RNA–Protein interactions for RNA: ENST00000361115.4

CCL28-201, Transcript of C-C motif chemokine ligand 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL28, Length 3,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-201ENST00000361115 SPATA31A3Q5VYP0 1347 aa10.78□□□□□ -0.68
CCL28-201ENST00000361115 ROBO2Q9HCK4 1378 aa10.78□□□□□ -0.68
CCL28-201ENST00000361115 KIAA1210Q9ULL0 1709 aa10.78□□□□□ -0.68
CCL28-201ENST00000361115 HAP1P54257 671 aaPredicted RBP10.77□□□□□ -0.69
CCL28-201ENST00000361115 BAG6P46379 1132 aa10.77□□□□□ -0.69
CCL28-201ENST00000361115 SPATA31E1Q6ZUB1 1445 aa10.77□□□□□ -0.69
CCL28-201ENST00000361115 NINLQ9Y2I6 1382 aa10.76□□□□□ -0.69
CCL28-201ENST00000361115 TULP4Q9NRJ4 1543 aa10.76□□□□□ -0.69
CCL28-201ENST00000361115 CHGAP10645 457 aaKnown RBP10.75□□□□□ -0.69
CCL28-201ENST00000361115 PARP4Q9UKK3 1724 aaKnown RBP10.74□□□□□ -0.69
CCL28-201ENST00000361115 ZNF326Q5BKZ1 582 aaKnown RBP10.74□□□□□ -0.69
CCL28-201ENST00000361115 CHIC2Q9UKJ5 165 aa10.74□□□□□ -0.69
CCL28-201ENST00000361115 BCL9O00512 1426 aa10.74□□□□□ -0.69
CCL28-201ENST00000361115 FAM50AQ14320 339 aaKnown RBP10.73□□□□□ -0.69
CCL28-201ENST00000361115 PHRF1Q9P1Y6 1649 aaKnown RBP10.73□□□□□ -0.69
CCL28-201ENST00000361115 YTHDC2Q9H6S0 1430 aaKnown RBP10.73□□□□□ -0.69
CCL28-201ENST00000361115 TOPAZ1Q8N9V7 1692 aa10.73□□□□□ -0.69
CCL28-201ENST00000361115 NUP188Q5SRE5 1749 aa10.72□□□□□ -0.69
CCL28-201ENST00000361115 PLCB2Q00722 1185 aa10.72□□□□□ -0.69
CCL28-201ENST00000361115 NEFLP07196 543 aa10.71□□□□□ -0.69
CCL28-201ENST00000361115 WNK3Q9BYP7 1800 aa10.71□□□□□ -0.69
CCL28-201ENST00000361115 HMGB2P26583 209 aaKnown RBP10.71□□□□□ -0.69
CCL28-201ENST00000361115 QSER1Q2KHR3 1735 aa10.7□□□□□ -0.7
CCL28-201ENST00000361115 KRT27Q7Z3Y8 459 aa10.69□□□□□ -0.7
CCL28-201ENST00000361115 DCAF8L1A6NGE4 600 aa10.68□□□□□ -0.7
CCL28-201ENST00000361115 PODXL2Q9NZ53 605 aa10.68□□□□□ -0.7
CCL28-201ENST00000361115 THRAP3Q9Y2W1 955 aaKnown RBP10.68□□□□□ -0.7
CCL28-201ENST00000361115 FANCIQ9NVI1 1328 aa10.68□□□□□ -0.7
CCL28-201ENST00000361115 TRPM1Q7Z4N2 1603 aa10.68□□□□□ -0.7
CCL28-201ENST00000361115 USP54Q70EL1 1684 aa10.67□□□□□ -0.7
CCL28-201ENST00000361115 DDX10Q13206 875 aaKnown RBP10.67□□□□□ -0.7
CCL28-201ENST00000361115 GPRASP1Q5JY77 1395 aa10.67□□□□□ -0.7
CCL28-201ENST00000361115 LMO7Q8WWI1 1683 aa10.66□□□□□ -0.7
CCL28-201ENST00000361115 COL24A1Q17RW2 1714 aa10.66□□□□□ -0.7
CCL28-201ENST00000361115 CASZ1Q86V15 1759 aa10.66□□□□□ -0.7
CCL28-201ENST00000361115 ADGRB1O14514 1584 aa10.66□□□□□ -0.7
CCL28-201ENST00000361115 CPDO75976 1380 aa10.66□□□□□ -0.7
CCL28-201ENST00000361115 BARGINQ6ZT62 677 aa10.66□□□□□ -0.7
CCL28-201ENST00000361115 AATKQ6ZMQ8 1374 aa10.65□□□□□ -0.7
CCL28-201ENST00000361115 RBM33Q96EV2 1170 aaKnown RBP10.65□□□□□ -0.7
CCL28-201ENST00000361115 C14orf93Q9H972 538 aaKnown RBP10.65□□□□□ -0.7
CCL28-201ENST00000361115 PHF8Q9UPP1 1060 aa10.64□□□□□ -0.71
CCL28-201ENST00000361115 PEAK1Q9H792 1746 aa10.64□□□□□ -0.71
CCL28-201ENST00000361115 ADAMTS2O95450 1211 aa10.64□□□□□ -0.71
CCL28-201ENST00000361115 ESCO1Q5FWF5 840 aa10.64□□□□□ -0.71
CCL28-201ENST00000361115 FAM196AQ6ZSG2 479 aa10.64□□□□□ -0.71
CCL28-201ENST00000361115 KRT28Q7Z3Y7 464 aa10.64□□□□□ -0.71
CCL28-201ENST00000361115 SEPT12Q8IYM1 358 aa10.64□□□□□ -0.71
CCL28-201ENST00000361115 SPATA31A5Q5VU36 1347 aa10.64□□□□□ -0.71
CCL28-201ENST00000361115 SPATA31A7Q8IWB4 1347 aa10.64□□□□□ -0.71
CCL28-201ENST00000361115 MAP3K5Q99683 1374 aa10.64□□□□□ -0.71
CCL28-201ENST00000361115 CAMTA1Q9Y6Y1 1673 aa10.64□□□□□ -0.71
CCL28-201ENST00000361115 DEKP35659 375 aaKnown RBP10.64□□□□□ -0.71
CCL28-201ENST00000361115 ORAI2Q96SN7 254 aa10.63□□□□□ -0.71
CCL28-201ENST00000361115 NRKQ7Z2Y5 1582 aa10.63□□□□□ -0.71
CCL28-201ENST00000361115 QRICH2Q9H0J4 1663 aa10.63□□□□□ -0.71
CCL28-201ENST00000361115 CDCA7Q9BWT1 371 aaPredicted RBP10.62□□□□□ -0.71
CCL28-201ENST00000361115 ARHGEF28Q8N1W1 1705 aaKnown RBP10.62□□□□□ -0.71
CCL28-201ENST00000361115 UBE2Q2Q8WVN8 375 aa10.62□□□□□ -0.71
CCL28-201ENST00000361115 NBPF8Q3BBV2 869 aa10.62□□□□□ -0.71
CCL28-201ENST00000361115 NBPF14Q5TI25 921 aa10.62□□□□□ -0.71
CCL28-201ENST00000361115 RGPD8O14715 1765 aaPredicted RBP10.62□□□□□ -0.71
CCL28-201ENST00000361115 POLR3AO14802 1390 aaPredicted RBP10.61□□□□□ -0.71
CCL28-201ENST00000361115 SLIT3O75094 1523 aa10.6□□□□□ -0.71
CCL28-201ENST00000361115 KLHL34Q8N239 644 aa10.6□□□□□ -0.71
CCL28-201ENST00000361115 ANO8Q9HCE9 1232 aaPredicted RBP10.59□□□□□ -0.71
CCL28-201ENST00000361115 IRX6P78412 446 aaPredicted RBP10.59□□□□□ -0.71
CCL28-201ENST00000361115 FAM208AQ9UK61 1670 aaKnown RBP10.59□□□□□ -0.71
CCL28-201ENST00000361115 AKAP12Q02952 1782 aa10.58□□□□□ -0.72
CCL28-201ENST00000361115 HIRIP3Q9BW71 556 aaPredicted RBP10.57□□□□□ -0.72
CCL28-201ENST00000361115 SPATA31A1Q5TZJ5 1347 aa10.57□□□□□ -0.72
CCL28-201ENST00000361115 SBF2Q86WG5 1849 aa10.56□□□□□ -0.72
CCL28-201ENST00000361115 CCER2I3L3R5 266 aa10.56□□□□□ -0.72
CCL28-201ENST00000361115 USP19O94966 1318 aa10.56□□□□□ -0.72
CCL28-201ENST00000361115 LRRC37A3O60309 1634 aa10.56□□□□□ -0.72
CCL28-201ENST00000361115 OVOS2A0A0G2JMS6 1433 aa10.56□□□□□ -0.72
CCL28-201ENST00000361115 OVOS2A0A0J9YW53 1432 aa10.56□□□□□ -0.72
CCL28-201ENST00000361115 OVOS2Q6IE36 1432 aa10.56□□□□□ -0.72
CCL28-201ENST00000361115 SSH2Q76I76 1423 aa10.56□□□□□ -0.72
CCL28-201ENST00000361115 NHSQ6T4R5 1651 aa10.56□□□□□ -0.72
CCL28-201ENST00000361115 CAMKK2Q96RR4 588 aa10.56□□□□□ -0.72
CCL28-201ENST00000361115 PLSCR1O15162 318 aa10.54□□□□□ -0.72
CCL28-201ENST00000361115 ARXQ96QS3 562 aa10.54□□□□□ -0.72
CCL28-201ENST00000361115 FOXO3O43524 673 aa10.53□□□□□ -0.72
CCL28-201ENST00000361115 RAB3GAP2Q9H2M9 1393 aa10.53□□□□□ -0.72
CCL28-201ENST00000361115 SIN3AQ96ST3 1273 aa10.53□□□□□ -0.72
CCL28-201ENST00000361115 CHD4Q14839 1912 aa10.53□□□□□ -0.72
CCL28-201ENST00000361115 ANP32CO43423 234 aa10.53□□□□□ -0.72
CCL28-201ENST00000361115 ADGRF5Q8IZF2 1346 aa10.53□□□□□ -0.72
CCL28-201ENST00000361115 PAPPAQ13219 1627 aa10.52□□□□□ -0.73
CCL28-201ENST00000361115 SPON1Q9HCB6 807 aa10.52□□□□□ -0.73
CCL28-201ENST00000361115 PLEKHG3A1L390 1219 aa10.51□□□□□ -0.73
CCL28-201ENST00000361115 CRB1P82279 1406 aa10.51□□□□□ -0.73
CCL28-201ENST00000361115 DDX17Q92841 729 aaKnown RBP10.51□□□□□ -0.73
CCL28-201ENST00000361115 PLEKHH1Q9ULM0 1364 aa10.5□□□□□ -0.73
CCL28-201ENST00000361115 KCNQ2O43526 872 aa10.5□□□□□ -0.73
CCL28-201ENST00000361115 KDM2AQ9Y2K7 1162 aa10.5□□□□□ -0.73
CCL28-201ENST00000361115 COL18A1P39060 1754 aa10.5□□□□□ -0.73
CCL28-201ENST00000361115 WASLO00401 505 aaPredicted RBP10.5□□□□□ -0.73
CCL28-201ENST00000361115 NBR1Q14596 966 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms