RNA–Protein interactions for RNA: ENST00000359785.9

PTPN22-201, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN22, Length 3,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-201ENST00000359785 CACNB1Q02641 598 aaPredicted RBP5.82□□□□□ -1.48
PTPN22-201ENST00000359785 SYCP1Q15431 976 aa5.82□□□□□ -1.48
PTPN22-201ENST00000359785 NRXN3Q9Y4C0 1643 aa5.82□□□□□ -1.48
PTPN22-201ENST00000359785 ZNF445P59923 1031 aa5.81□□□□□ -1.48
PTPN22-201ENST00000359785 RRAGDQ9NQL2 400 aaPredicted RBP5.81□□□□□ -1.48
PTPN22-201ENST00000359785 NSD3Q9BZ95 1437 aa5.81□□□□□ -1.48
PTPN22-201ENST00000359785 KDM3BQ7LBC6 1761 aa5.81□□□□□ -1.48
PTPN22-201ENST00000359785 FAM50AQ14320 339 aaKnown RBP5.81□□□□□ -1.48
PTPN22-201ENST00000359785 SKOR2Q2VWA4 1001 aaPredicted RBP5.81□□□□□ -1.48
PTPN22-201ENST00000359785 CREBRFQ8IUR6 639 aa5.81□□□□□ -1.48
PTPN22-201ENST00000359785 BCANQ96GW7 911 aa5.81□□□□□ -1.48
PTPN22-201ENST00000359785 ADGRL3Q9HAR2 1447 aa5.81□□□□□ -1.48
PTPN22-201ENST00000359785 DDX11L8A8MPP1 907 aa5.81□□□□□ -1.48
PTPN22-201ENST00000359785 CYP2E1P05181 493 aaPredicted RBP5.81□□□□□ -1.48
PTPN22-201ENST00000359785 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.81□□□□□ -1.48
PTPN22-201ENST00000359785 EXOC6Q8TAG9 804 aa5.81□□□□□ -1.48
PTPN22-201ENST00000359785 OFD1O75665 1012 aa5.8□□□□□ -1.48
PTPN22-201ENST00000359785 WDR63Q8IWG1 891 aa5.8□□□□□ -1.48
PTPN22-201ENST00000359785 ZNF428Q96B54 188 aa5.8□□□□□ -1.48
PTPN22-201ENST00000359785 CFAP44Q96MT7 982 aa5.8□□□□□ -1.48
PTPN22-201ENST00000359785 CD163L1Q9NR16 1453 aa5.8□□□□□ -1.48
PTPN22-201ENST00000359785 E9PSI1 815 aa5.79□□□□□ -1.48
PTPN22-201ENST00000359785 OSCARQ8IYS5 282 aa5.79□□□□□ -1.48
PTPN22-201ENST00000359785 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.79□□□□□ -1.48
PTPN22-201ENST00000359785 CCDC173Q0VFZ6 552 aa5.78□□□□□ -1.48
PTPN22-201ENST00000359785 BECN1Q14457 450 aa5.78□□□□□ -1.48
PTPN22-201ENST00000359785 RAB3GAP1Q15042 981 aa5.78□□□□□ -1.48
PTPN22-201ENST00000359785 CDCA8Q53HL2 280 aa5.78□□□□□ -1.48
PTPN22-201ENST00000359785 MRC1P22897 1456 aa5.78□□□□□ -1.48
PTPN22-201ENST00000359785 ARHGEF10O15013 1369 aa5.78□□□□□ -1.48
PTPN22-201ENST00000359785 PMFBP1Q8TBY8 1022 aa5.78□□□□□ -1.48
PTPN22-201ENST00000359785 KCND1Q9NSA2 647 aa5.78□□□□□ -1.48
PTPN22-201ENST00000359785 PTPRMP28827 1452 aa5.78□□□□□ -1.48
PTPN22-201ENST00000359785 POGZQ7Z3K3 1410 aa5.77□□□□□ -1.49
PTPN22-201ENST00000359785 LMO7Q8WWI1 1683 aa5.77□□□□□ -1.49
PTPN22-201ENST00000359785 CD109Q6YHK3 1445 aa5.77□□□□□ -1.49
PTPN22-201ENST00000359785 FAM53CQ9NYF3 392 aa5.77□□□□□ -1.49
PTPN22-201ENST00000359785 DIP2CQ9Y2E4 1556 aa5.77□□□□□ -1.49
PTPN22-201ENST00000359785 ADAMTSL3P82987 1691 aa5.77□□□□□ -1.49
PTPN22-201ENST00000359785 GOLGA6L3A6NEY3 463 aa5.77□□□□□ -1.49
PTPN22-201ENST00000359785 XRCC6P12956 609 aaKnown RBP eCLIP5.77□□□□□ -1.49
PTPN22-201ENST00000359785 TAF3Q5VWG9 929 aa5.77□□□□□ -1.49
PTPN22-201ENST00000359785 DYNC1I1O14576 645 aa5.76□□□□□ -1.49
PTPN22-201ENST00000359785 MCM4P33991 863 aa5.76□□□□□ -1.49
PTPN22-201ENST00000359785 BRPF3Q9ULD4 1205 aa5.76□□□□□ -1.49
PTPN22-201ENST00000359785 PLEKHD1A6NEE1 506 aa5.76□□□□□ -1.49
PTPN22-201ENST00000359785 CRBNQ96SW2 442 aa5.76□□□□□ -1.49
PTPN22-201ENST00000359785 SPEF2Q9C093 1822 aa5.76□□□□□ -1.49
PTPN22-201ENST00000359785 CHMP5Q9NZZ3 219 aa5.76□□□□□ -1.49
PTPN22-201ENST00000359785 PLEKHG2Q9H7P9 1386 aa5.76□□□□□ -1.49
PTPN22-201ENST00000359785 NOL7Q9UMY1 257 aaKnown RBP5.75□□□□□ -1.49
PTPN22-201ENST00000359785 MAP2P11137 1827 aaKnown RBP5.75□□□□□ -1.49
PTPN22-201ENST00000359785 PEAK1Q9H792 1746 aa5.75□□□□□ -1.49
PTPN22-201ENST00000359785 KIF20AO95235 890 aa5.75□□□□□ -1.49
PTPN22-201ENST00000359785 PPP2R1AP30153 589 aa5.75□□□□□ -1.49
PTPN22-201ENST00000359785 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.75□□□□□ -1.49
PTPN22-201ENST00000359785 TECPR2O15040 1411 aa5.74□□□□□ -1.49
PTPN22-201ENST00000359785 TMEM87AQ8NBN3 555 aa5.74□□□□□ -1.49
PTPN22-201ENST00000359785 GTPBP4Q9BZE4 634 aaKnown RBP5.74□□□□□ -1.49
PTPN22-201ENST00000359785 SPTLC3Q9NUV7 552 aa5.74□□□□□ -1.49
PTPN22-201ENST00000359785 GOLGA2Q08379 1002 aa5.73□□□□□ -1.49
PTPN22-201ENST00000359785 DMTNQ08495 405 aa5.73□□□□□ -1.49
PTPN22-201ENST00000359785 KLHL40Q2TBA0 621 aa5.73□□□□□ -1.49
PTPN22-201ENST00000359785 CLUAP1Q96AJ1 413 aa5.73□□□□□ -1.49
PTPN22-201ENST00000359785 ARHGAP45Q92619 1136 aa5.73□□□□□ -1.49
PTPN22-201ENST00000359785 SLC4A1APQ9BWU0 796 aaKnown RBP5.73□□□□□ -1.49
PTPN22-201ENST00000359785 NWD1Q149M9 1564 aa5.73□□□□□ -1.49
PTPN22-201ENST00000359785 RPGRIP1LQ68CZ1 1315 aa5.73□□□□□ -1.49
PTPN22-201ENST00000359785 ESPNB1AK53 854 aa5.72□□□□□ -1.49
PTPN22-201ENST00000359785 CSPP1Q1MSJ5 1256 aa5.72□□□□□ -1.49
PTPN22-201ENST00000359785 RGS22Q8NE09 1264 aa5.72□□□□□ -1.49
PTPN22-201ENST00000359785 TMC1Q8TDI8 760 aa5.72□□□□□ -1.49
PTPN22-201ENST00000359785 TMF1P82094 1093 aa5.72□□□□□ -1.49
PTPN22-201ENST00000359785 LAMA4Q16363 1823 aa5.72□□□□□ -1.49
PTPN22-201ENST00000359785 RGS12O14924 1447 aa5.72□□□□□ -1.49
PTPN22-201ENST00000359785 ZSCAN30Q86W11 494 aa5.72□□□□□ -1.49
PTPN22-201ENST00000359785 KIF2CQ99661 725 aa5.72□□□□□ -1.49
PTPN22-201ENST00000359785 TBC1D2Q9BYX2 928 aa5.72□□□□□ -1.49
PTPN22-201ENST00000359785 GRPEL1Q9HAV7 217 aa5.72□□□□□ -1.49
PTPN22-201ENST00000359785 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.72□□□□□ -1.49
PTPN22-201ENST00000359785 ERBB4Q15303 1308 aa5.72□□□□□ -1.49
PTPN22-201ENST00000359785 FRAT2O75474 233 aaPredicted RBP5.71□□□□□ -1.49
PTPN22-201ENST00000359785 HMGN5P82970 282 aaKnown RBP5.71□□□□□ -1.49
PTPN22-201ENST00000359785 ALDH1L2Q3SY69 923 aa5.71□□□□□ -1.49
PTPN22-201ENST00000359785 HIRIP3Q9BW71 556 aaPredicted RBP5.71□□□□□ -1.49
PTPN22-201ENST00000359785 ALKQ9UM73 1620 aa5.71□□□□□ -1.49
PTPN22-201ENST00000359785 AATKQ6ZMQ8 1374 aa5.71□□□□□ -1.49
PTPN22-201ENST00000359785 ZNF142P52746 1687 aaPredicted RBP5.71□□□□□ -1.5
PTPN22-201ENST00000359785 PRIMPOLQ96LW4 560 aa5.71□□□□□ -1.5
PTPN22-201ENST00000359785 RIPK4P57078 832 aa5.71□□□□□ -1.5
PTPN22-201ENST00000359785 PKD2Q13563 968 aa5.71□□□□□ -1.5
PTPN22-201ENST00000359785 BMP2KLQ5H9B9 411 aa5.71□□□□□ -1.5
PTPN22-201ENST00000359785 LAMB4A4D0S4 1761 aa5.7□□□□□ -1.5
PTPN22-201ENST00000359785 UVSSAQ2YD98 709 aa5.7□□□□□ -1.5
PTPN22-201ENST00000359785 EFCAB2Q5VUJ9 269 aa5.7□□□□□ -1.5
PTPN22-201ENST00000359785 ECM29Q5VYK3 1845 aa5.7□□□□□ -1.5
PTPN22-201ENST00000359785 ATP10DQ9P241 1426 aa5.7□□□□□ -1.5
PTPN22-201ENST00000359785 TJP1Q07157 1748 aa5.7□□□□□ -1.5
PTPN22-201ENST00000359785 CTIFO43310 598 aaKnown RBP5.7□□□□□ -1.5
PTPN22-201ENST00000359785 PLEKHG5O94827 1062 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms