RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 MEX3CQ5U5Q3 659 aaKnown RBP5.47□□□□□ -1.53
ECHDC1-205ENST00000368295 ZNF784Q8NCA9 323 aaPredicted RBP5.47□□□□□ -1.53
ECHDC1-205ENST00000368295 BCL2L12Q9HB09 334 aa5.47□□□□□ -1.53
ECHDC1-205ENST00000368295 GNPATO15228 680 aa5.46□□□□□ -1.54
ECHDC1-205ENST00000368295 PTGDRQ13258 359 aa5.46□□□□□ -1.54
ECHDC1-205ENST00000368295 TSR1Q2NL82 804 aaKnown RBP5.46□□□□□ -1.54
ECHDC1-205ENST00000368295 C6orf132Q5T0Z8 1188 aa5.46□□□□□ -1.54
ECHDC1-205ENST00000368295 ZNF772Q68DY9 489 aaPredicted RBP5.46□□□□□ -1.54
ECHDC1-205ENST00000368295 FHOD3Q2V2M9 1422 aa5.46□□□□□ -1.54
ECHDC1-205ENST00000368295 VWDEQ8N2E2 1590 aa5.46□□□□□ -1.54
ECHDC1-205ENST00000368295 PTPREP23469 700 aa5.46□□□□□ -1.54
ECHDC1-205ENST00000368295 ZBED2Q9BTP6 218 aa5.46□□□□□ -1.54
ECHDC1-205ENST00000368295 CCDC9Q9Y3X0 531 aaKnown RBP5.46□□□□□ -1.54
ECHDC1-205ENST00000368295 RAPGEF2Q9Y4G8 1499 aa5.45□□□□□ -1.54
ECHDC1-205ENST00000368295 KRI1Q8N9T8 703 aaKnown RBP5.45□□□□□ -1.54
ECHDC1-205ENST00000368295 EFCAB5A4FU69 1503 aa5.45□□□□□ -1.54
ECHDC1-205ENST00000368295 HECW1Q76N89 1606 aa5.45□□□□□ -1.54
ECHDC1-205ENST00000368295 PPP1R3GB7ZBB8 358 aa5.44□□□□□ -1.54
ECHDC1-205ENST00000368295 WIPF1O43516 503 aa5.44□□□□□ -1.54
ECHDC1-205ENST00000368295 MAP2K5Q13163 448 aa5.44□□□□□ -1.54
ECHDC1-205ENST00000368295 SLC24A3Q9HC58 644 aa5.44□□□□□ -1.54
ECHDC1-205ENST00000368295 RBM27Q9P2N5 1060 aaKnown RBP5.44□□□□□ -1.54
ECHDC1-205ENST00000368295 CDK11AQ9UQ88 783 aaPredicted RBP5.44□□□□□ -1.54
ECHDC1-205ENST00000368295 ABCA9Q8IUA7 1624 aa5.44□□□□□ -1.54
ECHDC1-205ENST00000368295 RNF17Q9BXT8 1623 aaKnown RBP5.43□□□□□ -1.54
ECHDC1-205ENST00000368295 ZMYM4Q5VZL5 1548 aa5.43□□□□□ -1.54
ECHDC1-205ENST00000368295 PLA2R1Q13018 1463 aa5.43□□□□□ -1.54
ECHDC1-205ENST00000368295 C9orf84Q5VXU9 1444 aa5.43□□□□□ -1.54
ECHDC1-205ENST00000368295 MINK1Q8N4C8 1332 aaPredicted RBP5.43□□□□□ -1.54
ECHDC1-205ENST00000368295 DEFB132Q7Z7B7 95 aa5.43□□□□□ -1.54
ECHDC1-205ENST00000368295 AK7Q96M32 723 aa5.43□□□□□ -1.54
ECHDC1-205ENST00000368295 NPDC1Q9NQX5 325 aaPredicted RBP5.43□□□□□ -1.54
ECHDC1-205ENST00000368295 NEURL4Q96JN8 1562 aa5.42□□□□□ -1.54
ECHDC1-205ENST00000368295 ATP10AO60312 1499 aa5.42□□□□□ -1.54
ECHDC1-205ENST00000368295 CDK12Q9NYV4 1490 aaPredicted RBP5.42□□□□□ -1.54
ECHDC1-205ENST00000368295 SOWAHBA6NEL2 793 aa5.42□□□□□ -1.54
ECHDC1-205ENST00000368295 STRCP1A6NGW2 1772 aa5.42□□□□□ -1.54
ECHDC1-205ENST00000368295 EP400Q96L91 3159 aa5.42□□□□□ -1.54
ECHDC1-205ENST00000368295 ATAD2Q6PL18 1390 aa5.41□□□□□ -1.54
ECHDC1-205ENST00000368295 LOC105371045A0A1W2PR82 267 aa5.41□□□□□ -1.54
ECHDC1-205ENST00000368295 DGAT1O75907 488 aa5.41□□□□□ -1.54
ECHDC1-205ENST00000368295 WFS1O76024 890 aa5.41□□□□□ -1.54
ECHDC1-205ENST00000368295 PRSS12P56730 875 aa5.41□□□□□ -1.54
ECHDC1-205ENST00000368295 PADI6Q6TGC4 694 aa5.41□□□□□ -1.54
ECHDC1-205ENST00000368295 KRTAP9-9Q9BYP9 154 aa5.41□□□□□ -1.54
ECHDC1-205ENST00000368295 KRTAP9-4Q9BYQ2 154 aa5.41□□□□□ -1.54
ECHDC1-205ENST00000368295 AFF2P51816 1311 aa5.4□□□□□ -1.54
ECHDC1-205ENST00000368295 FAM181BA6NEQ2 426 aa5.4□□□□□ -1.54
ECHDC1-205ENST00000368295 COL9A1P20849 921 aa5.4□□□□□ -1.54
ECHDC1-205ENST00000368295 CCDC102AQ96A19 550 aa5.4□□□□□ -1.54
ECHDC1-205ENST00000368295 KRTAP4-7Q9BYR0 210 aa5.4□□□□□ -1.54
ECHDC1-205ENST00000368295 ESF1Q9H501 851 aaKnown RBP5.4□□□□□ -1.54
ECHDC1-205ENST00000368295 IRF6O14896 467 aa5.4□□□□□ -1.55
ECHDC1-205ENST00000368295 CDK11BP21127 795 aaKnown RBP5.4□□□□□ -1.55
ECHDC1-205ENST00000368295 LAPTM4BQ86VI4 370 aa5.4□□□□□ -1.55
ECHDC1-205ENST00000368295 TTC13Q8NBP0 860 aa5.4□□□□□ -1.55
ECHDC1-205ENST00000368295 CDCA7LQ96GN5 454 aa5.4□□□□□ -1.55
ECHDC1-205ENST00000368295 UTRNP46939 3433 aa5.4□□□□□ -1.55
ECHDC1-205ENST00000368295 FAM135BQ49AJ0 1406 aa5.39□□□□□ -1.55
ECHDC1-205ENST00000368295 JCADQ9P266 1359 aa5.39□□□□□ -1.55
ECHDC1-205ENST00000368295 IQGAP2Q13576 1575 aa5.39□□□□□ -1.55
ECHDC1-205ENST00000368295 CEP170BQ9Y4F5 1589 aaPredicted RBP5.39□□□□□ -1.55
ECHDC1-205ENST00000368295 ONECUT3O60422 494 aaPredicted RBP5.39□□□□□ -1.55
ECHDC1-205ENST00000368295 FECHP22830 423 aa5.39□□□□□ -1.55
ECHDC1-205ENST00000368295 BCAMP50895 628 aa5.39□□□□□ -1.55
ECHDC1-205ENST00000368295 MYO3AQ8NEV4 1616 aa5.39□□□□□ -1.55
ECHDC1-205ENST00000368295 SUPT6HQ7KZ85 1726 aaKnown RBP5.39□□□□□ -1.55
ECHDC1-205ENST00000368295 PKDCCQ504Y2 493 aa5.38□□□□□ -1.55
ECHDC1-205ENST00000368295 ABCA8O94911 1581 aa5.38□□□□□ -1.55
ECHDC1-205ENST00000368295 ROBO1Q9Y6N7 1651 aa5.38□□□□□ -1.55
ECHDC1-205ENST00000368295 ZBTB7CA1YPR0 619 aa5.38□□□□□ -1.55
ECHDC1-205ENST00000368295 TRIM6-TRIM34B2RNG4 842 aa5.38□□□□□ -1.55
ECHDC1-205ENST00000368295 NBPF26B4DH59 902 aa5.38□□□□□ -1.55
ECHDC1-205ENST00000368295 TRIM66O15016 1216 aa5.38□□□□□ -1.55
ECHDC1-205ENST00000368295 QTRT2Q9H974 415 aaKnown RBP5.38□□□□□ -1.55
ECHDC1-205ENST00000368295 MAGI2Q86UL8 1455 aa5.37□□□□□ -1.55
ECHDC1-205ENST00000368295 POTECB2RU33 542 aa5.37□□□□□ -1.55
ECHDC1-205ENST00000368295 OATP04181 439 aa5.37□□□□□ -1.55
ECHDC1-205ENST00000368295 HSP90B1P14625 803 aaKnown RBP5.37□□□□□ -1.55
ECHDC1-205ENST00000368295 PACS2Q86VP3 889 aa5.37□□□□□ -1.55
ECHDC1-205ENST00000368295 WBP1LQ9NX94 342 aa5.37□□□□□ -1.55
ECHDC1-205ENST00000368295 RABGEF1Q9UJ41 708 aa5.37□□□□□ -1.55
ECHDC1-205ENST00000368295 ADGRG1Q9Y653 693 aa5.37□□□□□ -1.55
ECHDC1-205ENST00000368295 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.37□□□□□ -1.55
ECHDC1-205ENST00000368295 IGF1RP08069 1367 aa5.37□□□□□ -1.55
ECHDC1-205ENST00000368295 NHSL1Q5SYE7 1610 aa5.37□□□□□ -1.55
ECHDC1-205ENST00000368295 ATP10BO94823 1461 aa5.37□□□□□ -1.55
ECHDC1-205ENST00000368295 COL13A1Q5TAT6 717 aaPredicted RBP5.36□□□□□ -1.55
ECHDC1-205ENST00000368295 RBM46Q8TBY0 533 aaKnown RBP5.36□□□□□ -1.55
ECHDC1-205ENST00000368295 BCL9LQ86UU0 1499 aa5.36□□□□□ -1.55
ECHDC1-205ENST00000368295 ZNF142P52746 1687 aaPredicted RBP5.36□□□□□ -1.55
ECHDC1-205ENST00000368295 NPATQ14207 1427 aa5.36□□□□□ -1.55
ECHDC1-205ENST00000368295 RBM6P78332 1123 aaKnown RBP5.36□□□□□ -1.55
ECHDC1-205ENST00000368295 NEUROD2Q15784 382 aa5.36□□□□□ -1.55
ECHDC1-205ENST00000368295 TSKSQ9UJT2 592 aa5.36□□□□□ -1.55
ECHDC1-205ENST00000368295 ZMYM3Q14202 1370 aa5.36□□□□□ -1.55
ECHDC1-205ENST00000368295 SCAPERQ9BY12 1400 aa5.35□□□□□ -1.55
ECHDC1-205ENST00000368295 PDE4DQ08499 809 aa5.35□□□□□ -1.55
ECHDC1-205ENST00000368295 AMHR2Q16671 573 aa5.35□□□□□ -1.55
ECHDC1-205ENST00000368295 PROX2Q3B8N5 592 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms