RNA–Protein interactions for RNA: ENST00000366683.3

ACTA1-201, Transcript of actin, alpha 1, skeletal muscle, humanhuman

TSL 5 BASIC

Gene ACTA1, Length 1,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA1-201ENST00000366683 TOPAZ1Q8N9V7 1692 aa22.52■■□□□ 1.2
ACTA1-201ENST00000366683 NBPF8Q3BBV2 869 aa22.52■■□□□ 1.2
ACTA1-201ENST00000366683 QRICH2Q9H0J4 1663 aa22.52■■□□□ 1.2
ACTA1-201ENST00000366683 TRIM26Q12899 539 aaPredicted RBP22.51■■□□□ 1.19
ACTA1-201ENST00000366683 CABP2Q9NPB3 220 aa22.51■■□□□ 1.19
ACTA1-201ENST00000366683 RALGAPBQ86X10 1494 aa22.51■■□□□ 1.19
ACTA1-201ENST00000366683 POLR3AO14802 1390 aaPredicted RBP22.5■■□□□ 1.19
ACTA1-201ENST00000366683 ATAD2Q6PL18 1390 aa22.5■■□□□ 1.19
ACTA1-201ENST00000366683 VPS72Q15906 364 aa22.5■■□□□ 1.19
ACTA1-201ENST00000366683 GLI3P10071 1580 aa22.5■■□□□ 1.19
ACTA1-201ENST00000366683 CCDC9Q9Y3X0 531 aaKnown RBP22.49■■□□□ 1.19
ACTA1-201ENST00000366683 ROCK2O75116 1388 aaKnown RBP22.49■■□□□ 1.19
ACTA1-201ENST00000366683 BTG4Q9NY30 223 aa22.47■■□□□ 1.19
ACTA1-201ENST00000366683 CRYBG1Q9Y4K1 1723 aa22.47■■□□□ 1.19
ACTA1-201ENST00000366683 NUTM2GQ5VZR2 741 aa22.46■■□□□ 1.19
ACTA1-201ENST00000366683 PPIP5K1Q6PFW1 1433 aa22.46■■□□□ 1.19
ACTA1-201ENST00000366683 COL14A1Q05707 1796 aaKnown RBP22.45■■□□□ 1.19
ACTA1-201ENST00000366683 EVC2Q86UK5 1308 aa22.44■■□□□ 1.18
ACTA1-201ENST00000366683 SEPT12Q8IYM1 358 aa22.43■■□□□ 1.18
ACTA1-201ENST00000366683 ABTB2Q8N961 1025 aa22.43■■□□□ 1.18
ACTA1-201ENST00000366683 PRDM11Q9NQV5 511 aa22.43■■□□□ 1.18
ACTA1-201ENST00000366683 CABP1Q9NZU7 370 aa22.43■■□□□ 1.18
ACTA1-201ENST00000366683 BRWD3Q6RI45 1802 aa22.43■■□□□ 1.18
ACTA1-201ENST00000366683 ONECUT3O60422 494 aaPredicted RBP22.42■■□□□ 1.18
ACTA1-201ENST00000366683 NRAPQ86VF7 1730 aa22.42■■□□□ 1.18
ACTA1-201ENST00000366683 TONSLQ96HA7 1378 aa22.4■■□□□ 1.18
ACTA1-201ENST00000366683 PHRF1Q9P1Y6 1649 aaKnown RBP22.4■■□□□ 1.18
ACTA1-201ENST00000366683 KIAA0232Q92628 1395 aa22.39■■□□□ 1.18
ACTA1-201ENST00000366683 ZC3H6P61129 1189 aaKnown RBP22.39■■□□□ 1.17
ACTA1-201ENST00000366683 CCDC125Q86Z20 511 aa22.38■■□□□ 1.17
ACTA1-201ENST00000366683 CARD11Q9BXL7 1154 aa22.38■■□□□ 1.17
ACTA1-201ENST00000366683 CHRNA2Q15822 529 aa22.37■■□□□ 1.17
ACTA1-201ENST00000366683 NLRP13Q86W25 1043 aa22.37■■□□□ 1.17
ACTA1-201ENST00000366683 BRD4O60885 1362 aaPredicted RBP22.37■■□□□ 1.17
ACTA1-201ENST00000366683 FAM98CQ17RN3 349 aaKnown RBP22.36■■□□□ 1.17
ACTA1-201ENST00000366683 EP400Q96L91 3159 aa22.35■■□□□ 1.17
ACTA1-201ENST00000366683 A0A0G2JS52 829 aa22.35■■□□□ 1.17
ACTA1-201ENST00000366683 MYT1Q01538 1121 aa22.35■■□□□ 1.17
ACTA1-201ENST00000366683 SPATA31A5Q5VU36 1347 aa22.34■■□□□ 1.17
ACTA1-201ENST00000366683 SPATA31A7Q8IWB4 1347 aa22.34■■□□□ 1.17
ACTA1-201ENST00000366683 KRT27Q7Z3Y8 459 aa22.34■■□□□ 1.17
ACTA1-201ENST00000366683 USP19O94966 1318 aa22.33■■□□□ 1.17
ACTA1-201ENST00000366683 USP6P35125 1406 aa22.33■■□□□ 1.17
ACTA1-201ENST00000366683 GCP02774 474 aa22.32■■□□□ 1.16
ACTA1-201ENST00000366683 ZNF692Q9BU19 519 aaPredicted RBP22.32■■□□□ 1.16
ACTA1-201ENST00000366683 STRN4Q9NRL3 753 aa22.32■■□□□ 1.16
ACTA1-201ENST00000366683 NRKQ7Z2Y5 1582 aa22.31■■□□□ 1.16
ACTA1-201ENST00000366683 EVA1CP58658 441 aa22.31■■□□□ 1.16
ACTA1-201ENST00000366683 NLRP6P59044 892 aa22.31■■□□□ 1.16
ACTA1-201ENST00000366683 CPDO75976 1380 aa22.29■■□□□ 1.16
ACTA1-201ENST00000366683 SPATA31A1Q5TZJ5 1347 aa22.29■■□□□ 1.16
ACTA1-201ENST00000366683 SBNO2Q9Y2G9 1366 aa22.28■■□□□ 1.16
ACTA1-201ENST00000366683 BLMP54132 1417 aaPredicted RBP22.28■■□□□ 1.16
ACTA1-201ENST00000366683 SSH2Q76I76 1423 aa22.28■■□□□ 1.16
ACTA1-201ENST00000366683 AKAP12Q02952 1782 aa22.27■■□□□ 1.16
ACTA1-201ENST00000366683 SF3B2Q13435 895 aaKnown RBP22.26■■□□□ 1.15
ACTA1-201ENST00000366683 CAMTA1Q9Y6Y1 1673 aa22.26■■□□□ 1.15
ACTA1-201ENST00000366683 TTC21BQ7Z4L5 1316 aa22.26■■□□□ 1.15
ACTA1-201ENST00000366683 PIK3C2AO00443 1686 aa22.24■■□□□ 1.15
ACTA1-201ENST00000366683 ZBTB7CA1YPR0 619 aa22.24■■□□□ 1.15
ACTA1-201ENST00000366683 USP35Q9P2H5 1018 aa22.24■■□□□ 1.15
ACTA1-201ENST00000366683 LMO7Q8WWI1 1683 aa22.23■■□□□ 1.15
ACTA1-201ENST00000366683 CPSF1Q10570 1443 aaKnown RBP22.23■■□□□ 1.15
ACTA1-201ENST00000366683 LARP1Q6PKG0 1096 aaKnown RBP22.23■■□□□ 1.15
ACTA1-201ENST00000366683 THSD7AQ9UPZ6 1657 aa22.23■■□□□ 1.15
ACTA1-201ENST00000366683 KTN1Q86UP2 1357 aaKnown RBP22.23■■□□□ 1.15
ACTA1-201ENST00000366683 TTC21AQ8NDW8 1320 aa22.22■■□□□ 1.15
ACTA1-201ENST00000366683 SLIT3O75094 1523 aa22.21■■□□□ 1.15
ACTA1-201ENST00000366683 TMC1Q8TDI8 760 aa22.21■■□□□ 1.15
ACTA1-201ENST00000366683 ZRANB1Q9UGI0 708 aa22.21■■□□□ 1.15
ACTA1-201ENST00000366683 FAM182BQ5T319 152 aa22.2■■□□□ 1.14
ACTA1-201ENST00000366683 DEFB132Q7Z7B7 95 aa22.2■■□□□ 1.14
ACTA1-201ENST00000366683 BARGINQ6ZT62 677 aa22.19■■□□□ 1.14
ACTA1-201ENST00000366683 KCNH5Q8NCM2 988 aa22.19■■□□□ 1.14
ACTA1-201ENST00000366683 AATKQ6ZMQ8 1374 aa22.18■■□□□ 1.14
ACTA1-201ENST00000366683 ST20-MTHFSA0A0A6YYL1 179 aa22.18■■□□□ 1.14
ACTA1-201ENST00000366683 TCP11L2Q8N4U5 519 aa22.18■■□□□ 1.14
ACTA1-201ENST00000366683 SLC12A5Q9H2X9 1139 aa22.18■■□□□ 1.14
ACTA1-201ENST00000366683 MON2Q7Z3U7 1717 aa22.17■■□□□ 1.14
ACTA1-201ENST00000366683 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.17■■□□□ 1.14
ACTA1-201ENST00000366683 PUS7Q96PZ0 661 aaKnown RBP22.17■■□□□ 1.14
ACTA1-201ENST00000366683 THRAP3Q9Y2W1 955 aaKnown RBP22.17■■□□□ 1.14
ACTA1-201ENST00000366683 COL5A2P05997 1499 aaPredicted RBP22.16■■□□□ 1.14
ACTA1-201ENST00000366683 HDGFL2Q7Z4V5 671 aaPredicted RBP22.16■■□□□ 1.14
ACTA1-201ENST00000366683 SOX12O15370 315 aa22.15■■□□□ 1.14
ACTA1-201ENST00000366683 SLC24A1O60721 1099 aa22.15■■□□□ 1.14
ACTA1-201ENST00000366683 TESK2Q96S53 571 aa22.15■■□□□ 1.14
ACTA1-201ENST00000366683 COL18A1P39060 1754 aa22.15■■□□□ 1.14
ACTA1-201ENST00000366683 PDE3BQ13370 1112 aa22.14■■□□□ 1.13
ACTA1-201ENST00000366683 ARHGEF25Q86VW2 580 aa22.14■■□□□ 1.13
ACTA1-201ENST00000366683 PCGF6Q9BYE7 350 aa22.14■■□□□ 1.13
ACTA1-201ENST00000366683 AXIN2Q9Y2T1 843 aa22.14■■□□□ 1.13
ACTA1-201ENST00000366683 CD163L1Q9NR16 1453 aa22.14■■□□□ 1.13
ACTA1-201ENST00000366683 BAG6P46379 1132 aa22.13■■□□□ 1.13
ACTA1-201ENST00000366683 TERF2IPQ9NYB0 399 aa22.13■■□□□ 1.13
ACTA1-201ENST00000366683 CRB1P82279 1406 aa22.13■■□□□ 1.13
ACTA1-201ENST00000366683 RGPD1P0DJD0 1748 aa22.12■■□□□ 1.13
ACTA1-201ENST00000366683 FAM196AQ6ZSG2 479 aa22.12■■□□□ 1.13
ACTA1-201ENST00000366683 RGPD5Q99666 1765 aa22.12■■□□□ 1.13
ACTA1-201ENST00000366683 TOM1L2Q6ZVM7 507 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms