RNA–Protein interactions for RNA: ENST00000360982.2

NCKAP1-201, Transcript of NCK associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene NCKAP1, Length 4,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-201ENST00000360982 LNPKQ9C0E8 428 aa24.89■■□□□ 1.58
NCKAP1-201ENST00000360982 CCDC61Q9Y6R9 512 aa24.89■■□□□ 1.58
NCKAP1-201ENST00000360982 CCDC27Q2M243 656 aa24.89■■□□□ 1.57
NCKAP1-201ENST00000360982 LAMC3Q9Y6N6 1575 aa24.89■■□□□ 1.57
NCKAP1-201ENST00000360982 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.88■■□□□ 1.57
NCKAP1-201ENST00000360982 HDGFL1Q5TGJ6 251 aa24.88■■□□□ 1.57
NCKAP1-201ENST00000360982 TWISTNBQ3B726 338 aaPredicted RBP24.87■■□□□ 1.57
NCKAP1-201ENST00000360982 SURF6O75683 361 aaKnown RBP24.87■■□□□ 1.57
NCKAP1-201ENST00000360982 DDX54Q8TDD1 881 aaKnown RBP24.87■■□□□ 1.57
NCKAP1-201ENST00000360982 HOOK1Q9UJC3 728 aaKnown RBP24.86■■□□□ 1.57
NCKAP1-201ENST00000360982 ABCA10Q8WWZ4 1543 aa24.86■■□□□ 1.57
NCKAP1-201ENST00000360982 CCDC43Q96MW1 224 aaKnown RBP24.86■■□□□ 1.57
NCKAP1-201ENST00000360982 DAPK1P53355 1430 aa24.85■■□□□ 1.57
NCKAP1-201ENST00000360982 NINLQ9Y2I6 1382 aa24.85■■□□□ 1.57
NCKAP1-201ENST00000360982 FAM177BA6PVY3 158 aa24.85■■□□□ 1.57
NCKAP1-201ENST00000360982 ERC1Q8IUD2 1116 aa24.85■■□□□ 1.57
NCKAP1-201ENST00000360982 KCNH5Q8NCM2 988 aa24.84■■□□□ 1.57
NCKAP1-201ENST00000360982 ANKRD20A12PQ8NF67 263 aa24.84■■□□□ 1.57
NCKAP1-201ENST00000360982 UBE2Q2Q8WVN8 375 aa24.83■■□□□ 1.57
NCKAP1-201ENST00000360982 GNL3LQ9NVN8 582 aaKnown RBP24.83■■□□□ 1.56
NCKAP1-201ENST00000360982 CNTROBQ8N137 903 aa24.82■■□□□ 1.56
NCKAP1-201ENST00000360982 MAP7D2Q96T17 732 aa24.82■■□□□ 1.56
NCKAP1-201ENST00000360982 CHMP5Q9NZZ3 219 aa24.82■■□□□ 1.56
NCKAP1-201ENST00000360982 FSD1Q9BTV5 496 aa24.82■■□□□ 1.56
NCKAP1-201ENST00000360982 SMC3Q9UQE7 1217 aa24.82■■□□□ 1.56
NCKAP1-201ENST00000360982 MRE11P49959 708 aa24.81■■□□□ 1.56
NCKAP1-201ENST00000360982 EXOSC9Q06265 439 aaKnown RBP24.81■■□□□ 1.56
NCKAP1-201ENST00000360982 SART3Q15020 963 aaKnown RBP24.81■■□□□ 1.56
NCKAP1-201ENST00000360982 PANK1Q8TE04 598 aa24.81■■□□□ 1.56
NCKAP1-201ENST00000360982 EPRSP07814 1512 aaKnown RBP24.81■■□□□ 1.56
NCKAP1-201ENST00000360982 ZNF771Q7L3S4 317 aaPredicted RBP24.81■■□□□ 1.56
NCKAP1-201ENST00000360982 CCDC141Q6ZP82 1450 aa24.8■■□□□ 1.56
NCKAP1-201ENST00000360982 MAGI1Q96QZ7 1491 aaPredicted RBP24.8■■□□□ 1.56
NCKAP1-201ENST00000360982 XBP1P17861 261 aa24.8■■□□□ 1.56
NCKAP1-201ENST00000360982 HIP1O00291 1037 aa24.79■■□□□ 1.56
NCKAP1-201ENST00000360982 PIP4K2BP78356 416 aa24.79■■□□□ 1.56
NCKAP1-201ENST00000360982 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.79■■□□□ 1.568e-8■■□□□ 11.8
NCKAP1-201ENST00000360982 CDC45O75419 566 aa24.79■■□□□ 1.56
NCKAP1-201ENST00000360982 CT47B1P0C2W7 299 aaPredicted RBP24.79■■□□□ 1.56
NCKAP1-201ENST00000360982 PSMA5P28066 241 aa24.79■■□□□ 1.56
NCKAP1-201ENST00000360982 PRM3Q9NNZ6 103 aa24.79■■□□□ 1.56
NCKAP1-201ENST00000360982 IQGAP2Q13576 1575 aa24.78■■□□□ 1.56
NCKAP1-201ENST00000360982 FOXD4L6Q3SYB3 417 aaPredicted RBP24.78■■□□□ 1.56
NCKAP1-201ENST00000360982 FOXD4L3Q6VB84 417 aaPredicted RBP24.78■■□□□ 1.56
NCKAP1-201ENST00000360982 NUDT16Q96DE0 195 aaKnown RBP24.78■■□□□ 1.56
NCKAP1-201ENST00000360982 GNAI2P04899 355 aa24.78■■□□□ 1.56
NCKAP1-201ENST00000360982 CNNM1Q9NRU3 951 aa24.78■■□□□ 1.56
NCKAP1-201ENST00000360982 FYB1O15117 783 aa24.77■■□□□ 1.56
NCKAP1-201ENST00000360982 SLC3A2P08195 630 aaKnown RBP24.77■■□□□ 1.56
NCKAP1-201ENST00000360982 BRMS1Q9HCU9 246 aa24.77■■□□□ 1.56
NCKAP1-201ENST00000360982 IPO7O95373 1038 aaKnown RBP24.77■■□□□ 1.56
NCKAP1-201ENST00000360982 CCT4P50991 539 aaKnown RBP24.77■■□□□ 1.56
NCKAP1-201ENST00000360982 SLC4A2P04920 1241 aa24.76■■□□□ 1.55
NCKAP1-201ENST00000360982 BICD2Q8TD16 824 aa24.76■■□□□ 1.55
NCKAP1-201ENST00000360982 VPS37CA5D8V6 355 aaPredicted RBP24.76■■□□□ 1.55
NCKAP1-201ENST00000360982 RRP9O43818 475 aaKnown RBP24.76■■□□□ 1.55
NCKAP1-201ENST00000360982 PPP6R1Q9UPN7 881 aa24.76■■□□□ 1.55
NCKAP1-201ENST00000360982 SAMD1Q6SPF0 538 aaPredicted RBP24.75■■□□□ 1.55
NCKAP1-201ENST00000360982 CCDC158Q5M9N0 1113 aa24.75■■□□□ 1.55
NCKAP1-201ENST00000360982 SRCIN1Q9C0H9 1055 aa24.75■■□□□ 1.55
NCKAP1-201ENST00000360982 TIAM1Q13009 1591 aa24.75■■□□□ 1.55
NCKAP1-201ENST00000360982 NUCB2P80303 420 aa24.75■■□□□ 1.55
NCKAP1-201ENST00000360982 NBPF8Q3BBV2 869 aa24.75■■□□□ 1.55
NCKAP1-201ENST00000360982 PDE4CQ08493 712 aa24.74■■□□□ 1.55
NCKAP1-201ENST00000360982 MTERF4Q7Z6M4 381 aaKnown RBP24.74■■□□□ 1.55
NCKAP1-201ENST00000360982 SUPT6HQ7KZ85 1726 aaKnown RBP24.73■■□□□ 1.55
NCKAP1-201ENST00000360982 PDE3AQ14432 1141 aa24.73■■□□□ 1.55
NCKAP1-201ENST00000360982 WDR63Q8IWG1 891 aa24.73■■□□□ 1.55
NCKAP1-201ENST00000360982 FCHSD2O94868 740 aa24.73■■□□□ 1.55
NCKAP1-201ENST00000360982 ZC3H6P61129 1189 aaKnown RBP24.73■■□□□ 1.55
NCKAP1-201ENST00000360982 ADGRL1O94910 1474 aa24.72■■□□□ 1.55
NCKAP1-201ENST00000360982 IKQ13123 557 aaPredicted RBP24.72■■□□□ 1.55
NCKAP1-201ENST00000360982 R3HCC1Q9Y3T6 440 aaKnown RBP24.72■■□□□ 1.55
NCKAP1-201ENST00000360982 DMRT2Q9Y5R5 561 aa24.72■■□□□ 1.55
NCKAP1-201ENST00000360982 ARHGEF11O15085 1522 aa24.71■■□□□ 1.55
NCKAP1-201ENST00000360982 PPP1R1BQ9UD71 204 aaPredicted RBP24.71■■□□□ 1.55
NCKAP1-201ENST00000360982 CCDC73Q6ZRK6 1079 aa24.71■■□□□ 1.55
NCKAP1-201ENST00000360982 BICRAQ9NZM4 1560 aa24.71■■□□□ 1.55
NCKAP1-201ENST00000360982 GRIN2AQ12879 1464 aa24.7■■□□□ 1.55
NCKAP1-201ENST00000360982 GCC1Q96CN9 775 aa24.7■■□□□ 1.55
NCKAP1-201ENST00000360982 MPHOSPH8Q99549 860 aa24.7■■□□□ 1.55
NCKAP1-201ENST00000360982 ZNF428Q96B54 188 aa24.7■■□□□ 1.54
NCKAP1-201ENST00000360982 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.7■■□□□ 1.545e-8■■□□□ 14.2
NCKAP1-201ENST00000360982 GOLGA6L1Q8N7Z2 621 aa24.7■■□□□ 1.54
NCKAP1-201ENST00000360982 DNAJC2Q99543 621 aaKnown RBP24.69■■□□□ 1.54
NCKAP1-201ENST00000360982 CDK13Q14004 1512 aaKnown RBP24.69■■□□□ 1.54
NCKAP1-201ENST00000360982 C22orf23Q9BZE7 217 aa24.69■■□□□ 1.54
NCKAP1-201ENST00000360982 PCMTD1Q96MG8 357 aaPredicted RBP24.69■■□□□ 1.54
NCKAP1-201ENST00000360982 BACH2Q9BYV9 841 aa24.69■■□□□ 1.54
NCKAP1-201ENST00000360982 XPCQ01831 940 aaPredicted RBP24.68■■□□□ 1.54
NCKAP1-201ENST00000360982 CCDC57Q2TAC2 916 aa24.67■■□□□ 1.54
NCKAP1-201ENST00000360982 RRS1Q15050 365 aaKnown RBP24.66■■□□□ 1.54
NCKAP1-201ENST00000360982 TTC39AQ5SRH9 613 aa24.66■■□□□ 1.54
NCKAP1-201ENST00000360982 STARD3NLO95772 234 aa24.66■■□□□ 1.54
NCKAP1-201ENST00000360982 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.65■■□□□ 1.54
NCKAP1-201ENST00000360982 NACAP1Q9BZK3 213 aa24.65■■□□□ 1.54
NCKAP1-201ENST00000360982 BTBD11A6QL63 1104 aa24.65■■□□□ 1.54
NCKAP1-201ENST00000360982 CCAR1Q8IX12 1150 aaKnown RBP24.65■■□□□ 1.54
NCKAP1-201ENST00000360982 TSR2Q969E8 191 aaKnown RBP24.65■■□□□ 1.54
NCKAP1-201ENST00000360982 PHF8Q9UPP1 1060 aa24.64■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms