaKnown RBP15.97■□□□□ 0.15
TUBE1-201ENST00000368657 FAM50AQ14320 339 aaKnown RBP15.96■□□□□ 0.15
TUBE1-201ENST00000368657 TNS4Q8IZW8 715 aa15.96■□□□□ 0.15
TUBE1-201ENST00000368657 DNAJC5GQ8N7S2 189 aa15.96■□□□□ 0.15
TUBE1-201ENST00000368657 SIRT1Q96EB6 747 aa15.96■□□□□ 0.15
TUBE1-201ENST00000368657 KIF1BO60333 1816 aa15.96■□□□□ 0.14
TUBE1-201ENST00000368657 APLP2Q06481 763 aa15.94■□□□□ 0.14
TUBE1-201ENST00000368657 PMFBP1Q8TBY8 1022 aa15.94■□□□□ 0.14
TUBE1-201ENST00000368657 GPRASP1Q5JY77 1395 aa15.94■□□□□ 0.14
TUBE1-201ENST00000368657 PLEKHH1Q9ULM0 1364 aa15.94■□□□□ 0.14
TUBE1-201ENST00000368657 RGPD8O14715 1765 aaPredicted RBP15.94■□□□□ 0.14
TUBE1-201ENST00000368657 ATP10DQ9P241 1426 aa15.94■□□□□ 0.14
TUBE1-201ENST00000368657 CHRNA2Q15822 529 aa15.92■□□□□ 0.14
TUBE1-201ENST00000368657 TXNRD1Q16881 649 aa15.92■□□□□ 0.14
TUBE1-201ENST00000368657 CLTCL1P53675 1640 aa15.92■□□□□ 0.14
TUBE1-201ENST00000368657 OVOS2A0A0G2JMS6 1433 aa15.92■□□□□ 0.14
TUBE1-201ENST00000368657 OVOS2A0A0J9YW53 1432 aa15.92■□□□□ 0.14
TUBE1-201ENST00000368657 OVOS2Q6IE36 1432 aa15.92■□□□□ 0.14
TUBE1-201ENST00000368657 KIAA0232Q92628 1395 aa15.91■□□□□ 0.14
TUBE1-201ENST00000368657 GOLGB1Q14789 3259 aaKnown RBP15.91■□□□□ 0.14
TUBE1-201ENST00000368657 SPINK5Q9NQ38 1064 aaPredicted RBP15.9■□□□□ 0.14
TUBE1-201ENST00000368657 ROCK1Q13464 1354 aa15.89■□□□□ 0.13
TUBE1-201ENST00000368657 DHX57Q6P158 1386 aaKnown RBP15.89■□□□□ 0.13
TUBE1-201ENST00000368657 SSH2Q76I76 1423 aa15.89■□□□□ 0.13
TUBE1-201ENST00000368657 LARP1Q6PKG0 1096 aaKnown RBP15.89■□□□□ 0.13
TUBE1-201ENST00000368657 ALS2Q96Q42 1657 aa15.89■□□□□ 0.13
TUBE1-201ENST00000368657 TRPM3Q9HCF6 1732 aaPredicted RBP15.88■□□□□ 0.13
TUBE1-201ENST00000368657 PAK3O75914 559 aaPredicted RBP15.87■□□□□ 0.13
TUBE1-201ENST00000368657 POLD1P28340 1107 aa15.87■□□□□ 0.13
TUBE1-201ENST00000368657 ZC3H6P61129 1189 aaKnown RBP15.87■□□□□ 0.13
TUBE1-201ENST00000368657 KLHL34Q8N239 644 aa15.87■□□□□ 0.13
TUBE1-201ENST00000368657 TMEM132EQ6IEE7 984 aa15.86■□□□□ 0.13
TUBE1-201ENST00000368657 SLC16A10Q8TF71 515 aa15.86■□□□□ 0.13
TUBE1-201ENST00000368657 SBF2Q86WG5 1849 aa15.86■□□□□ 0.13
TUBE1-201ENST00000368657 ACIN1Q9UKV3 1341 aaKnown RBP15.86■□□□□ 0.13
TUBE1-201ENST00000368657 ANKARQ7Z5J8 1434 aa15.85■□□□□ 0.13
TUBE1-201ENST00000368657 PTF1AQ7RTS3 328 aa15.85■□□□□ 0.13
TUBE1-201ENST00000368657 IFT172Q9UG01 1749 aa15.85■□□□□ 0.13
TUBE1-201ENST00000368657 YBX3P16989 372 aaKnown RBP eCLIP15.84■□□□□ 0.13
TUBE1-201ENST00000368657 DDB1Q16531 1140 aa15.84■□□□□ 0.13
TUBE1-201ENST00000368657 KNDC1Q76NI1 1749 aa15.84■□□□□ 0.13
TUBE1-201ENST00000368657 PEAK1Q9H792 1746 aa15.84■□□□□ 0.13
TUBE1-201ENST00000368657 PARP4Q9UKK3 1724 aaKnown RBP15.84■□□□□ 0.13
TUBE1-201ENST00000368657 CRYBG1Q9Y4K1 1723 aa15.83■□□□□ 0.13
TUBE1-201ENST00000368657 PPLO60437 1756 aa15.83■□□□□ 0.12
TUBE1-201ENST00000368657 JMYQ8N9B5 988 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms