RNA–Protein interactions for RNA: ENST00000361391.10

CTNND1-203, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-203ENST00000361391 RBM42Q9BTD8 480 aaKnown RBP9.68□□□□□ -0.86
CTNND1-203ENST00000361391 NLRP6P59044 892 aa9.68□□□□□ -0.86
CTNND1-203ENST00000361391 ODF2Q5BJF6 829 aa9.68□□□□□ -0.86
CTNND1-203ENST00000361391 IL27Q8NEV9 243 aa9.68□□□□□ -0.86
CTNND1-203ENST00000361391 TCP11L2Q8N4U5 519 aa9.68□□□□□ -0.86
CTNND1-203ENST00000361391 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.67□□□□□ -0.86
CTNND1-203ENST00000361391 PRKAR2BP31323 418 aa9.67□□□□□ -0.86
CTNND1-203ENST00000361391 HSP90AB4PQ58FF6 505 aa9.67□□□□□ -0.86
CTNND1-203ENST00000361391 TSPY26PQ9H489 355 aa9.67□□□□□ -0.86
CTNND1-203ENST00000361391 BRMS1Q9HCU9 246 aa9.67□□□□□ -0.86
CTNND1-203ENST00000361391 SPINK5Q9NQ38 1064 aaPredicted RBP9.67□□□□□ -0.86
CTNND1-203ENST00000361391 ARGLU1Q9NWB6 273 aaPredicted RBP9.66□□□□□ -0.86
CTNND1-203ENST00000361391 OFD1O75665 1012 aa9.66□□□□□ -0.86
CTNND1-203ENST00000361391 ATF3P18847 181 aa9.66□□□□□ -0.86
CTNND1-203ENST00000361391 CALRP27797 417 aaKnown RBP9.66□□□□□ -0.86
CTNND1-203ENST00000361391 STRN4Q9NRL3 753 aa9.66□□□□□ -0.86
CTNND1-203ENST00000361391 NAT10Q9H0A0 1025 aaKnown RBP9.66□□□□□ -0.86
CTNND1-203ENST00000361391 ABTB2Q8N961 1025 aa9.66□□□□□ -0.86
CTNND1-203ENST00000361391 PSMA5P28066 241 aa9.65□□□□□ -0.86
CTNND1-203ENST00000361391 PPP2R1AP30153 589 aa9.65□□□□□ -0.86
CTNND1-203ENST00000361391 CFAP70Q5T0N1 1121 aa9.65□□□□□ -0.86
CTNND1-203ENST00000361391 SPDYE4A6NLX3 237 aa9.65□□□□□ -0.86
CTNND1-203ENST00000361391 ATP2B2Q01814 1243 aa9.65□□□□□ -0.86
CTNND1-203ENST00000361391 TTC39AQ5SRH9 613 aa9.65□□□□□ -0.86
CTNND1-203ENST00000361391 MRE11P49959 708 aa9.65□□□□□ -0.86
CTNND1-203ENST00000361391 FAM69CQ0P6D2 419 aa9.65□□□□□ -0.87
CTNND1-203ENST00000361391 ESCO1Q5FWF5 840 aa9.65□□□□□ -0.87
CTNND1-203ENST00000361391 RAD54L2Q9Y4B4 1467 aa9.65□□□□□ -0.87
CTNND1-203ENST00000361391 GRM1Q13255 1194 aa9.64□□□□□ -0.87
CTNND1-203ENST00000361391 TMEM132AQ24JP5 1023 aa9.64□□□□□ -0.87
CTNND1-203ENST00000361391 MYL6BP14649 208 aa9.64□□□□□ -0.87
CTNND1-203ENST00000361391 TWISTNBQ3B726 338 aaPredicted RBP9.64□□□□□ -0.87
CTNND1-203ENST00000361391 HSP90B2PQ58FF3 399 aa9.64□□□□□ -0.87
CTNND1-203ENST00000361391 CCDC30Q5VVM6 783 aa9.64□□□□□ -0.87
CTNND1-203ENST00000361391 FAM177A1Q8N128 213 aaPredicted RBP9.64□□□□□ -0.87
CTNND1-203ENST00000361391 CLASRPQ8N2M8 674 aaKnown RBP9.64□□□□□ -0.87
CTNND1-203ENST00000361391 FGD6Q6ZV73 1430 aa9.64□□□□□ -0.87
CTNND1-203ENST00000361391 FGD5Q6ZNL6 1462 aa9.64□□□□□ -0.87
CTNND1-203ENST00000361391 NBPF1Q3BBV0 1214 aa9.63□□□□□ -0.87
CTNND1-203ENST00000361391 KINO60870 393 aaKnown RBP9.63□□□□□ -0.87
CTNND1-203ENST00000361391 MYCNP04198 464 aaPredicted RBP9.63□□□□□ -0.87
CTNND1-203ENST00000361391 SLC4A2P04920 1241 aa9.63□□□□□ -0.87
CTNND1-203ENST00000361391 MIA2Q96PC5 1412 aa9.63□□□□□ -0.87
CTNND1-203ENST00000361391 CNNM1Q9NRU3 951 aa9.63□□□□□ -0.87
CTNND1-203ENST00000361391 XBP1P17861 261 aa9.63□□□□□ -0.87
CTNND1-203ENST00000361391 KIF6Q6ZMV9 814 aa9.63□□□□□ -0.87
CTNND1-203ENST00000361391 PIBF1Q8WXW3 757 aa9.63□□□□□ -0.87
CTNND1-203ENST00000361391 CDK5RAP3Q96JB5 506 aa9.63□□□□□ -0.87
CTNND1-203ENST00000361391 MAP7D2Q96T17 732 aa9.63□□□□□ -0.87
CTNND1-203ENST00000361391 PRAM1Q96QH2 718 aa9.62□□□□□ -0.87
CTNND1-203ENST00000361391 TBC1D2BQ9UPU7 963 aa9.62□□□□□ -0.87
CTNND1-203ENST00000361391 TXNDC2Q86VQ3 553 aa9.62□□□□□ -0.87
CTNND1-203ENST00000361391 MYOM3Q5VTT5 1437 aa9.62□□□□□ -0.87
CTNND1-203ENST00000361391 ZHX3Q9H4I2 956 aa9.62□□□□□ -0.87
CTNND1-203ENST00000361391 KIF21BO75037 1637 aa9.62□□□□□ -0.87
CTNND1-203ENST00000361391 STK38Q15208 465 aa9.62□□□□□ -0.87
CTNND1-203ENST00000361391 PLCD3Q8N3E9 789 aa9.62□□□□□ -0.87
CTNND1-203ENST00000361391 ACBD3Q9H3P7 528 aa9.62□□□□□ -0.87
CTNND1-203ENST00000361391 KRT18P05783 430 aaKnown RBP9.61□□□□□ -0.87
CTNND1-203ENST00000361391 SKAP1Q86WV1 359 aa9.61□□□□□ -0.87
CTNND1-203ENST00000361391 GNAI2P04899 355 aa9.61□□□□□ -0.87
CTNND1-203ENST00000361391 NUP133Q8WUM0 1156 aa9.61□□□□□ -0.87
CTNND1-203ENST00000361391 MAGEC2Q9UBF1 373 aaPredicted RBP9.61□□□□□ -0.87
CTNND1-203ENST00000361391 ARHGAP5Q13017 1502 aa9.61□□□□□ -0.87
CTNND1-203ENST00000361391 SERPINC1P01008 464 aa9.61□□□□□ -0.87
CTNND1-203ENST00000361391 SART3Q15020 963 aaKnown RBP9.61□□□□□ -0.87
CTNND1-203ENST00000361391 BRD4O60885 1362 aaPredicted RBP9.61□□□□□ -0.87
CTNND1-203ENST00000361391 H0YHG0 523 aa9.61□□□□□ -0.87
CTNND1-203ENST00000361391 DDX54Q8TDD1 881 aaKnown RBP9.61□□□□□ -0.87
CTNND1-203ENST00000361391 SULT6B1Q6IMI4 303 aa9.6□□□□□ -0.87
CTNND1-203ENST00000361391 CCDC85AQ96PX6 553 aaPredicted RBP9.6□□□□□ -0.87
CTNND1-203ENST00000361391 PLCD4Q9BRC7 762 aa9.6□□□□□ -0.87
CTNND1-203ENST00000361391 SLC12A5Q9H2X9 1139 aa9.6□□□□□ -0.87
CTNND1-203ENST00000361391 AXDND1Q5T1B0 1012 aaPredicted RBP9.6□□□□□ -0.87
CTNND1-203ENST00000361391 GNAI3P08754 354 aa9.6□□□□□ -0.87
CTNND1-203ENST00000361391 CDR1P51861 262 aa9.6□□□□□ -0.87
CTNND1-203ENST00000361391 CCDC184Q52MB2 194 aa9.59□□□□□ -0.87
CTNND1-203ENST00000361391 NOM1Q5C9Z4 860 aaKnown RBP9.59□□□□□ -0.87
CTNND1-203ENST00000361391 ANKRD50Q9ULJ7 1429 aa9.59□□□□□ -0.87
CTNND1-203ENST00000361391 FKBP4Q02790 459 aaKnown RBP eCLIP9.59□□□□□ -0.87
CTNND1-203ENST00000361391 RRS1Q15050 365 aaKnown RBP9.59□□□□□ -0.87
CTNND1-203ENST00000361391 AFAP1Q8N556 730 aa9.59□□□□□ -0.87
CTNND1-203ENST00000361391 ME1P48163 572 aa9.59□□□□□ -0.87
CTNND1-203ENST00000361391 FAM193AP78312 1265 aa9.59□□□□□ -0.87
CTNND1-203ENST00000361391 CCDC173Q0VFZ6 552 aa9.59□□□□□ -0.87
CTNND1-203ENST00000361391 HDGFL1Q5TGJ6 251 aa9.59□□□□□ -0.87
CTNND1-203ENST00000361391 TANGO6Q9C0B7 1094 aa9.59□□□□□ -0.87
CTNND1-203ENST00000361391 TNMDQ9H2S6 317 aa9.59□□□□□ -0.87
CTNND1-203ENST00000361391 XPCQ01831 940 aaPredicted RBP9.59□□□□□ -0.87
CTNND1-203ENST00000361391 CCDC158Q5M9N0 1113 aa9.59□□□□□ -0.87
CTNND1-203ENST00000361391 CWC27Q6UX04 472 aaKnown RBP9.59□□□□□ -0.87
CTNND1-203ENST00000361391 IL1RAPL2Q9NP60 686 aa9.59□□□□□ -0.87
CTNND1-203ENST00000361391 GAPVD1Q14C86 1478 aa9.58□□□□□ -0.88
CTNND1-203ENST00000361391 LETM1O95202 739 aaPredicted RBP9.58□□□□□ -0.88
CTNND1-203ENST00000361391 LRRCC1Q9C099 1032 aa9.58□□□□□ -0.88
CTNND1-203ENST00000361391 MIS18AQ9NYP9 233 aa9.58□□□□□ -0.88
CTNND1-203ENST00000361391 CUX1P39880 1505 aa9.58□□□□□ -0.88
CTNND1-203ENST00000361391 C11orf95C9JLR9 678 aaPredicted RBP9.58□□□□□ -0.88
CTNND1-203ENST00000361391 FILIP1LQ4L180 1135 aa9.58□□□□□ -0.88
CTNND1-203ENST00000361391 GAS2L2Q8NHY3 880 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms