RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 SENP3Q9H4L4 574 aaPredicted RBP9.41□□□□□ -0.9
CDC42SE2-201ENST00000360515 CICQ96RK0 1608 aaPredicted RBP9.4□□□□□ -0.9
CDC42SE2-201ENST00000360515 DDX17Q92841 729 aaKnown RBP9.4□□□□□ -0.91
CDC42SE2-201ENST00000360515 ADAMTS2O95450 1211 aa9.38□□□□□ -0.91
CDC42SE2-201ENST00000360515 PSME1Q06323 249 aa9.37□□□□□ -0.91
CDC42SE2-201ENST00000360515 POLR3AO14802 1390 aaPredicted RBP9.37□□□□□ -0.91
CDC42SE2-201ENST00000360515 SF3B2Q13435 895 aaKnown RBP9.37□□□□□ -0.91
CDC42SE2-201ENST00000360515 LY75O60449 1722 aa9.36□□□□□ -0.91
CDC42SE2-201ENST00000360515 SPATA31A1Q5TZJ5 1347 aa9.36□□□□□ -0.91
CDC42SE2-201ENST00000360515 DEFB132Q7Z7B7 95 aa9.36□□□□□ -0.91
CDC42SE2-201ENST00000360515 TUBGCP6Q96RT7 1819 aa9.36□□□□□ -0.91
CDC42SE2-201ENST00000360515 BCANQ96GW7 911 aa9.36□□□□□ -0.91
CDC42SE2-201ENST00000360515 FAM208AQ9UK61 1670 aaKnown RBP9.36□□□□□ -0.91
CDC42SE2-201ENST00000360515 THRAP3Q9Y2W1 955 aaKnown RBP9.35□□□□□ -0.91
CDC42SE2-201ENST00000360515 USP19O94966 1318 aa9.34□□□□□ -0.91
CDC42SE2-201ENST00000360515 FAM196AQ6ZSG2 479 aa9.34□□□□□ -0.91
CDC42SE2-201ENST00000360515 SSH2Q76I76 1423 aa9.33□□□□□ -0.92
CDC42SE2-201ENST00000360515 PLSCR1O15162 318 aa9.33□□□□□ -0.92
CDC42SE2-201ENST00000360515 FAM83GA6ND36 823 aa9.33□□□□□ -0.92
CDC42SE2-201ENST00000360515 PLEKHH1Q9ULM0 1364 aa9.33□□□□□ -0.92
CDC42SE2-201ENST00000360515 KRT28Q7Z3Y7 464 aa9.33□□□□□ -0.92
CDC42SE2-201ENST00000360515 C14orf93Q9H972 538 aaKnown RBP9.33□□□□□ -0.92
CDC42SE2-201ENST00000360515 SGIP1Q9BQI5 828 aa9.32□□□□□ -0.92
CDC42SE2-201ENST00000360515 STAC3Q96MF2 364 aa9.32□□□□□ -0.92
CDC42SE2-201ENST00000360515 CHIC2Q9UKJ5 165 aa9.31□□□□□ -0.92
CDC42SE2-201ENST00000360515 PIK3C2AO00443 1686 aa9.31□□□□□ -0.92
CDC42SE2-201ENST00000360515 KCNQ2O43526 872 aa9.31□□□□□ -0.92
CDC42SE2-201ENST00000360515 YY1P25490 414 aa9.31□□□□□ -0.92
CDC42SE2-201ENST00000360515 KIF13BQ9NQT8 1826 aa9.31□□□□□ -0.92
CDC42SE2-201ENST00000360515 ESCO1Q5FWF5 840 aa9.3□□□□□ -0.92
CDC42SE2-201ENST00000360515 PHF8Q9UPP1 1060 aa9.3□□□□□ -0.92
CDC42SE2-201ENST00000360515 COL5A2P05997 1499 aaPredicted RBP9.3□□□□□ -0.92
CDC42SE2-201ENST00000360515 OVOS2A0A0G2JMS6 1433 aa9.29□□□□□ -0.92
CDC42SE2-201ENST00000360515 OVOS2A0A0J9YW53 1432 aa9.29□□□□□ -0.92
CDC42SE2-201ENST00000360515 OVOS2Q6IE36 1432 aa9.29□□□□□ -0.92
CDC42SE2-201ENST00000360515 ZNF831Q5JPB2 1677 aa9.28□□□□□ -0.92
CDC42SE2-201ENST00000360515 MON2Q7Z3U7 1717 aa9.28□□□□□ -0.92
CDC42SE2-201ENST00000360515 PTGER2P43116 358 aa9.28□□□□□ -0.92
CDC42SE2-201ENST00000360515 BTAF1O14981 1849 aa9.27□□□□□ -0.92
CDC42SE2-201ENST00000360515 ADCY9O60503 1353 aa9.27□□□□□ -0.93
CDC42SE2-201ENST00000360515 FOXO3O43524 673 aa9.27□□□□□ -0.93
CDC42SE2-201ENST00000360515 KIAA1551Q9HCM1 1747 aa9.27□□□□□ -0.93
CDC42SE2-201ENST00000360515 ADGRF5Q8IZF2 1346 aa9.27□□□□□ -0.93
CDC42SE2-201ENST00000360515 EN1Q05925 392 aaPredicted RBP9.27□□□□□ -0.93
CDC42SE2-201ENST00000360515 EZH2Q15910 746 aaKnown RBP9.27□□□□□ -0.93
CDC42SE2-201ENST00000360515 SPON1Q9HCB6 807 aa9.27□□□□□ -0.93
CDC42SE2-201ENST00000360515 R3HDM1Q15032 1099 aaKnown RBP9.25□□□□□ -0.93
CDC42SE2-201ENST00000360515 CRB1P82279 1406 aa9.25□□□□□ -0.93
CDC42SE2-201ENST00000360515 NFAT5O94916 1531 aa9.25□□□□□ -0.93
CDC42SE2-201ENST00000360515 CHGAP10645 457 aaKnown RBP9.24□□□□□ -0.93
CDC42SE2-201ENST00000360515 C1QTNF8P60827 252 aa9.24□□□□□ -0.93
CDC42SE2-201ENST00000360515 EHMT2Q96KQ7 1210 aa9.24□□□□□ -0.93
CDC42SE2-201ENST00000360515 NBPF8Q3BBV2 869 aa9.24□□□□□ -0.93
CDC42SE2-201ENST00000360515 NBPF14Q5TI25 921 aa9.24□□□□□ -0.93
CDC42SE2-201ENST00000360515 ZNF784Q8NCA9 323 aaPredicted RBP9.24□□□□□ -0.93
CDC42SE2-201ENST00000360515 RGPD5Q99666 1765 aa9.24□□□□□ -0.93
CDC42SE2-201ENST00000360515 ZNF326Q5BKZ1 582 aaKnown RBP9.23□□□□□ -0.93
CDC42SE2-201ENST00000360515 PSDA5PKW4 1024 aaPredicted RBP9.23□□□□□ -0.93
CDC42SE2-201ENST00000360515 TAF1LQ8IZX4 1826 aa9.22□□□□□ -0.93
CDC42SE2-201ENST00000360515 GPRASP1Q5JY77 1395 aa9.22□□□□□ -0.93
CDC42SE2-201ENST00000360515 PRR36Q9H6K5 1346 aa9.22□□□□□ -0.93
CDC42SE2-201ENST00000360515 PLEKHG3A1L390 1219 aa9.22□□□□□ -0.93
CDC42SE2-201ENST00000360515 BTG4Q9NY30 223 aa9.22□□□□□ -0.93
CDC42SE2-201ENST00000360515 TNS2Q63HR2 1409 aa9.21□□□□□ -0.93
CDC42SE2-201ENST00000360515 CDCA7Q9BWT1 371 aaPredicted RBP9.21□□□□□ -0.93
CDC42SE2-201ENST00000360515 KIAA0232Q92628 1395 aa9.21□□□□□ -0.94
CDC42SE2-201ENST00000360515 C10orf71Q711Q0 1435 aa9.21□□□□□ -0.94
CDC42SE2-201ENST00000360515 FAM98CQ17RN3 349 aaKnown RBP9.21□□□□□ -0.94
CDC42SE2-201ENST00000360515 BCL11BQ9C0K0 894 aaPredicted RBP9.21□□□□□ -0.94
CDC42SE2-201ENST00000360515 BRCA1P38398 1863 aaKnown RBP9.2□□□□□ -0.94
CDC42SE2-201ENST00000360515 WDR90Q96KV7 1748 aa9.19□□□□□ -0.94
CDC42SE2-201ENST00000360515 WAPLQ7Z5K2 1190 aa9.19□□□□□ -0.94
CDC42SE2-201ENST00000360515 APLP2Q06481 763 aa9.19□□□□□ -0.94
CDC42SE2-201ENST00000360515 C5P01031 1676 aa9.18□□□□□ -0.94
CDC42SE2-201ENST00000360515 TCP11L2Q8N4U5 519 aa9.18□□□□□ -0.94
CDC42SE2-201ENST00000360515 TOGARAM1Q9Y4F4 1720 aa9.17□□□□□ -0.94
CDC42SE2-201ENST00000360515 LTN1O94822 1766 aa9.17□□□□□ -0.94
CDC42SE2-201ENST00000360515 DCAF8L1A6NGE4 600 aa9.17□□□□□ -0.94
CDC42SE2-201ENST00000360515 WASLO00401 505 aaPredicted RBP9.17□□□□□ -0.94
CDC42SE2-201ENST00000360515 FAM50AQ14320 339 aaKnown RBP9.17□□□□□ -0.94
CDC42SE2-201ENST00000360515 MTFR1LQ9H019 292 aa9.17□□□□□ -0.94
CDC42SE2-201ENST00000360515 ARFGEF1Q9Y6D6 1849 aa9.16□□□□□ -0.94
CDC42SE2-201ENST00000360515 APBA3O96018 575 aa9.16□□□□□ -0.94
CDC42SE2-201ENST00000360515 PROM2Q8N271 834 aa9.16□□□□□ -0.94
CDC42SE2-201ENST00000360515 SLC16A10Q8TF71 515 aa9.16□□□□□ -0.94
CDC42SE2-201ENST00000360515 CPSF1Q10570 1443 aaKnown RBP9.16□□□□□ -0.94
CDC42SE2-201ENST00000360515 PKD1L3Q7Z443 1732 aa9.15□□□□□ -0.94
CDC42SE2-201ENST00000360515 TRIM37O94972 964 aa9.14□□□□□ -0.95
CDC42SE2-201ENST00000360515 CCDC7Q96M83 1385 aa9.14□□□□□ -0.95
CDC42SE2-201ENST00000360515 TNRC6CQ9HCJ0 1690 aaKnown RBP9.14□□□□□ -0.95
CDC42SE2-201ENST00000360515 MAP2P11137 1827 aaKnown RBP9.13□□□□□ -0.95
CDC42SE2-201ENST00000360515 DOT1LQ8TEK3 1739 aa9.13□□□□□ -0.95
CDC42SE2-201ENST00000360515 XPCQ01831 940 aaPredicted RBP9.13□□□□□ -0.95
CDC42SE2-201ENST00000360515 CABLES1Q8TDN4 633 aa9.13□□□□□ -0.95
CDC42SE2-201ENST00000360515 UBR3Q6ZT12 1888 aa9.13□□□□□ -0.95
CDC42SE2-201ENST00000360515 USP31Q70CQ4 1352 aa9.13□□□□□ -0.95
CDC42SE2-201ENST00000360515 ANO8Q9HCE9 1232 aaPredicted RBP9.13□□□□□ -0.95
CDC42SE2-201ENST00000360515 USP6P35125 1406 aa9.13□□□□□ -0.95
CDC42SE2-201ENST00000360515 PLEKHG2Q9H7P9 1386 aa9.13□□□□□ -0.95
CDC42SE2-201ENST00000360515 SYT17Q9BSW7 474 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms