RNA–Protein interactions for RNA: ENST00000359551.6

SHARPIN-201, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 1 (best)

Gene SHARPIN, Length 1,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-201ENST00000359551 ESCO1Q5FWF5 840 aa33.71■■■□□ 2.99
SHARPIN-201ENST00000359551 TTC21BQ7Z4L5 1316 aa33.69■■■□□ 2.98
SHARPIN-201ENST00000359551 PPP2R1AP30153 589 aa33.69■■■□□ 2.98
SHARPIN-201ENST00000359551 MORC1Q86VD1 984 aa33.69■■■□□ 2.98
SHARPIN-201ENST00000359551 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.69■■■□□ 2.98
SHARPIN-201ENST00000359551 ORAI2Q96SN7 254 aa33.68■■■□□ 2.98
SHARPIN-201ENST00000359551 GGNBP2Q9H3C7 697 aa33.68■■■□□ 2.98
SHARPIN-201ENST00000359551 MRS2Q9HD23 443 aa33.68■■■□□ 2.98
SHARPIN-201ENST00000359551 TTC21AQ8NDW8 1320 aa33.66■■■□□ 2.98
SHARPIN-201ENST00000359551 USP54Q70EL1 1684 aa33.64■■■□□ 2.97
SHARPIN-201ENST00000359551 NME9Q86XW9 330 aa33.63■■■□□ 2.97
SHARPIN-201ENST00000359551 PIK3C2AO00443 1686 aa33.62■■■□□ 2.97
SHARPIN-201ENST00000359551 TRPM3Q9HCF6 1732 aaPredicted RBP33.59■■■□□ 2.97
SHARPIN-201ENST00000359551 OVOS2A0A0J9YW53 1432 aa33.59■■■□□ 2.97
SHARPIN-201ENST00000359551 OVOS2Q6IE36 1432 aa33.59■■■□□ 2.97
SHARPIN-201ENST00000359551 SCAF1Q9H7N4 1312 aaKnown RBP33.58■■■□□ 2.97
SHARPIN-201ENST00000359551 MARF1Q9Y4F3 1742 aaKnown RBP33.57■■■□□ 2.96
SHARPIN-201ENST00000359551 USP31Q70CQ4 1352 aa33.57■■■□□ 2.96
SHARPIN-201ENST00000359551 PSME1Q06323 249 aa33.55■■■□□ 2.96
SHARPIN-201ENST00000359551 MAP2P11137 1827 aaKnown RBP33.54■■■□□ 2.96
SHARPIN-201ENST00000359551 FOXO3O43524 673 aa33.54■■■□□ 2.96
SHARPIN-201ENST00000359551 COG3Q96JB2 828 aa33.54■■■□□ 2.96
SHARPIN-201ENST00000359551 SLAIN2Q9P270 581 aa33.54■■■□□ 2.96
SHARPIN-201ENST00000359551 ZRANB1Q9UGI0 708 aa33.54■■■□□ 2.96
SHARPIN-201ENST00000359551 TNNT2P45379 298 aaPredicted RBP33.52■■■□□ 2.96
SHARPIN-201ENST00000359551 PNISRQ8TF01 805 aaKnown RBP33.52■■■□□ 2.96
SHARPIN-201ENST00000359551 AATKQ6ZMQ8 1374 aa33.51■■■□□ 2.95
SHARPIN-201ENST00000359551 BRINP3Q76B58 766 aa33.49■■■□□ 2.95
SHARPIN-201ENST00000359551 ALS2Q96Q42 1657 aa33.48■■■□□ 2.95
SHARPIN-201ENST00000359551 NPHP3Q7Z494 1330 aa33.47■■■□□ 2.95
SHARPIN-201ENST00000359551 KRT28Q7Z3Y7 464 aa33.46■■■□□ 2.95
SHARPIN-201ENST00000359551 SMG6Q86US8 1419 aaKnown RBP33.45■■■□□ 2.95
SHARPIN-201ENST00000359551 PXDNQ92626 1479 aa33.45■■■□□ 2.95
SHARPIN-201ENST00000359551 MTHFSP49914 203 aa33.45■■■□□ 2.94
SHARPIN-201ENST00000359551 PAK3O75914 559 aaPredicted RBP33.44■■■□□ 2.94
SHARPIN-201ENST00000359551 NHSL1Q5SYE7 1610 aa33.43■■■□□ 2.94
SHARPIN-201ENST00000359551 ABTB2Q8N961 1025 aa33.43■■■□□ 2.94
SHARPIN-201ENST00000359551 SBNO1A3KN83 1393 aa33.42■■■□□ 2.94
SHARPIN-201ENST00000359551 FAM9BQ8IZU0 186 aa33.42■■■□□ 2.94
SHARPIN-201ENST00000359551 SHPRHQ149N8 1683 aa33.41■■■□□ 2.94
SHARPIN-201ENST00000359551 XPCQ01831 940 aaPredicted RBP33.41■■■□□ 2.94
SHARPIN-201ENST00000359551 NLRP6P59044 892 aa33.4■■■□□ 2.94
SHARPIN-201ENST00000359551 POLKQ9UBT6 870 aa33.39■■■□□ 2.94
SHARPIN-201ENST00000359551 COL3A1P02461 1466 aaPredicted RBP33.39■■■□□ 2.94
SHARPIN-201ENST00000359551 YTHDC1Q96MU7 727 aaKnown RBP33.39■■■□□ 2.94
SHARPIN-201ENST00000359551 PNPLA6Q8IY17 1366 aa33.38■■■□□ 2.93
SHARPIN-201ENST00000359551 IQSEC2Q5JU85 1478 aa33.37■■■□□ 2.93
SHARPIN-201ENST00000359551 INSRP06213 1382 aa33.37■■■□□ 2.93
SHARPIN-201ENST00000359551 DDX17Q92841 729 aaKnown RBP33.36■■■□□ 2.93
SHARPIN-201ENST00000359551 CFAP53Q96M91 514 aa33.36■■■□□ 2.93
SHARPIN-201ENST00000359551 CDK12Q9NYV4 1490 aaPredicted RBP33.36■■■□□ 2.93
SHARPIN-201ENST00000359551 ROBO1Q9Y6N7 1651 aa33.35■■■□□ 2.93
SHARPIN-201ENST00000359551 FBLN1P23142 703 aa33.35■■■□□ 2.93
SHARPIN-201ENST00000359551 SLIT3O75094 1523 aa33.34■■■□□ 2.93
SHARPIN-201ENST00000359551 TNS3Q68CZ2 1445 aa33.34■■■□□ 2.93
SHARPIN-201ENST00000359551 SOS2Q07890 1332 aaPredicted RBP33.33■■■□□ 2.93
SHARPIN-201ENST00000359551 NUTM2GQ5VZR2 741 aa33.32■■■□□ 2.92
SHARPIN-201ENST00000359551 PEAK1Q9H792 1746 aa33.31■■■□□ 2.92
SHARPIN-201ENST00000359551 NFAT5O94916 1531 aa33.31■■■□□ 2.92
SHARPIN-201ENST00000359551 EMILIN1Q9Y6C2 1016 aa33.3■■■□□ 2.92
SHARPIN-201ENST00000359551 USP19O94966 1318 aa33.3■■■□□ 2.92
SHARPIN-201ENST00000359551 SPATA31A3Q5VYP0 1347 aa33.29■■■□□ 2.92
SHARPIN-201ENST00000359551 RRS1Q15050 365 aaKnown RBP33.28■■■□□ 2.92
SHARPIN-201ENST00000359551 CRYBG1Q9Y4K1 1723 aa33.28■■■□□ 2.92
SHARPIN-201ENST00000359551 AHDC1Q5TGY3 1603 aaPredicted RBP33.28■■■□□ 2.92
SHARPIN-201ENST00000359551 LTN1O94822 1766 aa33.28■■■□□ 2.92
SHARPIN-201ENST00000359551 WDR43Q15061 677 aaKnown RBP eCLIP33.27■■■□□ 2.92
SHARPIN-201ENST00000359551 MED1Q15648 1581 aaPredicted RBP33.27■■■□□ 2.92
SHARPIN-201ENST00000359551 BLMP54132 1417 aaPredicted RBP33.26■■■□□ 2.92
SHARPIN-201ENST00000359551 PHRF1Q9P1Y6 1649 aaKnown RBP33.25■■■□□ 2.91
SHARPIN-201ENST00000359551 ARHGEF10O15013 1369 aa33.25■■■□□ 2.91
SHARPIN-201ENST00000359551 KIF24Q5T7B8 1368 aa33.24■■■□□ 2.91
SHARPIN-201ENST00000359551 KCNH5Q8NCM2 988 aa33.24■■■□□ 2.91
SHARPIN-201ENST00000359551 ADAMTS8Q9UP79 889 aa33.24■■■□□ 2.91
SHARPIN-201ENST00000359551 MAP3K19Q56UN5 1328 aa33.23■■■□□ 2.91
SHARPIN-201ENST00000359551 TOM1O60784 492 aa33.22■■■□□ 2.91
SHARPIN-201ENST00000359551 PPM1GO15355 546 aaPredicted RBP33.21■■■□□ 2.91
SHARPIN-201ENST00000359551 LMOD2Q6P5Q4 547 aa33.21■■■□□ 2.91
SHARPIN-201ENST00000359551 SOX12O15370 315 aa33.2■■■□□ 2.91
SHARPIN-201ENST00000359551 FLT4P35916 1363 aa33.19■■■□□ 2.9
SHARPIN-201ENST00000359551 DIAPH1O60610 1272 aaKnown RBP33.19■■■□□ 2.9
SHARPIN-201ENST00000359551 HNRNPUQ00839 825 aaKnown RBP eCLIP33.18■■■□□ 2.9
SHARPIN-201ENST00000359551 GCP02774 474 aa33.17■■■□□ 2.9
SHARPIN-201ENST00000359551 RTL1A6NKG5 1358 aa33.17■■■□□ 2.9
SHARPIN-201ENST00000359551 NUDCQ9Y266 331 aa33.17■■■□□ 2.9
SHARPIN-201ENST00000359551 CERKQ8TCT0 537 aa33.15■■■□□ 2.9
SHARPIN-201ENST00000359551 ABCA3Q99758 1704 aa33.14■■■□□ 2.9
SHARPIN-201ENST00000359551 IL13P35225 146 aa33.13■■■□□ 2.89
SHARPIN-201ENST00000359551 PHLPP1O60346 1717 aa33.12■■■□□ 2.89
SHARPIN-201ENST00000359551 RGPD1P0DJD0 1748 aa33.12■■■□□ 2.89
SHARPIN-201ENST00000359551 AMPHP49418 695 aa33.11■■■□□ 2.89
SHARPIN-201ENST00000359551 HSP90AB2PQ58FF8 381 aa33.1■■■□□ 2.89
SHARPIN-201ENST00000359551 COL16A1Q07092 1604 aaPredicted RBP33.1■■■□□ 2.89
SHARPIN-201ENST00000359551 ARHGEF25Q86VW2 580 aa33.1■■■□□ 2.89
SHARPIN-201ENST00000359551 HOXC9P31274 260 aa33.09■■■□□ 2.89
SHARPIN-201ENST00000359551 UBAP1LF5GYI3 381 aa33.08■■■□□ 2.89
SHARPIN-201ENST00000359551 U2AF1L5P0DN76 240 aaPredicted RBP33.08■■■□□ 2.89
SHARPIN-201ENST00000359551 U2AF1Q01081 240 aaKnown RBP eCLIP33.08■■■□□ 2.89
SHARPIN-201ENST00000359551 COL22A1Q8NFW1 1626 aaPredicted RBP33.07■■■□□ 2.88
SHARPIN-201ENST00000359551 EIF4A2Q14240 407 aaKnown RBP33.07■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms