RNA–Protein interactions for RNA: ENST00000362006.11

CCDC7-203, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-203ENST00000362006 TTC21AQ8NDW8 1320 aa24.38■■□□□ 1.49
CCDC7-203ENST00000362006 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.38■■□□□ 1.49
CCDC7-203ENST00000362006 TTC21BQ7Z4L5 1316 aa24.38■■□□□ 1.49
CCDC7-203ENST00000362006 SSH2Q76I76 1423 aa24.37■■□□□ 1.49
CCDC7-203ENST00000362006 PPP2R1AP30153 589 aa24.37■■□□□ 1.49
CCDC7-203ENST00000362006 GGNBP2Q9H3C7 697 aa24.35■■□□□ 1.49
CCDC7-203ENST00000362006 LTBP4Q8N2S1 1624 aa24.35■■□□□ 1.49
CCDC7-203ENST00000362006 ORAI2Q96SN7 254 aa24.34■■□□□ 1.49
CCDC7-203ENST00000362006 PSME1Q06323 249 aa24.32■■□□□ 1.48
CCDC7-203ENST00000362006 CCDC184Q52MB2 194 aa24.32■■□□□ 1.48
CCDC7-203ENST00000362006 SCAF1Q9H7N4 1312 aaKnown RBP24.31■■□□□ 1.48
CCDC7-203ENST00000362006 NME9Q86XW9 330 aa24.31■■□□□ 1.48
CCDC7-203ENST00000362006 COG3Q96JB2 828 aa24.31■■□□□ 1.48
CCDC7-203ENST00000362006 SLAIN2Q9P270 581 aa24.29■■□□□ 1.48
CCDC7-203ENST00000362006 USP31Q70CQ4 1352 aa24.27■■□□□ 1.48
CCDC7-203ENST00000362006 FOXO3O43524 673 aa24.26■■□□□ 1.47
CCDC7-203ENST00000362006 TNNT2P45379 298 aaPredicted RBP24.26■■□□□ 1.47
CCDC7-203ENST00000362006 OVOS2A0A0J9YW53 1432 aa24.24■■□□□ 1.47
CCDC7-203ENST00000362006 OVOS2Q6IE36 1432 aa24.24■■□□□ 1.47
CCDC7-203ENST00000362006 NPHP3Q7Z494 1330 aa24.24■■□□□ 1.47
CCDC7-203ENST00000362006 PNISRQ8TF01 805 aaKnown RBP24.24■■□□□ 1.47
CCDC7-203ENST00000362006 AATKQ6ZMQ8 1374 aa24.24■■□□□ 1.47
CCDC7-203ENST00000362006 PAK3O75914 559 aaPredicted RBP24.23■■□□□ 1.47
CCDC7-203ENST00000362006 KRT28Q7Z3Y7 464 aa24.23■■□□□ 1.47
CCDC7-203ENST00000362006 USP54Q70EL1 1684 aa24.23■■□□□ 1.47
CCDC7-203ENST00000362006 PIK3C2AO00443 1686 aa24.22■■□□□ 1.47
CCDC7-203ENST00000362006 ABTB2Q8N961 1025 aa24.22■■□□□ 1.47
CCDC7-203ENST00000362006 CFAP53Q96M91 514 aa24.22■■□□□ 1.47
CCDC7-203ENST00000362006 ZRANB1Q9UGI0 708 aa24.22■■□□□ 1.47
CCDC7-203ENST00000362006 BRINP3Q76B58 766 aa24.21■■□□□ 1.47
CCDC7-203ENST00000362006 MTHFSP49914 203 aa24.2■■□□□ 1.47
CCDC7-203ENST00000362006 NLRP6P59044 892 aa24.2■■□□□ 1.46
CCDC7-203ENST00000362006 FAM9BQ8IZU0 186 aa24.2■■□□□ 1.46
CCDC7-203ENST00000362006 TRPM3Q9HCF6 1732 aaPredicted RBP24.2■■□□□ 1.46
CCDC7-203ENST00000362006 SBNO1A3KN83 1393 aa24.18■■□□□ 1.46
CCDC7-203ENST00000362006 MAP2P11137 1827 aaKnown RBP24.18■■□□□ 1.46
CCDC7-203ENST00000362006 YTHDC1Q96MU7 727 aaKnown RBP24.16■■□□□ 1.46
CCDC7-203ENST00000362006 POLKQ9UBT6 870 aa24.15■■□□□ 1.46
CCDC7-203ENST00000362006 INSRP06213 1382 aa24.15■■□□□ 1.46
CCDC7-203ENST00000362006 SMG6Q86US8 1419 aaKnown RBP24.14■■□□□ 1.46
CCDC7-203ENST00000362006 XPCQ01831 940 aaPredicted RBP24.14■■□□□ 1.45
CCDC7-203ENST00000362006 IQSEC2Q5JU85 1478 aa24.14■■□□□ 1.45
CCDC7-203ENST00000362006 PXDNQ92626 1479 aa24.13■■□□□ 1.45
CCDC7-203ENST00000362006 WDR43Q15061 677 aaKnown RBP eCLIP24.13■■□□□ 1.45
CCDC7-203ENST00000362006 MARF1Q9Y4F3 1742 aaKnown RBP24.13■■□□□ 1.45
CCDC7-203ENST00000362006 ALS2Q96Q42 1657 aa24.12■■□□□ 1.45
CCDC7-203ENST00000362006 PNPLA6Q8IY17 1366 aa24.12■■□□□ 1.45
CCDC7-203ENST00000362006 KCNH5Q8NCM2 988 aa24.11■■□□□ 1.45
CCDC7-203ENST00000362006 SOS2Q07890 1332 aaPredicted RBP24.1■■□□□ 1.45
CCDC7-203ENST00000362006 NHSL1Q5SYE7 1610 aa24.1■■□□□ 1.45
CCDC7-203ENST00000362006 TOM1O60784 492 aa24.1■■□□□ 1.45
CCDC7-203ENST00000362006 NUTM2GQ5VZR2 741 aa24.1■■□□□ 1.45
CCDC7-203ENST00000362006 TNS3Q68CZ2 1445 aa24.09■■□□□ 1.45
CCDC7-203ENST00000362006 CDK12Q9NYV4 1490 aaPredicted RBP24.09■■□□□ 1.45
CCDC7-203ENST00000362006 ARHGEF10O15013 1369 aa24.09■■□□□ 1.45
CCDC7-203ENST00000362006 DDX17Q92841 729 aaKnown RBP24.08■■□□□ 1.45
CCDC7-203ENST00000362006 NUDCQ9Y266 331 aa24.08■■□□□ 1.45
CCDC7-203ENST00000362006 SPATA31A3Q5VYP0 1347 aa24.08■■□□□ 1.45
CCDC7-203ENST00000362006 LMOD2Q6P5Q4 547 aa24.08■■□□□ 1.45
CCDC7-203ENST00000362006 KIF24Q5T7B8 1368 aa24.07■■□□□ 1.44
CCDC7-203ENST00000362006 FBLN1P23142 703 aa24.07■■□□□ 1.44
CCDC7-203ENST00000362006 EMILIN1Q9Y6C2 1016 aa24.07■■□□□ 1.44
CCDC7-203ENST00000362006 PPM1GO15355 546 aaPredicted RBP24.06■■□□□ 1.44
CCDC7-203ENST00000362006 RRS1Q15050 365 aaKnown RBP24.06■■□□□ 1.44
CCDC7-203ENST00000362006 COL3A1P02461 1466 aaPredicted RBP24.06■■□□□ 1.44
CCDC7-203ENST00000362006 USP19O94966 1318 aa24.06■■□□□ 1.44
CCDC7-203ENST00000362006 SLIT3O75094 1523 aa24.05■■□□□ 1.44
CCDC7-203ENST00000362006 SHPRHQ149N8 1683 aa24.05■■□□□ 1.44
CCDC7-203ENST00000362006 ROBO1Q9Y6N7 1651 aa24.05■■□□□ 1.44
CCDC7-203ENST00000362006 DIAPH1O60610 1272 aaKnown RBP24.05■■□□□ 1.44
CCDC7-203ENST00000362006 ADAMTS8Q9UP79 889 aa24.05■■□□□ 1.44
CCDC7-203ENST00000362006 SOX12O15370 315 aa24.02■■□□□ 1.44
CCDC7-203ENST00000362006 HNRNPUQ00839 825 aaKnown RBP eCLIP24.02■■□□□ 1.44
CCDC7-203ENST00000362006 MAP3K19Q56UN5 1328 aa24.02■■□□□ 1.44
CCDC7-203ENST00000362006 AHDC1Q5TGY3 1603 aaPredicted RBP24.01■■□□□ 1.43
CCDC7-203ENST00000362006 NFAT5O94916 1531 aa24.01■■□□□ 1.43
CCDC7-203ENST00000362006 FLT4P35916 1363 aa24.01■■□□□ 1.43
CCDC7-203ENST00000362006 GCP02774 474 aa24.01■■□□□ 1.43
CCDC7-203ENST00000362006 BLMP54132 1417 aaPredicted RBP24.01■■□□□ 1.43
CCDC7-203ENST00000362006 AMPHP49418 695 aa24■■□□□ 1.43
CCDC7-203ENST00000362006 CERKQ8TCT0 537 aa24■■□□□ 1.43
CCDC7-203ENST00000362006 RTL1A6NKG5 1358 aa24■■□□□ 1.43
CCDC7-203ENST00000362006 MED1Q15648 1581 aaPredicted RBP23.99■■□□□ 1.43
CCDC7-203ENST00000362006 CENPBP07199 599 aaPredicted RBP23.99■■□□□ 1.43
CCDC7-203ENST00000362006 PEAK1Q9H792 1746 aa23.98■■□□□ 1.43
CCDC7-203ENST00000362006 PHRF1Q9P1Y6 1649 aaKnown RBP23.97■■□□□ 1.43
CCDC7-203ENST00000362006 LTN1O94822 1766 aa23.97■■□□□ 1.43
CCDC7-203ENST00000362006 UBAP1LF5GYI3 381 aa23.96■■□□□ 1.43
CCDC7-203ENST00000362006 U2AF1L5P0DN76 240 aaPredicted RBP23.96■■□□□ 1.43
CCDC7-203ENST00000362006 U2AF1Q01081 240 aaKnown RBP eCLIP23.96■■□□□ 1.43
CCDC7-203ENST00000362006 LRRC59Q96AG4 307 aaKnown RBP23.96■■□□□ 1.43
CCDC7-203ENST00000362006 PNNQ9H307 717 aaKnown RBP23.96■■□□□ 1.43
CCDC7-203ENST00000362006 IL13P35225 146 aa23.96■■□□□ 1.43
CCDC7-203ENST00000362006 U2SURPO15042 1029 aaKnown RBP23.95■■□□□ 1.42
CCDC7-203ENST00000362006 ARHGEF25Q86VW2 580 aa23.95■■□□□ 1.42
CCDC7-203ENST00000362006 HOXC9P31274 260 aa23.94■■□□□ 1.42
CCDC7-203ENST00000362006 IP6K1Q92551 441 aa23.94■■□□□ 1.42
CCDC7-203ENST00000362006 CRYBG1Q9Y4K1 1723 aa23.93■■□□□ 1.42
CCDC7-203ENST00000362006 HSP90AB2PQ58FF8 381 aa23.93■■□□□ 1.42
CCDC7-203ENST00000362006 ZBED9Q6R2W3 1325 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms