RNA–Protein interactions for RNA: ENST00000361675.6

CALD1-201, Transcript of caldesmon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALD1, Length 3,612 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-201ENST00000361675 GTPBP4Q9BZE4 634 aaKnown RBP11.24□□□□□ -0.61
CALD1-201ENST00000361675 WDR7Q9Y4E6 1490 aa11.24□□□□□ -0.61
CALD1-201ENST00000361675 MAGI2Q86UL8 1455 aa11.24□□□□□ -0.61
CALD1-201ENST00000361675 HSP90AB4PQ58FF6 505 aa11.23□□□□□ -0.61
CALD1-201ENST00000361675 BANK1Q8NDB2 785 aa11.23□□□□□ -0.61
CALD1-201ENST00000361675 TRPM1Q7Z4N2 1603 aa11.23□□□□□ -0.61
CALD1-201ENST00000361675 DYNC1I1O14576 645 aa11.23□□□□□ -0.61
CALD1-201ENST00000361675 ZFYVE16Q7Z3T8 1539 aa11.22□□□□□ -0.61
CALD1-201ENST00000361675 ASXL2Q76L83 1435 aa11.22□□□□□ -0.61
CALD1-201ENST00000361675 ERBINQ96RT1 1412 aa11.22□□□□□ -0.61
CALD1-201ENST00000361675 SCAPERQ9BY12 1400 aa11.22□□□□□ -0.61
CALD1-201ENST00000361675 FANCAO15360 1455 aa11.22□□□□□ -0.61
CALD1-201ENST00000361675 CCDC173Q0VFZ6 552 aa11.22□□□□□ -0.61
CALD1-201ENST00000361675 BRD1O95696 1058 aa11.22□□□□□ -0.61
CALD1-201ENST00000361675 TESK2Q96S53 571 aa11.22□□□□□ -0.61
CALD1-201ENST00000361675 TMX4Q9H1E5 349 aaPredicted RBP11.22□□□□□ -0.61
CALD1-201ENST00000361675 TAF3Q5VWG9 929 aa11.21□□□□□ -0.61
CALD1-201ENST00000361675 DISP3Q9P2K9 1392 aa11.21□□□□□ -0.61
CALD1-201ENST00000361675 FSD2A1L4K1 749 aa11.21□□□□□ -0.61
CALD1-201ENST00000361675 FOSBP53539 338 aa11.21□□□□□ -0.61
CALD1-201ENST00000361675 PPP1R1BQ9UD71 204 aaPredicted RBP11.21□□□□□ -0.61
CALD1-201ENST00000361675 E9PCH4 1651 aa11.21□□□□□ -0.62
CALD1-201ENST00000361675 DDX11L8A8MPP1 907 aa11.21□□□□□ -0.62
CALD1-201ENST00000361675 CDCA7LQ96GN5 454 aa11.21□□□□□ -0.62
CALD1-201ENST00000361675 C8orf34Q49A92 452 aa11.2□□□□□ -0.62
CALD1-201ENST00000361675 KIF3BO15066 747 aa11.2□□□□□ -0.62
CALD1-201ENST00000361675 KTN1Q86UP2 1357 aaKnown RBP11.2□□□□□ -0.62
CALD1-201ENST00000361675 SMARCA5O60264 1052 aaPredicted RBP11.2□□□□□ -0.62
CALD1-201ENST00000361675 TMX1Q9H3N1 280 aa11.2□□□□□ -0.62
CALD1-201ENST00000361675 SH3BP1Q9Y3L3 701 aa11.2□□□□□ -0.62
CALD1-201ENST00000361675 GOLGA6L22H0YM25 854 aa11.19□□□□□ -0.62
CALD1-201ENST00000361675 TNNT1P13805 278 aa11.19□□□□□ -0.62
CALD1-201ENST00000361675 RBM26Q5T8P6 1007 aaKnown RBP11.19□□□□□ -0.62
CALD1-201ENST00000361675 EP400NLQ6ZTU2 488 aa11.19□□□□□ -0.62
CALD1-201ENST00000361675 ATP10AO60312 1499 aa11.19□□□□□ -0.62
CALD1-201ENST00000361675 CREBRFQ8IUR6 639 aa11.19□□□□□ -0.62
CALD1-201ENST00000361675 CHMP5Q9NZZ3 219 aa11.19□□□□□ -0.62
CALD1-201ENST00000361675 DDX49Q9Y6V7 483 aaKnown RBP11.19□□□□□ -0.62
CALD1-201ENST00000361675 UGGT1Q9NYU2 1555 aa11.19□□□□□ -0.62
CALD1-201ENST00000361675 MAFGO15525 162 aa11.18□□□□□ -0.62
CALD1-201ENST00000361675 NEUROD2Q15784 382 aa11.18□□□□□ -0.62
CALD1-201ENST00000361675 TMCO4Q5TGY1 634 aa11.18□□□□□ -0.62
CALD1-201ENST00000361675 GAS2L3Q86XJ1 694 aa11.18□□□□□ -0.62
CALD1-201ENST00000361675 STK24Q9Y6E0 443 aa11.18□□□□□ -0.62
CALD1-201ENST00000361675 ABCA9Q8IUA7 1624 aa11.18□□□□□ -0.62
CALD1-201ENST00000361675 CSPP1Q1MSJ5 1256 aa11.18□□□□□ -0.62
CALD1-201ENST00000361675 SASS6Q6UVJ0 657 aa11.18□□□□□ -0.62
CALD1-201ENST00000361675 CENPQQ7L2Z9 268 aaPredicted RBP11.18□□□□□ -0.62
CALD1-201ENST00000361675 IRX5P78411 483 aaPredicted RBP11.18□□□□□ -0.62
CALD1-201ENST00000361675 C20orf194Q5TEA3 1177 aa11.18□□□□□ -0.62
CALD1-201ENST00000361675 PNISRQ8TF01 805 aaKnown RBP11.18□□□□□ -0.62
CALD1-201ENST00000361675 ADGRL1O94910 1474 aa11.18□□□□□ -0.62
CALD1-201ENST00000361675 PER1O15534 1290 aaPredicted RBP11.17□□□□□ -0.62
CALD1-201ENST00000361675 HSCBQ8IWL3 235 aa11.17□□□□□ -0.62
CALD1-201ENST00000361675 OSCARQ8IYS5 282 aa11.17□□□□□ -0.62
CALD1-201ENST00000361675 HSP90AB1P08238 724 aaKnown RBP11.17□□□□□ -0.62
CALD1-201ENST00000361675 PDCL2Q8N4E4 241 aa11.17□□□□□ -0.62
CALD1-201ENST00000361675 MFAP1P55081 439 aaKnown RBP11.17□□□□□ -0.62
CALD1-201ENST00000361675 RALBP1Q15311 655 aa11.17□□□□□ -0.62
CALD1-201ENST00000361675 PANK3Q9H999 370 aa11.17□□□□□ -0.62
CALD1-201ENST00000361675 GPRASP1Q5JY77 1395 aa11.17□□□□□ -0.62
CALD1-201ENST00000361675 ATP7AQ04656 1500 aa11.17□□□□□ -0.62
CALD1-201ENST00000361675 GBP4Q96PP9 640 aa11.16□□□□□ -0.62
CALD1-201ENST00000361675 CCDC66A2RUB6 948 aa11.16□□□□□ -0.62
CALD1-201ENST00000361675 SEC24BO95487 1268 aa11.16□□□□□ -0.62
CALD1-201ENST00000361675 TBC1D2Q9BYX2 928 aa11.16□□□□□ -0.62
CALD1-201ENST00000361675 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.16□□□□□ -0.62
CALD1-201ENST00000361675 RNF214Q8ND24 703 aa11.16□□□□□ -0.62
CALD1-201ENST00000361675 RTEL1-TNFRSF6BF6WH68 1400 aa11.16□□□□□ -0.62
CALD1-201ENST00000361675 SPINK5Q9NQ38 1064 aaPredicted RBP11.15□□□□□ -0.62
CALD1-201ENST00000361675 INO80Q9ULG1 1556 aaPredicted RBP11.15□□□□□ -0.62
CALD1-201ENST00000361675 CLTCL1P53675 1640 aa11.15□□□□□ -0.62
CALD1-201ENST00000361675 MROH1Q8NDA8 1641 aa11.15□□□□□ -0.63
CALD1-201ENST00000361675 U2AF2P26368 475 aaKnown RBP eCLIP11.15□□□□□ -0.638e-8■□□□□ 10.4
CALD1-201ENST00000361675 LMOD3Q0VAK6 560 aa11.15□□□□□ -0.63
CALD1-201ENST00000361675 ATP2B3Q16720 1220 aa11.15□□□□□ -0.63
CALD1-201ENST00000361675 CASC1Q6TDU7 716 aa11.15□□□□□ -0.63
CALD1-201ENST00000361675 PRDM15P57071 1507 aaPredicted RBP11.15□□□□□ -0.63
CALD1-201ENST00000361675 SGSM3Q96HU1 749 aa11.14□□□□□ -0.63
CALD1-201ENST00000361675 ARAP3Q8WWN8 1544 aa11.14□□□□□ -0.63
CALD1-201ENST00000361675 SSR1P43307 286 aaKnown RBP11.14□□□□□ -0.63
CALD1-201ENST00000361675 TOMM22Q9NS69 142 aa11.14□□□□□ -0.63
CALD1-201ENST00000361675 TIGD1Q96MW7 591 aa11.13□□□□□ -0.63
CALD1-201ENST00000361675 PTPRTO14522 1441 aa11.13□□□□□ -0.63
CALD1-201ENST00000361675 ZNF500O60304 480 aaPredicted RBP11.13□□□□□ -0.63
CALD1-201ENST00000361675 PEX14O75381 377 aa11.13□□□□□ -0.63
CALD1-201ENST00000361675 KIAA2012Q0VF49 1180 aa11.13□□□□□ -0.63
CALD1-201ENST00000361675 DEPDC5O75140 1603 aa11.13□□□□□ -0.63
CALD1-201ENST00000361675 KIDINS220Q9ULH0 1771 aa11.13□□□□□ -0.63
CALD1-201ENST00000361675 CHAF1AQ13111 956 aaPredicted RBP11.13□□□□□ -0.63
CALD1-201ENST00000361675 STK26Q9P289 416 aa11.13□□□□□ -0.63
CALD1-201ENST00000361675 RAPGEF3O95398 923 aa11.12□□□□□ -0.63
CALD1-201ENST00000361675 EXOC8Q8IYI6 725 aa11.12□□□□□ -0.63
CALD1-201ENST00000361675 COL17A1Q9UMD9 1497 aaPredicted RBP11.12□□□□□ -0.63
CALD1-201ENST00000361675 LOC102724159A0A0B4J2E5 919 aa11.11□□□□□ -0.63
CALD1-201ENST00000361675 PWP2Q15269 919 aaKnown RBP11.11□□□□□ -0.63
CALD1-201ENST00000361675 HSP90AB3PQ58FF7 597 aa11.11□□□□□ -0.63
CALD1-201ENST00000361675 MADDQ8WXG6 1647 aa11.11□□□□□ -0.63
CALD1-201ENST00000361675 TRPM2O94759 1503 aa11.11□□□□□ -0.63
CALD1-201ENST00000361675 ADGRF5Q8IZF2 1346 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms