RNA–Protein interactions for RNA: ENST00000364005.1

RNU6-340P-201, Transcript of RNA, U6 small nuclear 340, pseudogene, humanhuman

BASIC

Gene RNU6-340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-340P-201ENST00000364005 CCDC24Q8N4L8 307 aa2.51□□□□□ -2.01
RNU6-340P-201ENST00000364005 SALL2Q9Y467 1007 aaPredicted RBP2.51□□□□□ -2.01
RNU6-340P-201ENST00000364005 SOS2Q07890 1332 aaPredicted RBP2.5□□□□□ -2.01
RNU6-340P-201ENST00000364005 CDC14CA4D256 554 aa2.5□□□□□ -2.01
RNU6-340P-201ENST00000364005 BMP2P12643 396 aa2.5□□□□□ -2.01
RNU6-340P-201ENST00000364005 MMP16P51512 607 aa2.5□□□□□ -2.01
RNU6-340P-201ENST00000364005 NNTQ13423 1086 aa2.5□□□□□ -2.01
RNU6-340P-201ENST00000364005 SV2AQ7L0J3 742 aa2.5□□□□□ -2.01
RNU6-340P-201ENST00000364005 SH3RF1Q7Z6J0 888 aa2.5□□□□□ -2.01
RNU6-340P-201ENST00000364005 CCDC155Q8N6L0 562 aa2.5□□□□□ -2.01
RNU6-340P-201ENST00000364005 RBM46Q8TBY0 533 aaKnown RBP2.5□□□□□ -2.01
RNU6-340P-201ENST00000364005 SPDYE16A6NNV3 312 aaPredicted RBP2.49□□□□□ -2.01
RNU6-340P-201ENST00000364005 ADH1CP00326 375 aa2.49□□□□□ -2.01
RNU6-340P-201ENST00000364005 ATP6V1AP38606 617 aa2.49□□□□□ -2.01
RNU6-340P-201ENST00000364005 FUT2Q10981 343 aa2.49□□□□□ -2.01
RNU6-340P-201ENST00000364005 DOC2BQ14184 412 aa2.49□□□□□ -2.01
RNU6-340P-201ENST00000364005 ZNF800Q2TB10 664 aaPredicted RBP eCLIP2.49□□□□□ -2.01
RNU6-340P-201ENST00000364005 RSPH4AQ5TD94 716 aa2.49□□□□□ -2.01
RNU6-340P-201ENST00000364005 RNF19BQ6ZMZ0 732 aa2.49□□□□□ -2.01
RNU6-340P-201ENST00000364005 KLF16Q9BXK1 252 aaPredicted RBP2.49□□□□□ -2.01
RNU6-340P-201ENST00000364005 C1QTNF9BB2RNN3 333 aa2.48□□□□□ -2.01
RNU6-340P-201ENST00000364005 PAX4O43316 350 aa2.48□□□□□ -2.01
RNU6-340P-201ENST00000364005 COL8A1P27658 744 aa2.48□□□□□ -2.01
RNU6-340P-201ENST00000364005 ALYREFQ86V81 257 aaKnown RBP2.48□□□□□ -2.01
RNU6-340P-201ENST00000364005 UPP2O95045 317 aa2.47□□□□□ -2.01
RNU6-340P-201ENST00000364005 BCRP11274 1271 aa2.47□□□□□ -2.01
RNU6-340P-201ENST00000364005 ITGA6P23229 1130 aa2.47□□□□□ -2.01
RNU6-340P-201ENST00000364005 RGS19P49795 217 aa2.47□□□□□ -2.01
RNU6-340P-201ENST00000364005 PKD2Q13563 968 aa2.47□□□□□ -2.01
RNU6-340P-201ENST00000364005 MCTP1Q6DN14 999 aa2.47□□□□□ -2.01
RNU6-340P-201ENST00000364005 CD163Q86VB7 1156 aa2.47□□□□□ -2.01
RNU6-340P-201ENST00000364005 ZFAND3Q9H8U3 227 aa2.47□□□□□ -2.01
RNU6-340P-201ENST00000364005 ADGRG1Q9Y653 693 aa2.47□□□□□ -2.01
RNU6-340P-201ENST00000364005 TLL2Q9Y6L7 1015 aa2.47□□□□□ -2.01
RNU6-340P-201ENST00000364005 PLEKHG3A1L390 1219 aa2.46□□□□□ -2.02
RNU6-340P-201ENST00000364005 SLC35F4A4IF30 521 aa2.46□□□□□ -2.02
RNU6-340P-201ENST00000364005 DXOO77932 396 aaKnown RBP2.46□□□□□ -2.02
RNU6-340P-201ENST00000364005 ZIC2O95409 532 aaPredicted RBP2.46□□□□□ -2.02
RNU6-340P-201ENST00000364005 CHGAP10645 457 aaKnown RBP2.46□□□□□ -2.02
RNU6-340P-201ENST00000364005 SNRPNP63162 240 aaKnown RBP2.46□□□□□ -2.02
RNU6-340P-201ENST00000364005 GAS6Q14393 721 aa2.46□□□□□ -2.02
RNU6-340P-201ENST00000364005 FAM161AQ3B820 660 aa2.46□□□□□ -2.02
RNU6-340P-201ENST00000364005 CADPS2Q86UW7 1296 aa2.46□□□□□ -2.02
RNU6-340P-201ENST00000364005 LINC00528Q8N1L1 170 aa2.46□□□□□ -2.02
RNU6-340P-201ENST00000364005 FMNL2Q96PY5 1086 aa2.46□□□□□ -2.02
RNU6-340P-201ENST00000364005 FIGNL2A6NMB9 653 aa2.45□□□□□ -2.02
RNU6-340P-201ENST00000364005 TTLL8A6PVC2 850 aa2.45□□□□□ -2.02
RNU6-340P-201ENST00000364005 SH3BP2P78314 561 aa2.45□□□□□ -2.02
RNU6-340P-201ENST00000364005 ITPKCQ96DU7 683 aa2.45□□□□□ -2.02
RNU6-340P-201ENST00000364005 DNAJC5Q9H3Z4 198 aa2.45□□□□□ -2.02
RNU6-340P-201ENST00000364005 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP2.44□□□□□ -2.02
RNU6-340P-201ENST00000364005 CHRNA4P43681 627 aa2.44□□□□□ -2.02
RNU6-340P-201ENST00000364005 GRIN2CQ14957 1233 aa2.44□□□□□ -2.02
RNU6-340P-201ENST00000364005 PTCRAQ6ISU1 281 aaPredicted RBP2.44□□□□□ -2.02
RNU6-340P-201ENST00000364005 MKL2Q9ULH7 1088 aa2.44□□□□□ -2.02
RNU6-340P-201ENST00000364005 HYAL3O43820 417 aaPredicted RBP2.43□□□□□ -2.02
RNU6-340P-201ENST00000364005 GTPBP6O43824 516 aaPredicted RBP2.43□□□□□ -2.02
RNU6-340P-201ENST00000364005 RSPO4Q2I0M5 234 aaPredicted RBP2.43□□□□□ -2.02
RNU6-340P-201ENST00000364005 MPNDQ8N594 471 aa2.43□□□□□ -2.02
RNU6-340P-201ENST00000364005 RDH13Q8NBN7 331 aa2.43□□□□□ -2.02
RNU6-340P-201ENST00000364005 ACDQ96AP0 544 aa2.43□□□□□ -2.02
RNU6-340P-201ENST00000364005 USB1Q9BQ65 265 aaKnown RBP2.43□□□□□ -2.02
RNU6-340P-201ENST00000364005 IGF1RP08069 1367 aa2.43□□□□□ -2.02
RNU6-340P-201ENST00000364005 COL17A1Q9UMD9 1497 aaPredicted RBP2.43□□□□□ -2.02
RNU6-340P-201ENST00000364005 LRP8Q14114 963 aa2.42□□□□□ -2.02
RNU6-340P-201ENST00000364005 Q3C1V9 767 aa2.42□□□□□ -2.02
RNU6-340P-201ENST00000364005 LCE4AQ5TA78 99 aa2.42□□□□□ -2.02
RNU6-340P-201ENST00000364005 MEIOBQ8N635 442 aa2.42□□□□□ -2.02
RNU6-340P-201ENST00000364005 CCER1Q8TC90 406 aaPredicted RBP2.42□□□□□ -2.02
RNU6-340P-201ENST00000364005 SUV39H2Q9H5I1 410 aa2.42□□□□□ -2.02
RNU6-340P-201ENST00000364005 LRRC4BQ9NT99 713 aa2.42□□□□□ -2.02
RNU6-340P-201ENST00000364005 VARSP26640 1264 aaKnown RBP2.41□□□□□ -2.02
RNU6-340P-201ENST00000364005 GCGRP47871 477 aa2.41□□□□□ -2.02
RNU6-340P-201ENST00000364005 NKAPLQ5M9Q1 402 aa2.41□□□□□ -2.02
RNU6-340P-201ENST00000364005 LSRQ86X29 649 aaPredicted RBP2.41□□□□□ -2.02
RNU6-340P-201ENST00000364005 TSEN34Q9BSV6 310 aaKnown RBP2.41□□□□□ -2.02
RNU6-340P-201ENST00000364005 MBIPQ9NS73 344 aa2.41□□□□□ -2.02
RNU6-340P-201ENST00000364005 OIP5O43482 229 aa2.4□□□□□ -2.03
RNU6-340P-201ENST00000364005 NR3C2P08235 984 aa2.4□□□□□ -2.03
RNU6-340P-201ENST00000364005 GATA4P43694 442 aa2.4□□□□□ -2.03
RNU6-340P-201ENST00000364005 PRSS36Q5K4E3 855 aa2.4□□□□□ -2.03
RNU6-340P-201ENST00000364005 RRAGCQ9HB90 399 aa2.4□□□□□ -2.03
RNU6-340P-201ENST00000364005 DDX11L8A8MPP1 907 aa2.39□□□□□ -2.03
RNU6-340P-201ENST00000364005 SPTLC1O15269 473 aa2.39□□□□□ -2.03
RNU6-340P-201ENST00000364005 DYRK3O43781 588 aa2.39□□□□□ -2.03
RNU6-340P-201ENST00000364005 PTGDRQ13258 359 aa2.39□□□□□ -2.03
RNU6-340P-201ENST00000364005 LINC01559Q495D7 138 aa2.39□□□□□ -2.03
RNU6-340P-201ENST00000364005 GRIPAP1Q4V328 841 aa2.39□□□□□ -2.03
RNU6-340P-201ENST00000364005 PXYLP1Q8TE99 480 aa2.39□□□□□ -2.03
RNU6-340P-201ENST00000364005 BAP1Q92560 729 aa2.39□□□□□ -2.03
RNU6-340P-201ENST00000364005 CUEDC1Q9NWM3 386 aaPredicted RBP2.39□□□□□ -2.03
RNU6-340P-201ENST00000364005 SENP3-EIF4A1A0A087X0R7 540 aa2.38□□□□□ -2.03
RNU6-340P-201ENST00000364005 SHISA8B8ZZ34 492 aa2.38□□□□□ -2.03
RNU6-340P-201ENST00000364005 JAG1P78504 1218 aa2.38□□□□□ -2.03
RNU6-340P-201ENST00000364005 ARID5BQ14865 1188 aa2.38□□□□□ -2.03
RNU6-340P-201ENST00000364005 LCE5AQ5TCM9 118 aa2.38□□□□□ -2.03
RNU6-340P-201ENST00000364005 LINC00114Q6XXX2 140 aa2.38□□□□□ -2.03
RNU6-340P-201ENST00000364005 NUDT12Q9BQG2 462 aa2.38□□□□□ -2.03
RNU6-340P-201ENST00000364005 GPR25O00155 361 aa2.37□□□□□ -2.03
RNU6-340P-201ENST00000364005 OATP04181 439 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms