RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 KLF16Q9BXK1 252 aaPredicted RBP6.88□□□□□ -1.31
RNU6-238P-201ENST00000363313 TIMP2P16035 220 aa6.87□□□□□ -1.31
RNU6-238P-201ENST00000363313 KCNMA1Q12791 1236 aa6.87□□□□□ -1.31
RNU6-238P-201ENST00000363313 SPIRE2Q8WWL2 714 aa6.87□□□□□ -1.31
RNU6-238P-201ENST00000363313 SSTR3P32745 418 aaPredicted RBP6.86□□□□□ -1.31
RNU6-238P-201ENST00000363313 NR5A1Q13285 461 aa6.86□□□□□ -1.31
RNU6-238P-201ENST00000363313 MTMR2Q13614 643 aa6.86□□□□□ -1.31
RNU6-238P-201ENST00000363313 PRR7Q8TB68 274 aa6.86□□□□□ -1.31
RNU6-238P-201ENST00000363313 WDR4P57081 412 aaKnown RBP6.85□□□□□ -1.31
RNU6-238P-201ENST00000363313 VEGFBP49765 207 aa6.84□□□□□ -1.31
RNU6-238P-201ENST00000363313 LYPD8Q6UX82 237 aa6.84□□□□□ -1.31
RNU6-238P-201ENST00000363313 TLL2Q9Y6L7 1015 aa6.84□□□□□ -1.31
RNU6-238P-201ENST00000363313 SPTLC1O15269 473 aa6.83□□□□□ -1.32
RNU6-238P-201ENST00000363313 LINC01559Q495D7 138 aa6.83□□□□□ -1.32
RNU6-238P-201ENST00000363313 PURBQ96QR8 312 aaKnown RBP6.83□□□□□ -1.32
RNU6-238P-201ENST00000363313 MOXD2PA6NHM9 499 aa6.82□□□□□ -1.32
RNU6-238P-201ENST00000363313 UPP2O95045 317 aa6.81□□□□□ -1.32
RNU6-238P-201ENST00000363313 AMHR2Q16671 573 aa6.81□□□□□ -1.32
RNU6-238P-201ENST00000363313 MAN1A2O60476 641 aa6.8□□□□□ -1.32
RNU6-238P-201ENST00000363313 PPFIA3O75145 1194 aa6.8□□□□□ -1.32
RNU6-238P-201ENST00000363313 NDUFV2P19404 249 aa6.8□□□□□ -1.32
RNU6-238P-201ENST00000363313 PRPF38BQ5VTL8 546 aaKnown RBP6.8□□□□□ -1.32
RNU6-238P-201ENST00000363313 ARMC2Q8NEN0 867 aa6.8□□□□□ -1.32
RNU6-238P-201ENST00000363313 RNF225M0QZC1 329 aaPredicted RBP6.79□□□□□ -1.32
RNU6-238P-201ENST00000363313 ZIC2O95409 532 aaPredicted RBP6.79□□□□□ -1.32
RNU6-238P-201ENST00000363313 CTHP32929 405 aa6.79□□□□□ -1.32
RNU6-238P-201ENST00000363313 BPHLQ86WA6 291 aaPredicted RBP6.79□□□□□ -1.32
RNU6-238P-201ENST00000363313 F12P00748 615 aaPredicted RBP6.78□□□□□ -1.32
RNU6-238P-201ENST00000363313 GRM5P41594 1212 aa6.78□□□□□ -1.32
RNU6-238P-201ENST00000363313 SUZ12Q15022 739 aaKnown RBP6.78□□□□□ -1.32
RNU6-238P-201ENST00000363313 KDM2AQ9Y2K7 1162 aa6.78□□□□□ -1.32
RNU6-238P-201ENST00000363313 MAP4K5Q9Y4K4 846 aa6.78□□□□□ -1.32
RNU6-238P-201ENST00000363313 RSBN1LQ6PCB5 846 aaPredicted RBP6.77□□□□□ -1.33
RNU6-238P-201ENST00000363313 BARGINQ6ZT62 677 aa6.77□□□□□ -1.33
RNU6-238P-201ENST00000363313 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.77□□□□□ -1.33
RNU6-238P-201ENST00000363313 VSIG10Q8N0Z9 540 aa6.77□□□□□ -1.33
RNU6-238P-201ENST00000363313 ITPKCQ96DU7 683 aa6.77□□□□□ -1.33
RNU6-238P-201ENST00000363313 ZBTB3Q9H5J0 574 aa6.77□□□□□ -1.33
RNU6-238P-201ENST00000363313 SOS2Q07890 1332 aaPredicted RBP6.76□□□□□ -1.33
RNU6-238P-201ENST00000363313 GSK3AP49840 483 aa6.76□□□□□ -1.33
RNU6-238P-201ENST00000363313 TMEM151AQ8N4L1 468 aa6.76□□□□□ -1.33
RNU6-238P-201ENST00000363313 MEIOBQ8N635 442 aa6.76□□□□□ -1.33
RNU6-238P-201ENST00000363313 NANOS1Q8WY41 292 aaKnown RBP6.76□□□□□ -1.33
RNU6-238P-201ENST00000363313 TSEN34Q9BSV6 310 aaKnown RBP6.76□□□□□ -1.33
RNU6-238P-201ENST00000363313 BMP2P12643 396 aa6.75□□□□□ -1.33
RNU6-238P-201ENST00000363313 HAP1P54257 671 aaPredicted RBP6.75□□□□□ -1.33
RNU6-238P-201ENST00000363313 TTLL12Q14166 644 aaPredicted RBP6.75□□□□□ -1.33
RNU6-238P-201ENST00000363313 TUSC1Q2TAM9 212 aa6.75□□□□□ -1.33
RNU6-238P-201ENST00000363313 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.75□□□□□ -1.33
RNU6-238P-201ENST00000363313 TRMT44Q8IYL2 757 aaKnown RBP6.75□□□□□ -1.33
RNU6-238P-201ENST00000363313 LINC00528Q8N1L1 170 aa6.75□□□□□ -1.33
RNU6-238P-201ENST00000363313 FOXJ1Q92949 421 aa6.75□□□□□ -1.33
RNU6-238P-201ENST00000363313 BEGAINQ9BUH8 593 aa6.75□□□□□ -1.33
RNU6-238P-201ENST00000363313 C1QTNF2Q9BXJ5 285 aa6.75□□□□□ -1.33
RNU6-238P-201ENST00000363313 TBC1D2Q9BYX2 928 aa6.75□□□□□ -1.33
RNU6-238P-201ENST00000363313 ZFAND3Q9H8U3 227 aa6.75□□□□□ -1.33
RNU6-238P-201ENST00000363313 EMILIN1Q9Y6C2 1016 aa6.75□□□□□ -1.33
RNU6-238P-201ENST00000363313 SOBPA7XYQ1 873 aa6.74□□□□□ -1.33
RNU6-238P-201ENST00000363313 HRCP23327 699 aa6.74□□□□□ -1.33
RNU6-238P-201ENST00000363313 ARID5BQ14865 1188 aa6.74□□□□□ -1.33
RNU6-238P-201ENST00000363313 GIGYF2Q6Y7W6 1299 aaKnown RBP6.74□□□□□ -1.33
RNU6-238P-201ENST00000363313 CFAP99D6REC4 459 aa6.73□□□□□ -1.33
RNU6-238P-201ENST00000363313 ZMYND10O75800 440 aa6.73□□□□□ -1.33
RNU6-238P-201ENST00000363313 NR3C2P08235 984 aa6.73□□□□□ -1.33
RNU6-238P-201ENST00000363313 RASSF7Q02833 373 aa6.73□□□□□ -1.33
RNU6-238P-201ENST00000363313 AGERQ15109 404 aa6.73□□□□□ -1.33
RNU6-238P-201ENST00000363313 C6orf118Q5T5N4 469 aa6.73□□□□□ -1.33
RNU6-238P-201ENST00000363313 GPKOWQ92917 476 aaPredicted RBP eCLIP6.73□□□□□ -1.33
RNU6-238P-201ENST00000363313 GDF11O95390 407 aa6.72□□□□□ -1.33
RNU6-238P-201ENST00000363313 NBPF14Q5TI25 921 aa6.72□□□□□ -1.33
RNU6-238P-201ENST00000363313 SH3RF1Q7Z6J0 888 aa6.72□□□□□ -1.33
RNU6-238P-201ENST00000363313 IGHA1P01876 353 aa6.71□□□□□ -1.34
RNU6-238P-201ENST00000363313 C4orf48Q5BLP8 95 aa6.71□□□□□ -1.34
RNU6-238P-201ENST00000363313 KCTD17Q8N5Z5 321 aa6.71□□□□□ -1.34
RNU6-238P-201ENST00000363313 MAP10Q9P2G4 905 aa6.71□□□□□ -1.34
RNU6-238P-201ENST00000363313 DNMT3LQ9UJW3 386 aa6.71□□□□□ -1.34
RNU6-238P-201ENST00000363313 ADAMTS8Q9UP79 889 aa6.71□□□□□ -1.34
RNU6-238P-201ENST00000363313 PCDHB15Q9Y5E8 787 aa6.71□□□□□ -1.34
RNU6-238P-201ENST00000363313 TTLL8A6PVC2 850 aa6.7□□□□□ -1.34
RNU6-238P-201ENST00000363313 RIC3Q7Z5B4 369 aa6.7□□□□□ -1.34
RNU6-238P-201ENST00000363313 FOXK2Q01167 660 aa6.69□□□□□ -1.34
RNU6-238P-201ENST00000363313 SH3BP5LQ7L8J4 393 aa6.69□□□□□ -1.34
RNU6-238P-201ENST00000363313 CCDC116Q8IYX3 515 aa6.69□□□□□ -1.34
RNU6-238P-201ENST00000363313 CDV3Q9UKY7 258 aaKnown RBP6.69□□□□□ -1.34
RNU6-238P-201ENST00000363313 SLURP2P0DP57 97 aa6.68□□□□□ -1.34
RNU6-238P-201ENST00000363313 Q6ZVU0 165 aa6.68□□□□□ -1.34
RNU6-238P-201ENST00000363313 VASH1Q7L8A9 365 aaPredicted RBP6.68□□□□□ -1.34
RNU6-238P-201ENST00000363313 PGPEP1Q9NXJ5 209 aa6.68□□□□□ -1.34
RNU6-238P-201ENST00000363313 SPINT1O43278 529 aa6.67□□□□□ -1.34
RNU6-238P-201ENST00000363313 KRT76Q01546 638 aa6.67□□□□□ -1.34
RNU6-238P-201ENST00000363313 PTSQ03393 145 aa6.67□□□□□ -1.34
RNU6-238P-201ENST00000363313 KANK3Q6NY19 840 aa6.67□□□□□ -1.34
RNU6-238P-201ENST00000363313 GPR161Q8N6U8 529 aaKnown RBP6.67□□□□□ -1.34
RNU6-238P-201ENST00000363313 CNTNAP3BQ96NU0 1288 aa6.67□□□□□ -1.34
RNU6-238P-201ENST00000363313 CNTNAP3Q9BZ76 1288 aa6.67□□□□□ -1.34
RNU6-238P-201ENST00000363313 DNMT3AQ9Y6K1 912 aaPredicted RBP6.67□□□□□ -1.34
RNU6-238P-201ENST00000363313 FSHRP23945 695 aa6.66□□□□□ -1.34
RNU6-238P-201ENST00000363313 COL25A1Q9BXS0 654 aaPredicted RBP6.66□□□□□ -1.34
RNU6-238P-201ENST00000363313 SLC35F4A4IF30 521 aa6.65□□□□□ -1.34
RNU6-238P-201ENST00000363313 PER1O15534 1290 aaPredicted RBP6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms