RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 NWD2Q9ULI1 1742 aa14.32□□□□□ -0.12
TPM3-210ENST00000368530 LMOD2Q6P5Q4 547 aa14.32□□□□□ -0.12
TPM3-210ENST00000368530 PLCH1Q4KWH8 1693 aa14.32□□□□□ -0.12
TPM3-210ENST00000368530 KRT27Q7Z3Y8 459 aa14.31□□□□□ -0.12
TPM3-210ENST00000368530 TRPM3Q9HCF6 1732 aaPredicted RBP14.31□□□□□ -0.12
TPM3-210ENST00000368530 WASLO00401 505 aaPredicted RBP14.31□□□□□ -0.12
TPM3-210ENST00000368530 MINK1Q8N4C8 1332 aaPredicted RBP14.3□□□□□ -0.12
TPM3-210ENST00000368530 NEUROD1Q13562 356 aa14.3□□□□□ -0.12
TPM3-210ENST00000368530 SIN3AQ96ST3 1273 aa14.3□□□□□ -0.12
TPM3-210ENST00000368530 BTG4Q9NY30 223 aa14.3□□□□□ -0.12
TPM3-210ENST00000368530 DCAF11Q8TEB1 546 aa14.29□□□□□ -0.12
TPM3-210ENST00000368530 KDM2AQ9Y2K7 1162 aa14.29□□□□□ -0.12
TPM3-210ENST00000368530 CCDC9Q9Y3X0 531 aaKnown RBP14.29□□□□□ -0.12
TPM3-210ENST00000368530 ALS2Q96Q42 1657 aa14.29□□□□□ -0.12
TPM3-210ENST00000368530 NRAPQ86VF7 1730 aa14.28□□□□□ -0.12
TPM3-210ENST00000368530 TULP4Q9NRJ4 1543 aa14.28□□□□□ -0.12
TPM3-210ENST00000368530 GPRASP1Q5JY77 1395 aa14.27□□□□□ -0.12
TPM3-210ENST00000368530 FAM98CQ17RN3 349 aaKnown RBP14.27□□□□□ -0.12
TPM3-210ENST00000368530 STAC3Q96MF2 364 aa14.27□□□□□ -0.12
TPM3-210ENST00000368530 SPATA31A5Q5VU36 1347 aa14.26□□□□□ -0.13
TPM3-210ENST00000368530 SPATA31A7Q8IWB4 1347 aa14.26□□□□□ -0.13
TPM3-210ENST00000368530 SF3B2Q13435 895 aaKnown RBP14.25□□□□□ -0.13
TPM3-210ENST00000368530 EIF3AQ14152 1382 aaKnown RBP14.25□□□□□ -0.13
TPM3-210ENST00000368530 ZBTB22O15209 634 aa14.25□□□□□ -0.13
TPM3-210ENST00000368530 CRYBG1Q9Y4K1 1723 aa14.24□□□□□ -0.13
TPM3-210ENST00000368530 COL14A1Q05707 1796 aaKnown RBP14.24□□□□□ -0.13
TPM3-210ENST00000368530 FAM182BQ5T319 152 aa14.24□□□□□ -0.13
TPM3-210ENST00000368530 NGDNQ8NEJ9 315 aaKnown RBP14.24□□□□□ -0.13
TPM3-210ENST00000368530 NUDT16Q96DE0 195 aaKnown RBP14.24□□□□□ -0.13
TPM3-210ENST00000368530 ATP7BP35670 1465 aa14.23□□□□□ -0.13
TPM3-210ENST00000368530 PAK3O75914 559 aaPredicted RBP14.21□□□□□ -0.13
TPM3-210ENST00000368530 SLC4A2P04920 1241 aa14.21□□□□□ -0.13
TPM3-210ENST00000368530 A0A0G2JS52 829 aa14.2□□□□□ -0.14
TPM3-210ENST00000368530 BAG6P46379 1132 aa14.2□□□□□ -0.14
TPM3-210ENST00000368530 MYT1Q01538 1121 aa14.2□□□□□ -0.14
TPM3-210ENST00000368530 EN1Q05925 392 aaPredicted RBP14.2□□□□□ -0.14
TPM3-210ENST00000368530 CDK19Q9BWU1 502 aa14.2□□□□□ -0.14
TPM3-210ENST00000368530 PRDM11Q9NQV5 511 aa14.2□□□□□ -0.14
TPM3-210ENST00000368530 THSD7AQ9UPZ6 1657 aa14.2□□□□□ -0.14
TPM3-210ENST00000368530 KIAA0232Q92628 1395 aa14.2□□□□□ -0.14
TPM3-210ENST00000368530 SPATA31A1Q5TZJ5 1347 aa14.2□□□□□ -0.14
TPM3-210ENST00000368530 PSDA5PKW4 1024 aaPredicted RBP14.2□□□□□ -0.14
TPM3-210ENST00000368530 CHRNA2Q15822 529 aa14.2□□□□□ -0.14
TPM3-210ENST00000368530 POLR3AO14802 1390 aaPredicted RBP14.2□□□□□ -0.14
TPM3-210ENST00000368530 ARHGEF28Q8N1W1 1705 aaKnown RBP14.19□□□□□ -0.14
TPM3-210ENST00000368530 NBPF8Q3BBV2 869 aa14.19□□□□□ -0.14
TPM3-210ENST00000368530 DISP2A7MBM2 1401 aa14.18□□□□□ -0.14
TPM3-210ENST00000368530 LRP5O75197 1615 aa14.18□□□□□ -0.14
TPM3-210ENST00000368530 PLEKHG3A1L390 1219 aa14.18□□□□□ -0.14
TPM3-210ENST00000368530 ACEP12821 1306 aa14.18□□□□□ -0.14
TPM3-210ENST00000368530 ZNF316A6NFI3 1004 aaPredicted RBP14.17□□□□□ -0.14
TPM3-210ENST00000368530 ZC3H6P61129 1189 aaKnown RBP14.17□□□□□ -0.14
TPM3-210ENST00000368530 CCDC61Q9Y6R9 512 aa14.17□□□□□ -0.14
TPM3-210ENST00000368530 NBPF1Q3BBV0 1214 aa14.16□□□□□ -0.14
TPM3-210ENST00000368530 NUTM2GQ5VZR2 741 aa14.16□□□□□ -0.14
TPM3-210ENST00000368530 TONSLQ96HA7 1378 aa14.16□□□□□ -0.14
TPM3-210ENST00000368530 CAMKK2Q96RR4 588 aa14.15□□□□□ -0.14
TPM3-210ENST00000368530 PHRF1Q9P1Y6 1649 aaKnown RBP14.15□□□□□ -0.14
TPM3-210ENST00000368530 EZH2Q15910 746 aaKnown RBP14.15□□□□□ -0.14
TPM3-210ENST00000368530 STRN4Q9NRL3 753 aa14.15□□□□□ -0.14
TPM3-210ENST00000368530 TOPAZ1Q8N9V7 1692 aa14.14□□□□□ -0.15
TPM3-210ENST00000368530 BARGINQ6ZT62 677 aa14.14□□□□□ -0.15
TPM3-210ENST00000368530 FOXD4L1Q9NU39 408 aa14.14□□□□□ -0.15
TPM3-210ENST00000368530 USP19O94966 1318 aa14.14□□□□□ -0.15
TPM3-210ENST00000368530 CAMTA1Q9Y6Y1 1673 aa14.13□□□□□ -0.15
TPM3-210ENST00000368530 RGPD1P0DJD0 1748 aa14.13□□□□□ -0.15
TPM3-210ENST00000368530 ITSN1Q15811 1721 aa14.13□□□□□ -0.15
TPM3-210ENST00000368530 TNS1Q9HBL0 1735 aaKnown RBP14.13□□□□□ -0.15
TPM3-210ENST00000368530 R3HDM1Q15032 1099 aaKnown RBP14.13□□□□□ -0.15
TPM3-210ENST00000368530 FAM196AQ6ZSG2 479 aa14.13□□□□□ -0.15
TPM3-210ENST00000368530 CPDO75976 1380 aa14.13□□□□□ -0.15
TPM3-210ENST00000368530 SSH2Q76I76 1423 aa14.12□□□□□ -0.15
TPM3-210ENST00000368530 TRIM37O94972 964 aa14.12□□□□□ -0.15
TPM3-210ENST00000368530 LARP1Q6PKG0 1096 aaKnown RBP14.12□□□□□ -0.15
TPM3-210ENST00000368530 ABTB2Q8N961 1025 aa14.11□□□□□ -0.15
TPM3-210ENST00000368530 TIMELESSQ9UNS1 1208 aa14.11□□□□□ -0.15
TPM3-210ENST00000368530 NRKQ7Z2Y5 1582 aa14.1□□□□□ -0.15
TPM3-210ENST00000368530 GCP02774 474 aa14.1□□□□□ -0.15
TPM3-210ENST00000368530 USP35Q9P2H5 1018 aa14.1□□□□□ -0.15
TPM3-210ENST00000368530 LMO7Q8WWI1 1683 aa14.1□□□□□ -0.15
TPM3-210ENST00000368530 KIAA1210Q9ULL0 1709 aa14.1□□□□□ -0.15
TPM3-210ENST00000368530 EVA1CP58658 441 aa14.1□□□□□ -0.15
TPM3-210ENST00000368530 APBA3O96018 575 aa14.09□□□□□ -0.15
TPM3-210ENST00000368530 TCP11L2Q8N4U5 519 aa14.09□□□□□ -0.15
TPM3-210ENST00000368530 NLRP13Q86W25 1043 aa14.08□□□□□ -0.16
TPM3-210ENST00000368530 CABP2Q9NPB3 220 aa14.08□□□□□ -0.16
TPM3-210ENST00000368530 PPIP5K1Q6PFW1 1433 aa14.07□□□□□ -0.16
TPM3-210ENST00000368530 PARD3Q8TEW0 1356 aa14.07□□□□□ -0.16
TPM3-210ENST00000368530 CENPJQ9HC77 1338 aaPredicted RBP14.07□□□□□ -0.16
TPM3-210ENST00000368530 THRAP3Q9Y2W1 955 aaKnown RBP14.07□□□□□ -0.16
TPM3-210ENST00000368530 SRPK2P78362 688 aaKnown RBP14.06□□□□□ -0.16
TPM3-210ENST00000368530 PDE3BQ13370 1112 aa14.06□□□□□ -0.16
TPM3-210ENST00000368530 DIEXFQ68CQ4 756 aaKnown RBP14.06□□□□□ -0.16
TPM3-210ENST00000368530 COL5A2P05997 1499 aaPredicted RBP14.06□□□□□ -0.16
TPM3-210ENST00000368530 BRD4O60885 1362 aaPredicted RBP14.06□□□□□ -0.16
TPM3-210ENST00000368530 CABP1Q9NZU7 370 aa14.05□□□□□ -0.16
TPM3-210ENST00000368530 USP6P35125 1406 aa14.04□□□□□ -0.16
TPM3-210ENST00000368530 AATKQ6ZMQ8 1374 aa14.03□□□□□ -0.16
TPM3-210ENST00000368530 L3MBTL2Q969R5 705 aa14.03□□□□□ -0.16
TPM3-210ENST00000368530 RREB1Q92766 1687 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms