RNA–Protein interactions for RNA: ENST00000360439.8

SIN3A-201, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 5,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-201ENST00000360439 GOLGA6L22H0YM25 854 aa12.26□□□□□ -0.45
SIN3A-201ENST00000360439 ZC3H6P61129 1189 aaKnown RBP12.26□□□□□ -0.45
SIN3A-201ENST00000360439 ZNF692Q9BU19 519 aaPredicted RBP12.26□□□□□ -0.45
SIN3A-201ENST00000360439 RRP7AQ9Y3A4 280 aaKnown RBP12.26□□□□□ -0.45
SIN3A-201ENST00000360439 NOS1P29475 1434 aa12.26□□□□□ -0.45
SIN3A-201ENST00000360439 KCNJ4P48050 445 aa12.26□□□□□ -0.45
SIN3A-201ENST00000360439 CADPS2Q86UW7 1296 aa12.26□□□□□ -0.45
SIN3A-201ENST00000360439 DIAPH1O60610 1272 aaKnown RBP12.26□□□□□ -0.45
SIN3A-201ENST00000360439 TEFQ10587 303 aa12.26□□□□□ -0.45
SIN3A-201ENST00000360439 PPP4R3BQ5MIZ7 849 aa12.26□□□□□ -0.45
SIN3A-201ENST00000360439 MTERF4Q7Z6M4 381 aaKnown RBP12.26□□□□□ -0.45
SIN3A-201ENST00000360439 SLKQ9H2G2 1235 aaPredicted RBP12.26□□□□□ -0.45
SIN3A-201ENST00000360439 YEATS2Q9ULM3 1422 aa12.25□□□□□ -0.45
SIN3A-201ENST00000360439 PARD3Q8TEW0 1356 aa12.25□□□□□ -0.45
SIN3A-201ENST00000360439 GTF2E1P29083 439 aaPredicted RBP12.25□□□□□ -0.45
SIN3A-201ENST00000360439 TRERF1Q96PN7 1200 aa12.25□□□□□ -0.45
SIN3A-201ENST00000360439 LRPPRCP42704 1394 aaKnown RBP12.24□□□□□ -0.45
SIN3A-201ENST00000360439 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.24□□□□□ -0.45
SIN3A-201ENST00000360439 TOM1L2Q6ZVM7 507 aa12.24□□□□□ -0.45
SIN3A-201ENST00000360439 ABCA8O94911 1581 aa12.24□□□□□ -0.45
SIN3A-201ENST00000360439 PLIN1O60240 522 aa12.24□□□□□ -0.45
SIN3A-201ENST00000360439 KDM5CP41229 1560 aa12.24□□□□□ -0.45
SIN3A-201ENST00000360439 POLR1AO95602 1720 aaPredicted RBP12.24□□□□□ -0.45
SIN3A-201ENST00000360439 KDM6BO15054 1643 aa12.24□□□□□ -0.45
SIN3A-201ENST00000360439 HSCBQ8IWL3 235 aa12.24□□□□□ -0.45
SIN3A-201ENST00000360439 PHF8Q9UPP1 1060 aa12.24□□□□□ -0.45
SIN3A-201ENST00000360439 PPP2R1AP30153 589 aa12.23□□□□□ -0.45
SIN3A-201ENST00000360439 CCDC66A2RUB6 948 aa12.23□□□□□ -0.45
SIN3A-201ENST00000360439 HMOX1P09601 288 aa12.23□□□□□ -0.45
SIN3A-201ENST00000360439 PRAG1Q86YV5 1406 aa12.23□□□□□ -0.45
SIN3A-201ENST00000360439 IPO8O15397 1037 aaKnown RBP12.22□□□□□ -0.45
SIN3A-201ENST00000360439 MBD5Q9P267 1494 aa12.22□□□□□ -0.45
SIN3A-201ENST00000360439 MSH6P52701 1360 aa12.22□□□□□ -0.45
SIN3A-201ENST00000360439 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.22□□□□□ -0.458e-8■■■□□ 18.8
SIN3A-201ENST00000360439 CBX1P83916 185 aa12.22□□□□□ -0.45
SIN3A-201ENST00000360439 LMOD3Q0VAK6 560 aa12.22□□□□□ -0.45
SIN3A-201ENST00000360439 ARHGEF5Q12774 1597 aa12.22□□□□□ -0.45
SIN3A-201ENST00000360439 TTC5Q8N0Z6 440 aa12.21□□□□□ -0.45
SIN3A-201ENST00000360439 NGLY1Q96IV0 654 aa12.21□□□□□ -0.45
SIN3A-201ENST00000360439 ZBTB12Q9Y330 459 aaPredicted RBP12.21□□□□□ -0.45
SIN3A-201ENST00000360439 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.21□□□□□ -0.45
SIN3A-201ENST00000360439 SPRYD3Q8NCJ5 442 aa12.21□□□□□ -0.45
SIN3A-201ENST00000360439 STK31Q9BXU1 1019 aa12.21□□□□□ -0.45
SIN3A-201ENST00000360439 ZFYVE16Q7Z3T8 1539 aa12.21□□□□□ -0.45
SIN3A-201ENST00000360439 ADCY10Q96PN6 1610 aa12.21□□□□□ -0.45
SIN3A-201ENST00000360439 ATP7AQ04656 1500 aa12.21□□□□□ -0.46
SIN3A-201ENST00000360439 CHAF1AQ13111 956 aaPredicted RBP12.2□□□□□ -0.46
SIN3A-201ENST00000360439 ZMYM4Q5VZL5 1548 aa12.2□□□□□ -0.46
SIN3A-201ENST00000360439 KDM5DQ9BY66 1539 aa12.2□□□□□ -0.46
SIN3A-201ENST00000360439 RIMS2Q9UQ26 1411 aa12.2□□□□□ -0.46
SIN3A-201ENST00000360439 ADAMTS8Q9UP79 889 aa12.2□□□□□ -0.46
SIN3A-201ENST00000360439 PDE3AQ14432 1141 aa12.2□□□□□ -0.46
SIN3A-201ENST00000360439 CASC1Q6TDU7 716 aa12.2□□□□□ -0.46
SIN3A-201ENST00000360439 ELL2O00472 640 aaPredicted RBP12.19□□□□□ -0.46
SIN3A-201ENST00000360439 SF3B2Q13435 895 aaKnown RBP12.19□□□□□ -0.46
SIN3A-201ENST00000360439 C14orf93Q9H972 538 aaKnown RBP12.19□□□□□ -0.46
SIN3A-201ENST00000360439 WASLO00401 505 aaPredicted RBP12.19□□□□□ -0.46
SIN3A-201ENST00000360439 LMTK3Q96Q04 1460 aa12.19□□□□□ -0.46
SIN3A-201ENST00000360439 ZCCHC11Q5TAX3 1644 aaKnown RBP12.19□□□□□ -0.46
SIN3A-201ENST00000360439 GOLGA6L6A8MZA4 724 aa12.18□□□□□ -0.46
SIN3A-201ENST00000360439 CDCA7LQ96GN5 454 aa12.18□□□□□ -0.46
SIN3A-201ENST00000360439 FBXO3Q9UK99 471 aa12.18□□□□□ -0.46
SIN3A-201ENST00000360439 LRRIQ1Q96JM4 1722 aa12.18□□□□□ -0.46
SIN3A-201ENST00000360439 COL17A1Q9UMD9 1497 aaPredicted RBP12.18□□□□□ -0.46
SIN3A-201ENST00000360439 MTHFSP49914 203 aa12.18□□□□□ -0.46
SIN3A-201ENST00000360439 RIMBP3CA6NJZ7 1639 aa12.18□□□□□ -0.46
SIN3A-201ENST00000360439 RIMBP3BA6NNM3 1639 aa12.18□□□□□ -0.46
SIN3A-201ENST00000360439 RIMBP3Q9UFD9 1639 aa12.18□□□□□ -0.46
SIN3A-201ENST00000360439 KRT28Q7Z3Y7 464 aa12.18□□□□□ -0.46
SIN3A-201ENST00000360439 DDX54Q8TDD1 881 aaKnown RBP12.18□□□□□ -0.46
SIN3A-201ENST00000360439 ATAD2Q6PL18 1390 aa12.17□□□□□ -0.46
SIN3A-201ENST00000360439 BANK1Q8NDB2 785 aa12.17□□□□□ -0.46
SIN3A-201ENST00000360439 KCNA6P17658 529 aa12.17□□□□□ -0.46
SIN3A-201ENST00000360439 RUNDC1Q96C34 613 aa12.17□□□□□ -0.46
SIN3A-201ENST00000360439 DNAJC2Q99543 621 aaKnown RBP12.17□□□□□ -0.46
SIN3A-201ENST00000360439 CROCC2H7BZ55 1655 aa12.17□□□□□ -0.46
SIN3A-201ENST00000360439 SCAF11Q99590 1463 aaKnown RBP12.17□□□□□ -0.46
SIN3A-201ENST00000360439 FRAT2O75474 233 aaPredicted RBP12.17□□□□□ -0.46
SIN3A-201ENST00000360439 AXDND1Q5T1B0 1012 aaPredicted RBP12.17□□□□□ -0.46
SIN3A-201ENST00000360439 TMX4Q9H1E5 349 aaPredicted RBP12.17□□□□□ -0.46
SIN3A-201ENST00000360439 APAF1O14727 1248 aa12.16□□□□□ -0.46
SIN3A-201ENST00000360439 HSP90AB1P08238 724 aaKnown RBP12.16□□□□□ -0.46
SIN3A-201ENST00000360439 RRS1Q15050 365 aaKnown RBP12.16□□□□□ -0.46
SIN3A-201ENST00000360439 CLUAP1Q96AJ1 413 aa12.16□□□□□ -0.46
SIN3A-201ENST00000360439 ZNF622Q969S3 477 aaKnown RBP eCLIP12.15□□□□□ -0.462e-6■■□□□ 13.9
SIN3A-201ENST00000360439 NKTRP30414 1462 aaKnown RBP12.15□□□□□ -0.46
SIN3A-201ENST00000360439 GBP4Q96PP9 640 aa12.15□□□□□ -0.46
SIN3A-201ENST00000360439 C19orf44Q9H6X5 657 aa12.15□□□□□ -0.46
SIN3A-201ENST00000360439 BLMP54132 1417 aaPredicted RBP12.15□□□□□ -0.46
SIN3A-201ENST00000360439 ESPNB1AK53 854 aa12.15□□□□□ -0.46
SIN3A-201ENST00000360439 EIF2S2P20042 333 aaKnown RBP12.15□□□□□ -0.46
SIN3A-201ENST00000360439 GOLGA6L1Q8N7Z2 621 aa12.15□□□□□ -0.46
SIN3A-201ENST00000360439 CLSTN1O94985 981 aa12.15□□□□□ -0.46
SIN3A-201ENST00000360439 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.14□□□□□ -0.47
SIN3A-201ENST00000360439 CHMP3Q9Y3E7 222 aa12.14□□□□□ -0.47
SIN3A-201ENST00000360439 CLASP1Q7Z460 1538 aa12.14□□□□□ -0.47
SIN3A-201ENST00000360439 DDX11L8A8MPP1 907 aa12.14□□□□□ -0.47
SIN3A-201ENST00000360439 SLC4A10Q6U841 1118 aa12.14□□□□□ -0.47
SIN3A-201ENST00000360439 CNKSR2Q8WXI2 1034 aa12.14□□□□□ -0.47
SIN3A-201ENST00000360439 MYCNP04198 464 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms