RNA–Protein interactions for RNA: ENST00000359726.7

APP-206, Transcript of amyloid beta precursor protein, humanhuman

TSL 2 BASIC

Gene APP, Length 3,294 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-206ENST00000359726 WDR63Q8IWG1 891 aa9.39□□□□□ -0.91
APP-206ENST00000359726 UHRF1BP1LA0JNW5 1464 aa9.39□□□□□ -0.91
APP-206ENST00000359726 PTPRTO14522 1441 aa9.39□□□□□ -0.91
APP-206ENST00000359726 GAS2L2Q8NHY3 880 aa9.39□□□□□ -0.91
APP-206ENST00000359726 ANKRD26Q9UPS8 1709 aa9.39□□□□□ -0.91
APP-206ENST00000359726 STAC3Q96MF2 364 aa9.39□□□□□ -0.91
APP-206ENST00000359726 ZHX1Q9UKY1 873 aaPredicted RBP9.39□□□□□ -0.91
APP-206ENST00000359726 NRXN1Q9ULB1 1477 aa9.39□□□□□ -0.91
APP-206ENST00000359726 NUCB1Q02818 461 aa9.38□□□□□ -0.91
APP-206ENST00000359726 MYRIPQ8NFW9 859 aa9.38□□□□□ -0.91
APP-206ENST00000359726 VWDEQ8N2E2 1590 aa9.38□□□□□ -0.91
APP-206ENST00000359726 MROH2AA6NES4 1674 aa9.38□□□□□ -0.91
APP-206ENST00000359726 MSNP26038 577 aaKnown RBP9.37□□□□□ -0.91
APP-206ENST00000359726 GPT2Q8TD30 523 aa9.37□□□□□ -0.91
APP-206ENST00000359726 QRICH2Q9H0J4 1663 aa9.37□□□□□ -0.91
APP-206ENST00000359726 COL3A1P02461 1466 aaPredicted RBP9.37□□□□□ -0.91
APP-206ENST00000359726 GTPBP4Q9BZE4 634 aaKnown RBP9.37□□□□□ -0.91
APP-206ENST00000359726 K7ELQ4 463 aaPredicted RBP9.37□□□□□ -0.91
APP-206ENST00000359726 PRDM10Q9NQV6 1147 aa9.37□□□□□ -0.91
APP-206ENST00000359726 TMEM51Q9NW97 253 aa9.37□□□□□ -0.91
APP-206ENST00000359726 MYOM2P54296 1465 aa9.37□□□□□ -0.91
APP-206ENST00000359726 TET3O43151 1660 aa9.36□□□□□ -0.91
APP-206ENST00000359726 CD109Q6YHK3 1445 aa9.36□□□□□ -0.91
APP-206ENST00000359726 KIF20AO95235 890 aa9.36□□□□□ -0.91
APP-206ENST00000359726 PRIM1P49642 420 aaKnown RBP9.36□□□□□ -0.91
APP-206ENST00000359726 CSPP1Q1MSJ5 1256 aa9.36□□□□□ -0.91
APP-206ENST00000359726 SETBP1Q9Y6X0 1596 aa9.36□□□□□ -0.91
APP-206ENST00000359726 ATP2B3Q16720 1220 aa9.36□□□□□ -0.91
APP-206ENST00000359726 JARID2Q92833 1246 aaPredicted RBP9.36□□□□□ -0.91
APP-206ENST00000359726 ZBTB40Q9NUA8 1239 aa9.36□□□□□ -0.91
APP-206ENST00000359726 BMP2KLQ5H9B9 411 aa9.36□□□□□ -0.91
APP-206ENST00000359726 ZDHHC9Q9Y397 364 aa9.36□□□□□ -0.91
APP-206ENST00000359726 SBNO2Q9Y2G9 1366 aa9.35□□□□□ -0.91
APP-206ENST00000359726 PPP4R3BQ5MIZ7 849 aa9.35□□□□□ -0.91
APP-206ENST00000359726 ADGRB1O14514 1584 aa9.34□□□□□ -0.91
APP-206ENST00000359726 SLC24A1O60721 1099 aa9.34□□□□□ -0.91
APP-206ENST00000359726 RBM42Q9BTD8 480 aaKnown RBP9.34□□□□□ -0.91
APP-206ENST00000359726 TRIM27P14373 513 aa9.34□□□□□ -0.91
APP-206ENST00000359726 PIK3R4Q99570 1358 aa9.34□□□□□ -0.91
APP-206ENST00000359726 PPIP5K1Q6PFW1 1433 aa9.34□□□□□ -0.91
APP-206ENST00000359726 RGL3Q3MIN7 710 aa9.34□□□□□ -0.91
APP-206ENST00000359726 RUNDC1Q96C34 613 aa9.34□□□□□ -0.91
APP-206ENST00000359726 CT47B1P0C2W7 299 aaPredicted RBP9.33□□□□□ -0.92
APP-206ENST00000359726 HMGN5P82970 282 aaKnown RBP9.33□□□□□ -0.92
APP-206ENST00000359726 SPTLC3Q9NUV7 552 aa9.33□□□□□ -0.92
APP-206ENST00000359726 CDC42BPGQ6DT37 1551 aa9.33□□□□□ -0.92
APP-206ENST00000359726 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.33□□□□□ -0.92
APP-206ENST00000359726 KIF16BQ96L93 1317 aa9.33□□□□□ -0.92
APP-206ENST00000359726 PKP1Q13835 747 aa9.33□□□□□ -0.92
APP-206ENST00000359726 LRSAM1Q6UWE0 723 aa9.33□□□□□ -0.92
APP-206ENST00000359726 TMEM63CQ9P1W3 806 aa9.33□□□□□ -0.92
APP-206ENST00000359726 ZNF777Q9ULD5 760 aaPredicted RBP9.33□□□□□ -0.92
APP-206ENST00000359726 NSFL1CQ9UNZ2 370 aaKnown RBP9.33□□□□□ -0.92
APP-206ENST00000359726 LETM1O95202 739 aaPredicted RBP9.32□□□□□ -0.92
APP-206ENST00000359726 DZIP1LQ8IYY4 767 aaKnown RBP9.32□□□□□ -0.92
APP-206ENST00000359726 ANKRD7Q92527 254 aa9.32□□□□□ -0.92
APP-206ENST00000359726 DDX49Q9Y6V7 483 aaKnown RBP9.32□□□□□ -0.92
APP-206ENST00000359726 RIMBP3CA6NJZ7 1639 aa9.32□□□□□ -0.92
APP-206ENST00000359726 RIMBP3BA6NNM3 1639 aa9.32□□□□□ -0.92
APP-206ENST00000359726 RIMBP3Q9UFD9 1639 aa9.32□□□□□ -0.92
APP-206ENST00000359726 KIF1BO60333 1816 aa9.32□□□□□ -0.92
APP-206ENST00000359726 MROH1Q8NDA8 1641 aa9.32□□□□□ -0.92
APP-206ENST00000359726 HNRNPMP52272 730 aaKnown RBP eCLIP9.32□□□□□ -0.921e-6■□□□□ 11.1
APP-206ENST00000359726 ZKSCAN2Q63HK3 967 aa9.32□□□□□ -0.92
APP-206ENST00000359726 TCP11L2Q8N4U5 519 aa9.32□□□□□ -0.92
APP-206ENST00000359726 BCL2L13Q9BXK5 485 aa9.32□□□□□ -0.92
APP-206ENST00000359726 PPLO60437 1756 aa9.32□□□□□ -0.92
APP-206ENST00000359726 TCHHQ07283 1943 aa9.31□□□□□ -0.92
APP-206ENST00000359726 CDCA8Q53HL2 280 aa9.31□□□□□ -0.92
APP-206ENST00000359726 TBC1D9Q6ZT07 1266 aa9.31□□□□□ -0.92
APP-206ENST00000359726 CCDC39Q9UFE4 941 aa9.31□□□□□ -0.92
APP-206ENST00000359726 PRIMPOLQ96LW4 560 aa9.31□□□□□ -0.92
APP-206ENST00000359726 CANXP27824 592 aaKnown RBP9.3□□□□□ -0.92
APP-206ENST00000359726 PDE4CQ08493 712 aa9.3□□□□□ -0.92
APP-206ENST00000359726 CAVIN1Q6NZI2 390 aaKnown RBP9.3□□□□□ -0.92
APP-206ENST00000359726 AEBP2Q6ZN18 517 aaPredicted RBP9.3□□□□□ -0.92
APP-206ENST00000359726 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.3□□□□□ -0.92
APP-206ENST00000359726 CHD1LQ86WJ1 897 aa9.3□□□□□ -0.92
APP-206ENST00000359726 PIBF1Q8WXW3 757 aa9.3□□□□□ -0.92
APP-206ENST00000359726 RBM27Q9P2N5 1060 aaKnown RBP9.3□□□□□ -0.92
APP-206ENST00000359726 CTIFO43310 598 aaKnown RBP9.29□□□□□ -0.92
APP-206ENST00000359726 BRPF1P55201 1214 aaPredicted RBP9.29□□□□□ -0.92
APP-206ENST00000359726 PLEKHF1Q96S99 279 aa9.29□□□□□ -0.92
APP-206ENST00000359726 DDX19BQ9UMR2 479 aa9.29□□□□□ -0.92
APP-206ENST00000359726 ABCC11Q96J66 1382 aa9.29□□□□□ -0.92
APP-206ENST00000359726 ARHGEF28Q8N1W1 1705 aaKnown RBP9.29□□□□□ -0.92
APP-206ENST00000359726 PTCH1Q13635 1447 aa9.29□□□□□ -0.92
APP-206ENST00000359726 FKBP5Q13451 457 aaPredicted RBP9.29□□□□□ -0.92
APP-206ENST00000359726 CHMP7Q8WUX9 453 aaPredicted RBP9.29□□□□□ -0.92
APP-206ENST00000359726 BBXQ8WY36 941 aaPredicted RBP9.29□□□□□ -0.92
APP-206ENST00000359726 TSC1Q92574 1164 aa9.29□□□□□ -0.92
APP-206ENST00000359726 TRAPPC8Q9Y2L5 1435 aa9.29□□□□□ -0.92
APP-206ENST00000359726 TSPY4P0CV99 314 aa9.29□□□□□ -0.92
APP-206ENST00000359726 TSPY10P0CW01 314 aa9.29□□□□□ -0.92
APP-206ENST00000359726 GLI2P10070 1586 aa9.28□□□□□ -0.92
APP-206ENST00000359726 ATF7IPQ6VMQ6 1270 aa9.28□□□□□ -0.92
APP-206ENST00000359726 RSPH4AQ5TD94 716 aa9.28□□□□□ -0.92
APP-206ENST00000359726 MCTP1Q6DN14 999 aa9.28□□□□□ -0.92
APP-206ENST00000359726 SSH1Q8WYL5 1049 aa9.28□□□□□ -0.92
APP-206ENST00000359726 RRP7AQ9Y3A4 280 aaKnown RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms