RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 FHAD1B1AJZ9 1412 aa13.14□□□□□ -0.31
CDC42BPA-205ENST00000366769 CCDC73Q6ZRK6 1079 aa13.14□□□□□ -0.31
CDC42BPA-205ENST00000366769 USP47Q96K76 1375 aa13.13□□□□□ -0.31
CDC42BPA-205ENST00000366769 ERLIN1O75477 346 aa13.13□□□□□ -0.31
CDC42BPA-205ENST00000366769 SEPT7Q16181 437 aaKnown RBP13.13□□□□□ -0.31
CDC42BPA-205ENST00000366769 GOLIM4O00461 696 aa13.13□□□□□ -0.31
CDC42BPA-205ENST00000366769 NAT10Q9H0A0 1025 aaKnown RBP13.13□□□□□ -0.31
CDC42BPA-205ENST00000366769 LRRFIP2Q9Y608 721 aaKnown RBP13.13□□□□□ -0.31
CDC42BPA-205ENST00000366769 RBM33Q96EV2 1170 aaKnown RBP13.13□□□□□ -0.31
CDC42BPA-205ENST00000366769 IKQ13123 557 aaPredicted RBP13.13□□□□□ -0.31
CDC42BPA-205ENST00000366769 NECTIN2Q92692 538 aa13.13□□□□□ -0.31
CDC42BPA-205ENST00000366769 RNF20Q5VTR2 975 aa13.13□□□□□ -0.31
CDC42BPA-205ENST00000366769 RASSF4Q9H2L5 321 aa13.13□□□□□ -0.31
CDC42BPA-205ENST00000366769 CCDC18Q5T9S5 1454 aa13.12□□□□□ -0.31
CDC42BPA-205ENST00000366769 MPHOSPH10O00566 681 aaKnown RBP13.12□□□□□ -0.31
CDC42BPA-205ENST00000366769 TRDNQ13061 729 aa13.12□□□□□ -0.31
CDC42BPA-205ENST00000366769 PPM1FP49593 454 aaPredicted RBP13.12□□□□□ -0.31
CDC42BPA-205ENST00000366769 GTF3C6Q969F1 213 aa13.12□□□□□ -0.31
CDC42BPA-205ENST00000366769 CCDC192P0DO97 292 aa13.12□□□□□ -0.31
CDC42BPA-205ENST00000366769 SLC26A8Q96RN1 970 aa13.12□□□□□ -0.31
CDC42BPA-205ENST00000366769 ENOX2Q16206 610 aaKnown RBP13.12□□□□□ -0.31
CDC42BPA-205ENST00000366769 TNPO1Q92973 898 aaKnown RBP13.12□□□□□ -0.31
CDC42BPA-205ENST00000366769 SMC3Q9UQE7 1217 aa13.12□□□□□ -0.31
CDC42BPA-205ENST00000366769 PHF23Q9BUL5 403 aaPredicted RBP13.12□□□□□ -0.31
CDC42BPA-205ENST00000366769 LRRFIP1Q32MZ4 808 aaKnown RBP13.11□□□□□ -0.31
CDC42BPA-205ENST00000366769 CCAR1Q8IX12 1150 aaKnown RBP13.11□□□□□ -0.31
CDC42BPA-205ENST00000366769 MYO6Q9UM54 1294 aa13.11□□□□□ -0.31
CDC42BPA-205ENST00000366769 FAM107BQ9H098 131 aa13.11□□□□□ -0.31
CDC42BPA-205ENST00000366769 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.11□□□□□ -0.31
CDC42BPA-205ENST00000366769 DMTNQ08495 405 aa13.11□□□□□ -0.31
CDC42BPA-205ENST00000366769 NUTM2DQ5VT03 806 aaPredicted RBP13.11□□□□□ -0.31
CDC42BPA-205ENST00000366769 ZKSCAN2Q63HK3 967 aa13.11□□□□□ -0.31
CDC42BPA-205ENST00000366769 WWC2Q6AWC2 1192 aa13.11□□□□□ -0.31
CDC42BPA-205ENST00000366769 TNMDQ9H2S6 317 aa13.11□□□□□ -0.31
CDC42BPA-205ENST00000366769 GOLGA6L10A6NI86 522 aa13.11□□□□□ -0.31
CDC42BPA-205ENST00000366769 ELL2O00472 640 aaPredicted RBP13.11□□□□□ -0.31
CDC42BPA-205ENST00000366769 CDC45O75419 566 aa13.11□□□□□ -0.31
CDC42BPA-205ENST00000366769 SHTN1A0MZ66 631 aa13.11□□□□□ -0.31
CDC42BPA-205ENST00000366769 UBXN4Q92575 508 aa13.11□□□□□ -0.31
CDC42BPA-205ENST00000366769 CHMP4CQ96CF2 233 aa13.11□□□□□ -0.31
CDC42BPA-205ENST00000366769 C9orf78Q9NZ63 289 aaPredicted RBP13.11□□□□□ -0.31
CDC42BPA-205ENST00000366769 SSFA2P28290 1259 aa13.1□□□□□ -0.31
CDC42BPA-205ENST00000366769 ARID4AP29374 1257 aaPredicted RBP13.1□□□□□ -0.31
CDC42BPA-205ENST00000366769 LIG1P18858 919 aa13.1□□□□□ -0.31
CDC42BPA-205ENST00000366769 CDCA7LQ96GN5 454 aa13.1□□□□□ -0.31
CDC42BPA-205ENST00000366769 MYCBPQ99417 103 aaPredicted RBP13.1□□□□□ -0.31
CDC42BPA-205ENST00000366769 SAFBQ15424 915 aaKnown RBP eCLIP13.1□□□□□ -0.31
CDC42BPA-205ENST00000366769 C1orf141Q5JVX7 400 aa13.09□□□□□ -0.31
CDC42BPA-205ENST00000366769 ERICH2A1L162 156 aa13.09□□□□□ -0.31
CDC42BPA-205ENST00000366769 EIF2S2P20042 333 aaKnown RBP13.09□□□□□ -0.31
CDC42BPA-205ENST00000366769 EIF3AQ14152 1382 aaKnown RBP13.09□□□□□ -0.31
CDC42BPA-205ENST00000366769 LRCH2Q5VUJ6 765 aa13.08□□□□□ -0.31
CDC42BPA-205ENST00000366769 PRIMPOLQ96LW4 560 aa13.08□□□□□ -0.31
CDC42BPA-205ENST00000366769 CPSF2Q9P2I0 782 aaKnown RBP13.08□□□□□ -0.31
CDC42BPA-205ENST00000366769 USP25Q9UHP3 1055 aa13.08□□□□□ -0.31
CDC42BPA-205ENST00000366769 CAMK4Q16566 473 aa13.08□□□□□ -0.32
CDC42BPA-205ENST00000366769 OLFM4Q6UX06 510 aa13.08□□□□□ -0.32
CDC42BPA-205ENST00000366769 KIF20AO95235 890 aa13.08□□□□□ -0.32
CDC42BPA-205ENST00000366769 GOLGA6L7A0A1B0GV03 622 aa13.08□□□□□ -0.32
CDC42BPA-205ENST00000366769 TRMT1Q9NXH9 659 aaKnown RBP13.08□□□□□ -0.32
CDC42BPA-205ENST00000366769 PDZRN3Q9UPQ7 1066 aa13.08□□□□□ -0.32
CDC42BPA-205ENST00000366769 K7ELQ4 463 aaPredicted RBP13.08□□□□□ -0.32
CDC42BPA-205ENST00000366769 WASHC2CQ9Y4E1 1318 aa13.08□□□□□ -0.32
CDC42BPA-205ENST00000366769 SSR1P43307 286 aaKnown RBP13.08□□□□□ -0.32
CDC42BPA-205ENST00000366769 CEBPZQ03701 1054 aaKnown RBP13.08□□□□□ -0.32
CDC42BPA-205ENST00000366769 RUFY2Q8WXA3 655 aa13.07□□□□□ -0.32
CDC42BPA-205ENST00000366769 WRNQ14191 1432 aaPredicted RBP eCLIP13.07□□□□□ -0.32
CDC42BPA-205ENST00000366769 MCM5P33992 734 aa13.07□□□□□ -0.32
CDC42BPA-205ENST00000366769 BRPF1P55201 1214 aaPredicted RBP13.07□□□□□ -0.32
CDC42BPA-205ENST00000366769 NAA25Q14CX7 972 aa13.07□□□□□ -0.32
CDC42BPA-205ENST00000366769 RABEP1Q15276 862 aa13.07□□□□□ -0.32
CDC42BPA-205ENST00000366769 C17orf53Q8N3J3 647 aaPredicted RBP13.07□□□□□ -0.32
CDC42BPA-205ENST00000366769 CCDC7Q96M83 1385 aa13.07□□□□□ -0.32
CDC42BPA-205ENST00000366769 ZKSCAN1P17029 563 aaPredicted RBP13.07□□□□□ -0.32
CDC42BPA-205ENST00000366769 L3MBTL2Q969R5 705 aa13.07□□□□□ -0.32
CDC42BPA-205ENST00000366769 CEP57Q86XR8 500 aa13.07□□□□□ -0.32
CDC42BPA-205ENST00000366769 KIF7Q2M1P5 1343 aa13.07□□□□□ -0.32
CDC42BPA-205ENST00000366769 SCLT1Q96NL6 688 aa13.07□□□□□ -0.32
CDC42BPA-205ENST00000366769 TBC1D2Q9BYX2 928 aa13.06□□□□□ -0.32
CDC42BPA-205ENST00000366769 PTPN14Q15678 1187 aa13.06□□□□□ -0.32
CDC42BPA-205ENST00000366769 CLASRPQ8N2M8 674 aaKnown RBP13.06□□□□□ -0.32
CDC42BPA-205ENST00000366769 DCAF8L1A6NGE4 600 aa13.06□□□□□ -0.32
CDC42BPA-205ENST00000366769 ATP2C2O75185 946 aa13.06□□□□□ -0.32
CDC42BPA-205ENST00000366769 IFIT2P09913 472 aaKnown RBP13.06□□□□□ -0.32
CDC42BPA-205ENST00000366769 TAX1BP1Q86VP1 789 aa13.06□□□□□ -0.32
CDC42BPA-205ENST00000366769 ZSCAN23Q3MJ62 389 aa13.05□□□□□ -0.32
CDC42BPA-205ENST00000366769 ADCY5O95622 1261 aa13.05□□□□□ -0.32
CDC42BPA-205ENST00000366769 ATP2B1P20020 1258 aa13.05□□□□□ -0.32
CDC42BPA-205ENST00000366769 NEBLO76041 1014 aa13.05□□□□□ -0.32
CDC42BPA-205ENST00000366769 CTR9Q6PD62 1173 aa13.05□□□□□ -0.32
CDC42BPA-205ENST00000366769 DZIP1LQ8IYY4 767 aaKnown RBP13.05□□□□□ -0.32
CDC42BPA-205ENST00000366769 A0A1B0GUL7 405 aa13.05□□□□□ -0.32
CDC42BPA-205ENST00000366769 KINO60870 393 aaKnown RBP13.05□□□□□ -0.32
CDC42BPA-205ENST00000366769 GBP6Q6ZN66 633 aa13.05□□□□□ -0.32
CDC42BPA-205ENST00000366769 NEXNQ0ZGT2 675 aa13.05□□□□□ -0.32
CDC42BPA-205ENST00000366769 TSC1Q92574 1164 aa13.05□□□□□ -0.32
CDC42BPA-205ENST00000366769 EIF4G1Q04637 1599 aaKnown RBP13.05□□□□□ -0.32
CDC42BPA-205ENST00000366769 EZRP15311 586 aaKnown RBP13.04□□□□□ -0.32
CDC42BPA-205ENST00000366769 CEP135Q66GS9 1140 aa13.04□□□□□ -0.32
CDC42BPA-205ENST00000366769 KIF18AQ8NI77 898 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms