RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 NWD2Q9ULI1 1742 aa15.58■□□□□ 0.08
USF1-201ENST00000368019 CCDC125Q86Z20 511 aa15.58■□□□□ 0.08
USF1-201ENST00000368019 L3MBTL2Q969R5 705 aa15.58■□□□□ 0.08
USF1-201ENST00000368019 PSME1Q06323 249 aa15.57■□□□□ 0.08
USF1-201ENST00000368019 ANKARQ7Z5J8 1434 aa15.57■□□□□ 0.08
USF1-201ENST00000368019 PLCH1Q4KWH8 1693 aa15.57■□□□□ 0.08
USF1-201ENST00000368019 BCL11AQ9H165 835 aa15.56■□□□□ 0.08
USF1-201ENST00000368019 TRPM3Q9HCF6 1732 aaPredicted RBP15.56■□□□□ 0.08
USF1-201ENST00000368019 ROCK2O75116 1388 aaKnown RBP15.55■□□□□ 0.08
USF1-201ENST00000368019 MSH5O43196 834 aa15.55■□□□□ 0.08
USF1-201ENST00000368019 SAFB2Q14151 953 aaKnown RBP eCLIP15.55■□□□□ 0.08
USF1-201ENST00000368019 CABLES1Q8TDN4 633 aa15.55■□□□□ 0.08
USF1-201ENST00000368019 ALS2Q96Q42 1657 aa15.54■□□□□ 0.08
USF1-201ENST00000368019 ARHGEF10O15013 1369 aa15.53■□□□□ 0.08
USF1-201ENST00000368019 RNF123Q5XPI4 1314 aa15.53■□□□□ 0.08
USF1-201ENST00000368019 ONECUT3O60422 494 aaPredicted RBP15.53■□□□□ 0.08
USF1-201ENST00000368019 VPS72Q15906 364 aa15.53■□□□□ 0.08
USF1-201ENST00000368019 POGKQ9P215 609 aa15.53■□□□□ 0.08
USF1-201ENST00000368019 KTN1Q86UP2 1357 aaKnown RBP15.52■□□□□ 0.08
USF1-201ENST00000368019 KIF7Q2M1P5 1343 aa15.52■□□□□ 0.08
USF1-201ENST00000368019 PMFBP1Q8TBY8 1022 aa15.52■□□□□ 0.08
USF1-201ENST00000368019 NRAPQ86VF7 1730 aa15.51■□□□□ 0.07
USF1-201ENST00000368019 PRR36Q9H6K5 1346 aa15.51■□□□□ 0.07
USF1-201ENST00000368019 FAM83GA6ND36 823 aa15.51■□□□□ 0.07
USF1-201ENST00000368019 MRS2Q9HD23 443 aa15.51■□□□□ 0.07
USF1-201ENST00000368019 TRAK1Q9UPV9 953 aa15.51■□□□□ 0.07
USF1-201ENST00000368019 ERICH6Q7L0X2 663 aa15.5■□□□□ 0.07
USF1-201ENST00000368019 STAC3Q96MF2 364 aa15.5■□□□□ 0.07
USF1-201ENST00000368019 ZRANB1Q9UGI0 708 aa15.5■□□□□ 0.07
USF1-201ENST00000368019 CRYBG1Q9Y4K1 1723 aa15.5■□□□□ 0.07
USF1-201ENST00000368019 BLMP54132 1417 aaPredicted RBP15.5■□□□□ 0.07
USF1-201ENST00000368019 TULP4Q9NRJ4 1543 aa15.49■□□□□ 0.07
USF1-201ENST00000368019 HAP1P54257 671 aaPredicted RBP15.49■□□□□ 0.07
USF1-201ENST00000368019 SEPT12Q8IYM1 358 aa15.49■□□□□ 0.07
USF1-201ENST00000368019 DCAF11Q8TEB1 546 aa15.49■□□□□ 0.07
USF1-201ENST00000368019 ARHGEF28Q8N1W1 1705 aaKnown RBP15.48■□□□□ 0.07
USF1-201ENST00000368019 MINK1Q8N4C8 1332 aaPredicted RBP15.48■□□□□ 0.07
USF1-201ENST00000368019 NBPF8Q3BBV2 869 aa15.48■□□□□ 0.07
USF1-201ENST00000368019 LMOD2Q6P5Q4 547 aa15.48■□□□□ 0.07
USF1-201ENST00000368019 KDM2AQ9Y2K7 1162 aa15.48■□□□□ 0.07
USF1-201ENST00000368019 EIF3AQ14152 1382 aaKnown RBP15.48■□□□□ 0.07
USF1-201ENST00000368019 C11orf95C9JLR9 678 aaPredicted RBP15.47■□□□□ 0.07
USF1-201ENST00000368019 WASLO00401 505 aaPredicted RBP15.47■□□□□ 0.07
USF1-201ENST00000368019 COL14A1Q05707 1796 aaKnown RBP15.47■□□□□ 0.07
USF1-201ENST00000368019 PLEKHG5O94827 1062 aa15.46■□□□□ 0.07
USF1-201ENST00000368019 ITSN1Q15811 1721 aa15.46■□□□□ 0.06
USF1-201ENST00000368019 CCDC184Q52MB2 194 aa15.45■□□□□ 0.06
USF1-201ENST00000368019 NUDCQ9Y266 331 aa15.45■□□□□ 0.06
USF1-201ENST00000368019 GPRASP1Q5JY77 1395 aa15.45■□□□□ 0.06
USF1-201ENST00000368019 KRT27Q7Z3Y8 459 aa15.44■□□□□ 0.06
USF1-201ENST00000368019 DEFB132Q7Z7B7 95 aa15.44■□□□□ 0.06
USF1-201ENST00000368019 BTG4Q9NY30 223 aa15.43■□□□□ 0.06
USF1-201ENST00000368019 CCDC9Q9Y3X0 531 aaKnown RBP15.43■□□□□ 0.06
USF1-201ENST00000368019 INSRP06213 1382 aa15.43■□□□□ 0.06
USF1-201ENST00000368019 ATP7BP35670 1465 aa15.43■□□□□ 0.06
USF1-201ENST00000368019 USP47Q96K76 1375 aa15.42■□□□□ 0.06
USF1-201ENST00000368019 KIAA1210Q9ULL0 1709 aa15.42■□□□□ 0.06
USF1-201ENST00000368019 NGDNQ8NEJ9 315 aaKnown RBP15.41■□□□□ 0.06
USF1-201ENST00000368019 FAM98CQ17RN3 349 aaKnown RBP15.4■□□□□ 0.06
USF1-201ENST00000368019 FAM9BQ8IZU0 186 aa15.4■□□□□ 0.06
USF1-201ENST00000368019 NUDT16Q96DE0 195 aaKnown RBP15.4■□□□□ 0.06
USF1-201ENST00000368019 TOPAZ1Q8N9V7 1692 aa15.4■□□□□ 0.06
USF1-201ENST00000368019 THSD7AQ9UPZ6 1657 aa15.4■□□□□ 0.06
USF1-201ENST00000368019 SPATA31A5Q5VU36 1347 aa15.4■□□□□ 0.06
USF1-201ENST00000368019 SPATA31A7Q8IWB4 1347 aa15.4■□□□□ 0.06
USF1-201ENST00000368019 SF3B2Q13435 895 aaKnown RBP15.39■□□□□ 0.05
USF1-201ENST00000368019 PHRF1Q9P1Y6 1649 aaKnown RBP15.39■□□□□ 0.05
USF1-201ENST00000368019 BRD4O60885 1362 aaPredicted RBP15.38■□□□□ 0.05
USF1-201ENST00000368019 IRX6P78412 446 aaPredicted RBP15.38■□□□□ 0.05
USF1-201ENST00000368019 POLR3AO14802 1390 aaPredicted RBP15.37■□□□□ 0.05
USF1-201ENST00000368019 PAK3O75914 559 aaPredicted RBP15.37■□□□□ 0.05
USF1-201ENST00000368019 CDK19Q9BWU1 502 aa15.37■□□□□ 0.05
USF1-201ENST00000368019 RGPD1P0DJD0 1748 aa15.37■□□□□ 0.05
USF1-201ENST00000368019 PLEKHG3A1L390 1219 aa15.35■□□□□ 0.05
USF1-201ENST00000368019 PRDM11Q9NQV5 511 aa15.35■□□□□ 0.05
USF1-201ENST00000368019 LRP5O75197 1615 aa15.35■□□□□ 0.05
USF1-201ENST00000368019 KIAA0232Q92628 1395 aa15.35■□□□□ 0.05
USF1-201ENST00000368019 TNS1Q9HBL0 1735 aaKnown RBP15.34■□□□□ 0.05
USF1-201ENST00000368019 A0A0G2JS52 829 aa15.34■□□□□ 0.05
USF1-201ENST00000368019 B4GALNT3Q6L9W6 998 aa15.34■□□□□ 0.05
USF1-201ENST00000368019 NOP58Q9Y2X3 529 aaKnown RBP15.34■□□□□ 0.05
USF1-201ENST00000368019 CCDC61Q9Y6R9 512 aa15.34■□□□□ 0.05
USF1-201ENST00000368019 ACEP12821 1306 aa15.34■□□□□ 0.05
USF1-201ENST00000368019 SPATA31A1Q5TZJ5 1347 aa15.34■□□□□ 0.05
USF1-201ENST00000368019 BAG6P46379 1132 aa15.33■□□□□ 0.04
USF1-201ENST00000368019 RALBP1Q15311 655 aa15.33■□□□□ 0.04
USF1-201ENST00000368019 NBPF1Q3BBV0 1214 aa15.33■□□□□ 0.04
USF1-201ENST00000368019 TRPM1Q7Z4N2 1603 aa15.32■□□□□ 0.04
USF1-201ENST00000368019 CHRNA2Q15822 529 aa15.32■□□□□ 0.04
USF1-201ENST00000368019 FAM182BQ5T319 152 aa15.32■□□□□ 0.04
USF1-201ENST00000368019 PNISRQ8TF01 805 aaKnown RBP15.32■□□□□ 0.04
USF1-201ENST00000368019 DISP2A7MBM2 1401 aa15.32■□□□□ 0.04
USF1-201ENST00000368019 NRKQ7Z2Y5 1582 aa15.31■□□□□ 0.04
USF1-201ENST00000368019 LMO7Q8WWI1 1683 aa15.31■□□□□ 0.04
USF1-201ENST00000368019 ZC3H6P61129 1189 aaKnown RBP15.3■□□□□ 0.04
USF1-201ENST00000368019 EN1Q05925 392 aaPredicted RBP15.3■□□□□ 0.04
USF1-201ENST00000368019 PDE3BQ13370 1112 aa15.3■□□□□ 0.04
USF1-201ENST00000368019 NUTM2GQ5VZR2 741 aa15.3■□□□□ 0.04
USF1-201ENST00000368019 CAMTA1Q9Y6Y1 1673 aa15.3■□□□□ 0.04
USF1-201ENST00000368019 CPDO75976 1380 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms