RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 SKOR1P84550 965 aa9.28□□□□□ -0.92
RNU6-553P-201ENST00000364047 LINC01559Q495D7 138 aa9.28□□□□□ -0.92
RNU6-553P-201ENST00000364047 LRRN4Q8WUT4 740 aa9.27□□□□□ -0.93
RNU6-553P-201ENST00000364047 BAP1Q92560 729 aa9.27□□□□□ -0.93
RNU6-553P-201ENST00000364047 SH3BP2P78314 561 aa9.26□□□□□ -0.93
RNU6-553P-201ENST00000364047 RC3H1Q5TC82 1133 aaKnown RBP9.26□□□□□ -0.93
RNU6-553P-201ENST00000364047 Q6ZNB5 142 aa9.26□□□□□ -0.93
RNU6-553P-201ENST00000364047 MRGPRX2Q96LB1 330 aa9.26□□□□□ -0.93
RNU6-553P-201ENST00000364047 USP17L8P0C7I0 530 aa9.25□□□□□ -0.93
RNU6-553P-201ENST00000364047 CYP4X1Q8N118 509 aa9.25□□□□□ -0.93
RNU6-553P-201ENST00000364047 ZNF511Q8NB15 262 aa9.25□□□□□ -0.93
RNU6-553P-201ENST00000364047 TMEM259Q4ZIN3 620 aa9.23□□□□□ -0.93
RNU6-553P-201ENST00000364047 EHBP1Q8NDI1 1231 aa9.23□□□□□ -0.93
RNU6-553P-201ENST00000364047 TTC24A2A3L6 582 aaPredicted RBP9.22□□□□□ -0.93
RNU6-553P-201ENST00000364047 FAM187AA6NFU0 413 aa9.22□□□□□ -0.93
RNU6-553P-201ENST00000364047 PKDCCQ504Y2 493 aa9.22□□□□□ -0.93
RNU6-553P-201ENST00000364047 ARMC2Q8NEN0 867 aa9.22□□□□□ -0.93
RNU6-553P-201ENST00000364047 TOR4AQ9NXH8 423 aa9.22□□□□□ -0.93
RNU6-553P-201ENST00000364047 SNIP1Q8TAD8 396 aaKnown RBP9.21□□□□□ -0.94
RNU6-553P-201ENST00000364047 HMX1Q9NP08 348 aaPredicted RBP9.21□□□□□ -0.94
RNU6-553P-201ENST00000364047 AGERQ15109 404 aa9.2□□□□□ -0.94
RNU6-553P-201ENST00000364047 NR6A1Q15406 480 aa9.2□□□□□ -0.94
RNU6-553P-201ENST00000364047 NBPF14Q5TI25 921 aa9.2□□□□□ -0.94
RNU6-553P-201ENST00000364047 DGAT1O75907 488 aa9.19□□□□□ -0.94
RNU6-553P-201ENST00000364047 FOXJ1Q92949 421 aa9.19□□□□□ -0.94
RNU6-553P-201ENST00000364047 FKBPLQ9UIM3 349 aa9.18□□□□□ -0.94
RNU6-553P-201ENST00000364047 SIAH2O43255 324 aa9.17□□□□□ -0.94
RNU6-553P-201ENST00000364047 VARSP26640 1264 aaKnown RBP9.17□□□□□ -0.94
RNU6-553P-201ENST00000364047 BPHLQ86WA6 291 aaPredicted RBP9.17□□□□□ -0.94
RNU6-553P-201ENST00000364047 EPS8L1Q8TE68 723 aa9.17□□□□□ -0.94
RNU6-553P-201ENST00000364047 J3QL48 77 aa9.16□□□□□ -0.94
RNU6-553P-201ENST00000364047 ALDH1A1P00352 501 aa9.16□□□□□ -0.94
RNU6-553P-201ENST00000364047 SMPD1P17405 629 aa9.16□□□□□ -0.94
RNU6-553P-201ENST00000364047 TRAF7Q6Q0C0 670 aa9.16□□□□□ -0.94
RNU6-553P-201ENST00000364047 GPKOWQ92917 476 aaPredicted RBP eCLIP9.16□□□□□ -0.94
RNU6-553P-201ENST00000364047 C4orf48Q5BLP8 95 aa9.15□□□□□ -0.94
RNU6-553P-201ENST00000364047 PNMA1Q8ND90 353 aa9.15□□□□□ -0.94
RNU6-553P-201ENST00000364047 BANK1Q8NDB2 785 aa9.15□□□□□ -0.94
RNU6-553P-201ENST00000364047 FAM174AQ8TBP5 190 aa9.15□□□□□ -0.94
RNU6-553P-201ENST00000364047 TLL2Q9Y6L7 1015 aa9.15□□□□□ -0.94
RNU6-553P-201ENST00000364047 MAGEB6P1A0A0J9YX57 407 aa9.14□□□□□ -0.95
RNU6-553P-201ENST00000364047 SH3BP5LQ7L8J4 393 aa9.14□□□□□ -0.95
RNU6-553P-201ENST00000364047 TRIM34Q9BYJ4 488 aa9.14□□□□□ -0.95
RNU6-553P-201ENST00000364047 ZC3H4Q9UPT8 1303 aaKnown RBP9.13□□□□□ -0.95
RNU6-553P-201ENST00000364047 LCE2BO14633 110 aa9.13□□□□□ -0.95
RNU6-553P-201ENST00000364047 MYT1Q01538 1121 aa9.13□□□□□ -0.95
RNU6-553P-201ENST00000364047 CARD14Q9BXL6 1004 aa9.13□□□□□ -0.95
RNU6-553P-201ENST00000364047 PDXDC2PQ6P474 469 aa9.12□□□□□ -0.95
RNU6-553P-201ENST00000364047 SH3RF1Q7Z6J0 888 aa9.12□□□□□ -0.95
RNU6-553P-201ENST00000364047 ARHGAP9Q9BRR9 750 aa9.12□□□□□ -0.95
RNU6-553P-201ENST00000364047 WASF2Q9Y6W5 498 aa9.12□□□□□ -0.95
RNU6-553P-201ENST00000364047 ARID5BQ14865 1188 aa9.11□□□□□ -0.95
RNU6-553P-201ENST00000364047 MTMR14Q8NCE2 650 aa9.11□□□□□ -0.95
RNU6-553P-201ENST00000364047 GJD4Q96KN9 370 aaPredicted RBP9.11□□□□□ -0.95
RNU6-553P-201ENST00000364047 SNRKQ9NRH2 765 aa9.11□□□□□ -0.95
RNU6-553P-201ENST00000364047 AVPP01185 164 aa9.1□□□□□ -0.95
RNU6-553P-201ENST00000364047 C1QTNF2Q9BXJ5 285 aa9.1□□□□□ -0.95
RNU6-553P-201ENST00000364047 PTK2Q05397 1052 aa9.09□□□□□ -0.95
RNU6-553P-201ENST00000364047 MPNDQ8N594 471 aa9.09□□□□□ -0.95
RNU6-553P-201ENST00000364047 HPS1Q92902 700 aa9.09□□□□□ -0.95
RNU6-553P-201ENST00000364047 APBB1O00213 710 aa9.08□□□□□ -0.96
RNU6-553P-201ENST00000364047 SOCS7O14512 581 aa9.08□□□□□ -0.96
RNU6-553P-201ENST00000364047 ST8SIA5O15466 376 aa9.08□□□□□ -0.96
RNU6-553P-201ENST00000364047 TMEM132AQ24JP5 1023 aa9.08□□□□□ -0.96
RNU6-553P-201ENST00000364047 ERFEQ4G0M1 354 aa9.08□□□□□ -0.96
RNU6-553P-201ENST00000364047 ZBTB33Q86T24 672 aa9.08□□□□□ -0.96
RNU6-553P-201ENST00000364047 CDK15Q96Q40 435 aa9.08□□□□□ -0.96
RNU6-553P-201ENST00000364047 GPSM3Q9Y4H4 160 aa9.08□□□□□ -0.96
RNU6-553P-201ENST00000364047 ADH1CP00326 375 aa9.07□□□□□ -0.96
RNU6-553P-201ENST00000364047 CTC1Q2NKJ3 1217 aa9.07□□□□□ -0.96
RNU6-553P-201ENST00000364047 TRMT44Q8IYL2 757 aaKnown RBP9.07□□□□□ -0.96
RNU6-553P-201ENST00000364047 CRIPAKQ8N1N5 446 aa9.07□□□□□ -0.96
RNU6-553P-201ENST00000364047 AAASQ9NRG9 546 aa9.07□□□□□ -0.96
RNU6-553P-201ENST00000364047 AXIN1O15169 862 aa9.06□□□□□ -0.96
RNU6-553P-201ENST00000364047 NNTQ13423 1086 aa9.06□□□□□ -0.96
RNU6-553P-201ENST00000364047 OCSTAMPQ9BR26 566 aa9.06□□□□□ -0.96
RNU6-553P-201ENST00000364047 NDUFB9Q9Y6M9 179 aa9.06□□□□□ -0.96
RNU6-553P-201ENST00000364047 VASH1Q7L8A9 365 aaPredicted RBP9.05□□□□□ -0.96
RNU6-553P-201ENST00000364047 ADAM32Q8TC27 787 aa9.05□□□□□ -0.96
RNU6-553P-201ENST00000364047 SLC10A4Q96EP9 437 aa9.05□□□□□ -0.96
RNU6-553P-201ENST00000364047 SMCPP49901 116 aaPredicted RBP9.04□□□□□ -0.96
RNU6-553P-201ENST00000364047 MAP4K5Q9Y4K4 846 aa9.04□□□□□ -0.96
RNU6-553P-201ENST00000364047 FSHRP23945 695 aa9.03□□□□□ -0.96
RNU6-553P-201ENST00000364047 NR5A1Q13285 461 aa9.03□□□□□ -0.96
RNU6-553P-201ENST00000364047 ZBBXA8MT70 800 aa9.02□□□□□ -0.97
RNU6-553P-201ENST00000364047 GRM5P41594 1212 aa9.02□□□□□ -0.97
RNU6-553P-201ENST00000364047 CAPN5O15484 640 aaPredicted RBP9.01□□□□□ -0.97
RNU6-553P-201ENST00000364047 GPR37L1O60883 481 aa9.01□□□□□ -0.97
RNU6-553P-201ENST00000364047 MCM6Q14566 821 aa9.01□□□□□ -0.97
RNU6-553P-201ENST00000364047 PRM3Q9NNZ6 103 aa9.01□□□□□ -0.97
RNU6-553P-201ENST00000364047 CDV3Q9UKY7 258 aaKnown RBP9.01□□□□□ -0.97
RNU6-553P-201ENST00000364047 TBC1D2BQ9UPU7 963 aa9.01□□□□□ -0.97
RNU6-553P-201ENST00000364047 NR3C2P08235 984 aa9□□□□□ -0.97
RNU6-553P-201ENST00000364047 FBXO45P0C2W1 286 aa9□□□□□ -0.97
RNU6-553P-201ENST00000364047 DZIP3Q86Y13 1208 aaKnown RBP9□□□□□ -0.97
RNU6-553P-201ENST00000364047 DACH1Q9UI36 760 aa9□□□□□ -0.97
RNU6-553P-201ENST00000364047 WDR4P57081 412 aaKnown RBP8.99□□□□□ -0.97
RNU6-553P-201ENST00000364047 KCTD15Q96SI1 283 aaPredicted RBP8.99□□□□□ -0.97
RNU6-553P-201ENST00000364047 TIMP2P16035 220 aa8.98□□□□□ -0.97
RNU6-553P-201ENST00000364047 NR1H3Q13133 447 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms