RNA–Protein interactions for RNA: ENST00000366888.6

PACRG-202, Transcript of parkin coregulated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PACRG, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRG-202ENST00000366888 ARHGEF28Q8N1W1 1705 aaKnown RBP11.86□□□□□ -0.51
PACRG-202ENST00000366888 BTG4Q9NY30 223 aa11.86□□□□□ -0.51
PACRG-202ENST00000366888 TRAK1Q9UPV9 953 aa11.86□□□□□ -0.51
PACRG-202ENST00000366888 PHRF1Q9P1Y6 1649 aaKnown RBP11.86□□□□□ -0.51
PACRG-202ENST00000366888 PRR36Q9H6K5 1346 aa11.86□□□□□ -0.51
PACRG-202ENST00000366888 THSD7AQ9UPZ6 1657 aa11.86□□□□□ -0.51
PACRG-202ENST00000366888 TULP4Q9NRJ4 1543 aa11.85□□□□□ -0.51
PACRG-202ENST00000366888 BAG6P46379 1132 aa11.83□□□□□ -0.52
PACRG-202ENST00000366888 ACIN1Q9UKV3 1341 aaKnown RBP11.83□□□□□ -0.52
PACRG-202ENST00000366888 GPRASP1Q5JY77 1395 aa11.83□□□□□ -0.52
PACRG-202ENST00000366888 EN1Q05925 392 aaPredicted RBP11.82□□□□□ -0.52
PACRG-202ENST00000366888 KDM2AQ9Y2K7 1162 aa11.82□□□□□ -0.52
PACRG-202ENST00000366888 RAB3GAP2Q9H2M9 1393 aa11.81□□□□□ -0.52
PACRG-202ENST00000366888 PAK3O75914 559 aaPredicted RBP11.81□□□□□ -0.52
PACRG-202ENST00000366888 SPATA31A5Q5VU36 1347 aa11.8□□□□□ -0.52
PACRG-202ENST00000366888 SPATA31A7Q8IWB4 1347 aa11.8□□□□□ -0.52
PACRG-202ENST00000366888 HRCP23327 699 aa11.8□□□□□ -0.52
PACRG-202ENST00000366888 NGDNQ8NEJ9 315 aaKnown RBP11.8□□□□□ -0.52
PACRG-202ENST00000366888 TOPAZ1Q8N9V7 1692 aa11.8□□□□□ -0.52
PACRG-202ENST00000366888 ATP7BP35670 1465 aa11.8□□□□□ -0.52
PACRG-202ENST00000366888 EIF3AQ14152 1382 aaKnown RBP11.8□□□□□ -0.52
PACRG-202ENST00000366888 WASLO00401 505 aaPredicted RBP11.79□□□□□ -0.52
PACRG-202ENST00000366888 CHRNA2Q15822 529 aa11.79□□□□□ -0.52
PACRG-202ENST00000366888 DCAF11Q8TEB1 546 aa11.79□□□□□ -0.52
PACRG-202ENST00000366888 PRDM11Q9NQV5 511 aa11.79□□□□□ -0.52
PACRG-202ENST00000366888 KIAA0232Q92628 1395 aa11.79□□□□□ -0.52
PACRG-202ENST00000366888 R3HDM1Q15032 1099 aaKnown RBP11.79□□□□□ -0.52
PACRG-202ENST00000366888 RREB1Q92766 1687 aa11.78□□□□□ -0.52
PACRG-202ENST00000366888 NUTM2GQ5VZR2 741 aa11.78□□□□□ -0.52
PACRG-202ENST00000366888 STRN4Q9NRL3 753 aa11.78□□□□□ -0.52
PACRG-202ENST00000366888 NUP188Q5SRE5 1749 aa11.77□□□□□ -0.52
PACRG-202ENST00000366888 NRKQ7Z2Y5 1582 aa11.77□□□□□ -0.53
PACRG-202ENST00000366888 ZC3H6P61129 1189 aaKnown RBP11.77□□□□□ -0.53
PACRG-202ENST00000366888 EZH2Q15910 746 aaKnown RBP11.77□□□□□ -0.53
PACRG-202ENST00000366888 SPATA31A1Q5TZJ5 1347 aa11.76□□□□□ -0.53
PACRG-202ENST00000366888 TRIM37O94972 964 aa11.76□□□□□ -0.53
PACRG-202ENST00000366888 USP35Q9P2H5 1018 aa11.76□□□□□ -0.53
PACRG-202ENST00000366888 DISP2A7MBM2 1401 aa11.76□□□□□ -0.53
PACRG-202ENST00000366888 LMO7Q8WWI1 1683 aa11.75□□□□□ -0.53
PACRG-202ENST00000366888 NUDT16Q96DE0 195 aaKnown RBP11.75□□□□□ -0.53
PACRG-202ENST00000366888 CAMTA1Q9Y6Y1 1673 aa11.74□□□□□ -0.53
PACRG-202ENST00000366888 KIAA1210Q9ULL0 1709 aa11.73□□□□□ -0.53
PACRG-202ENST00000366888 SSH2Q76I76 1423 aa11.72□□□□□ -0.53
PACRG-202ENST00000366888 CAMKK2Q96RR4 588 aa11.72□□□□□ -0.53
PACRG-202ENST00000366888 CDK19Q9BWU1 502 aa11.72□□□□□ -0.53
PACRG-202ENST00000366888 PARP4Q9UKK3 1724 aaKnown RBP11.72□□□□□ -0.53
PACRG-202ENST00000366888 SBF2Q86WG5 1849 aa11.72□□□□□ -0.53
PACRG-202ENST00000366888 ACEP12821 1306 aa11.72□□□□□ -0.53
PACRG-202ENST00000366888 APBA3O96018 575 aa11.71□□□□□ -0.53
PACRG-202ENST00000366888 FAM196AQ6ZSG2 479 aa11.71□□□□□ -0.53
PACRG-202ENST00000366888 PIAS4Q8N2W9 510 aaPredicted RBP11.71□□□□□ -0.53
PACRG-202ENST00000366888 QRICH2Q9H0J4 1663 aa11.71□□□□□ -0.53
PACRG-202ENST00000366888 WNK3Q9BYP7 1800 aa11.71□□□□□ -0.54
PACRG-202ENST00000366888 RGPD5Q99666 1765 aa11.7□□□□□ -0.54
PACRG-202ENST00000366888 POLR3AO14802 1390 aaPredicted RBP11.7□□□□□ -0.54
PACRG-202ENST00000366888 EVA1CP58658 441 aa11.7□□□□□ -0.54
PACRG-202ENST00000366888 LARP1Q6PKG0 1096 aaKnown RBP11.7□□□□□ -0.54
PACRG-202ENST00000366888 PDE3BQ13370 1112 aa11.69□□□□□ -0.54
PACRG-202ENST00000366888 NBPF8Q3BBV2 869 aa11.69□□□□□ -0.54
PACRG-202ENST00000366888 LRRC37A3O60309 1634 aa11.68□□□□□ -0.54
PACRG-202ENST00000366888 ABTB2Q8N961 1025 aa11.68□□□□□ -0.54
PACRG-202ENST00000366888 PEAK1Q9H792 1746 aa11.68□□□□□ -0.54
PACRG-202ENST00000366888 AKAP12Q02952 1782 aa11.68□□□□□ -0.54
PACRG-202ENST00000366888 BARGINQ6ZT62 677 aa11.67□□□□□ -0.54
PACRG-202ENST00000366888 CCDC61Q9Y6R9 512 aa11.67□□□□□ -0.54
PACRG-202ENST00000366888 COL5A2P05997 1499 aaPredicted RBP11.67□□□□□ -0.54
PACRG-202ENST00000366888 PARD3Q8TEW0 1356 aa11.67□□□□□ -0.54
PACRG-202ENST00000366888 ZBTB7CA1YPR0 619 aa11.67□□□□□ -0.54
PACRG-202ENST00000366888 PPIP5K1Q6PFW1 1433 aa11.67□□□□□ -0.54
PACRG-202ENST00000366888 TCP11L2Q8N4U5 519 aa11.67□□□□□ -0.54
PACRG-202ENST00000366888 USP19O94966 1318 aa11.66□□□□□ -0.54
PACRG-202ENST00000366888 PIK3C2AO00443 1686 aa11.66□□□□□ -0.54
PACRG-202ENST00000366888 CPDO75976 1380 aa11.66□□□□□ -0.54
PACRG-202ENST00000366888 RGPD3A6NKT7 1758 aaPredicted RBP11.66□□□□□ -0.54
PACRG-202ENST00000366888 COL18A1P39060 1754 aa11.66□□□□□ -0.54
PACRG-202ENST00000366888 RGPD4Q7Z3J3 1758 aa11.66□□□□□ -0.54
PACRG-202ENST00000366888 PLEKHG3A1L390 1219 aa11.66□□□□□ -0.54
PACRG-202ENST00000366888 NBPF1Q3BBV0 1214 aa11.66□□□□□ -0.54
PACRG-202ENST00000366888 STAC3Q96MF2 364 aa11.66□□□□□ -0.54
PACRG-202ENST00000366888 SRPK2P78362 688 aaKnown RBP11.65□□□□□ -0.55
PACRG-202ENST00000366888 CABP2Q9NPB3 220 aa11.65□□□□□ -0.55
PACRG-202ENST00000366888 GCP02774 474 aa11.64□□□□□ -0.55
PACRG-202ENST00000366888 CASZ1Q86V15 1759 aa11.64□□□□□ -0.55
PACRG-202ENST00000366888 CRB1P82279 1406 aa11.63□□□□□ -0.55
PACRG-202ENST00000366888 SLIT3O75094 1523 aa11.63□□□□□ -0.55
PACRG-202ENST00000366888 NBPF14Q5TI25 921 aa11.63□□□□□ -0.55
PACRG-202ENST00000366888 NLRP13Q86W25 1043 aa11.63□□□□□ -0.55
PACRG-202ENST00000366888 CENPJQ9HC77 1338 aaPredicted RBP11.62□□□□□ -0.55
PACRG-202ENST00000366888 OVOS2A0A0G2JMS6 1433 aa11.62□□□□□ -0.55
PACRG-202ENST00000366888 OVOS2A0A0J9YW53 1432 aa11.62□□□□□ -0.55
PACRG-202ENST00000366888 USP6P35125 1406 aa11.62□□□□□ -0.55
PACRG-202ENST00000366888 OVOS2Q6IE36 1432 aa11.62□□□□□ -0.55
PACRG-202ENST00000366888 PTF1AQ7RTS3 328 aa11.61□□□□□ -0.55
PACRG-202ENST00000366888 THRAP3Q9Y2W1 955 aaKnown RBP11.61□□□□□ -0.55
PACRG-202ENST00000366888 MYOM1P52179 1685 aa11.6□□□□□ -0.55
PACRG-202ENST00000366888 YY1P25490 414 aa11.6□□□□□ -0.55
PACRG-202ENST00000366888 NLRP6P59044 892 aa11.6□□□□□ -0.55
PACRG-202ENST00000366888 CABP1Q9NZU7 370 aa11.6□□□□□ -0.55
PACRG-202ENST00000366888 PPP1R1BQ9UD71 204 aaPredicted RBP11.6□□□□□ -0.55
PACRG-202ENST00000366888 TRPM1Q7Z4N2 1603 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms