RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 KNSTRNQ9Y448 316 aa18.93■□□□□ 0.62
UBAP1-202ENST00000359544 BCAR3O75815 825 aa18.93■□□□□ 0.62
UBAP1-202ENST00000359544 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.93■□□□□ 0.62
UBAP1-202ENST00000359544 MYH16Q9H6N6 1097 aa18.93■□□□□ 0.62
UBAP1-202ENST00000359544 HDGFP51858 240 aaKnown RBP18.92■□□□□ 0.62
UBAP1-202ENST00000359544 NGEFQ8N5V2 710 aa18.92■□□□□ 0.62
UBAP1-202ENST00000359544 CHMP5Q9NZZ3 219 aa18.92■□□□□ 0.62
UBAP1-202ENST00000359544 TRAK2O60296 914 aa18.92■□□□□ 0.62
UBAP1-202ENST00000359544 PMFBP1Q8TBY8 1022 aa18.92■□□□□ 0.62
UBAP1-202ENST00000359544 PLEKHG1Q9ULL1 1385 aa18.91■□□□□ 0.62
UBAP1-202ENST00000359544 ESPNB1AK53 854 aa18.91■□□□□ 0.62
UBAP1-202ENST00000359544 TPM2P07951 284 aa18.91■□□□□ 0.62
UBAP1-202ENST00000359544 GZF1Q9H116 711 aaPredicted RBP18.91■□□□□ 0.62
UBAP1-202ENST00000359544 NEXMIFQ5QGS0 1516 aa18.9■□□□□ 0.62
UBAP1-202ENST00000359544 STRCP1A6NGW2 1772 aa18.9■□□□□ 0.62
UBAP1-202ENST00000359544 ADGRF5Q8IZF2 1346 aa18.9■□□□□ 0.62
UBAP1-202ENST00000359544 DDX11L8A8MPP1 907 aa18.9■□□□□ 0.62
UBAP1-202ENST00000359544 GRPEL1Q9HAV7 217 aa18.89■□□□□ 0.61
UBAP1-202ENST00000359544 CANXP27824 592 aaKnown RBP18.89■□□□□ 0.61
UBAP1-202ENST00000359544 ADAMTS13Q76LX8 1427 aa18.89■□□□□ 0.61
UBAP1-202ENST00000359544 ILDR1Q86SU0 546 aaPredicted RBP18.87■□□□□ 0.61
UBAP1-202ENST00000359544 TRIM44Q96DX7 344 aaPredicted RBP18.87■□□□□ 0.61
UBAP1-202ENST00000359544 CENPJQ9HC77 1338 aaPredicted RBP18.87■□□□□ 0.61
UBAP1-202ENST00000359544 ASXL1Q8IXJ9 1541 aa18.86■□□□□ 0.61
UBAP1-202ENST00000359544 AMER1Q5JTC6 1135 aaPredicted RBP18.86■□□□□ 0.61
UBAP1-202ENST00000359544 SPINK5Q9NQ38 1064 aaPredicted RBP18.85■□□□□ 0.61
UBAP1-202ENST00000359544 NPC1L1Q9UHC9 1359 aa18.85■□□□□ 0.61
UBAP1-202ENST00000359544 COG6Q9Y2V7 657 aa18.84■□□□□ 0.61
UBAP1-202ENST00000359544 METP08581 1390 aa18.84■□□□□ 0.61
UBAP1-202ENST00000359544 VGFO15240 615 aaPredicted RBP18.84■□□□□ 0.61
UBAP1-202ENST00000359544 APAF1O14727 1248 aa18.83■□□□□ 0.61
UBAP1-202ENST00000359544 KCNA6P17658 529 aa18.83■□□□□ 0.61
UBAP1-202ENST00000359544 CDCA8Q53HL2 280 aa18.83■□□□□ 0.61
UBAP1-202ENST00000359544 CCDC146Q8IYE0 955 aa18.83■□□□□ 0.61
UBAP1-202ENST00000359544 PDCL3Q9H2J4 239 aa18.83■□□□□ 0.61
UBAP1-202ENST00000359544 TBX22Q9Y458 520 aa18.83■□□□□ 0.6
UBAP1-202ENST00000359544 NRXN3Q9Y4C0 1643 aa18.83■□□□□ 0.6
UBAP1-202ENST00000359544 PANK1Q8TE04 598 aa18.82■□□□□ 0.6
UBAP1-202ENST00000359544 PTPRUQ92729 1446 aa18.81■□□□□ 0.6
UBAP1-202ENST00000359544 PROSER2Q86WR7 435 aaPredicted RBP18.81■□□□□ 0.6
UBAP1-202ENST00000359544 RPGRIP1LQ68CZ1 1315 aa18.81■□□□□ 0.6
UBAP1-202ENST00000359544 PPLO60437 1756 aa18.81■□□□□ 0.6
UBAP1-202ENST00000359544 TMEM132EQ6IEE7 984 aa18.8■□□□□ 0.6
UBAP1-202ENST00000359544 SPRYD3Q8NCJ5 442 aa18.8■□□□□ 0.6
UBAP1-202ENST00000359544 AMOTL2Q9Y2J4 779 aa18.8■□□□□ 0.6
UBAP1-202ENST00000359544 LRRC7Q96NW7 1537 aa18.8■□□□□ 0.6
UBAP1-202ENST00000359544 ERBB4Q15303 1308 aa18.8■□□□□ 0.6
UBAP1-202ENST00000359544 PDZRN3Q9UPQ7 1066 aa18.8■□□□□ 0.6
UBAP1-202ENST00000359544 UBAP1LF5GYI3 381 aa18.79■□□□□ 0.6
UBAP1-202ENST00000359544 RWDD1Q9H446 243 aaPredicted RBP18.79■□□□□ 0.6
UBAP1-202ENST00000359544 PTMSP20962 102 aa18.78■□□□□ 0.6
UBAP1-202ENST00000359544 HSCBQ8IWL3 235 aa18.78■□□□□ 0.6
UBAP1-202ENST00000359544 C22orf23Q9BZE7 217 aa18.78■□□□□ 0.6
UBAP1-202ENST00000359544 TMEM94Q12767 1356 aa18.78■□□□□ 0.6
UBAP1-202ENST00000359544 STK26Q9P289 416 aa18.78■□□□□ 0.6
UBAP1-202ENST00000359544 PIP4K2BP78356 416 aa18.77■□□□□ 0.6
UBAP1-202ENST00000359544 CFAP70Q5T0N1 1121 aa18.77■□□□□ 0.6
UBAP1-202ENST00000359544 SETBP1Q9Y6X0 1596 aa18.77■□□□□ 0.59
UBAP1-202ENST00000359544 FBXO41Q8TF61 875 aa18.76■□□□□ 0.59
UBAP1-202ENST00000359544 CPS1P31327 1500 aa18.76■□□□□ 0.59
UBAP1-202ENST00000359544 SKOR2Q2VWA4 1001 aaPredicted RBP18.75■□□□□ 0.59
UBAP1-202ENST00000359544 ALKQ9UM73 1620 aa18.75■□□□□ 0.59
UBAP1-202ENST00000359544 PCDHB15Q9Y5E8 787 aa18.74■□□□□ 0.59
UBAP1-202ENST00000359544 NCOA3Q9Y6Q9 1424 aa18.74■□□□□ 0.59
UBAP1-202ENST00000359544 IFT172Q9UG01 1749 aa18.74■□□□□ 0.59
UBAP1-202ENST00000359544 C14orf37Q86TY3 774 aa18.74■□□□□ 0.59
UBAP1-202ENST00000359544 GBP4Q96PP9 640 aa18.73■□□□□ 0.59
UBAP1-202ENST00000359544 ZNF692Q9BU19 519 aaPredicted RBP18.73■□□□□ 0.59
UBAP1-202ENST00000359544 CHD2O14647 1828 aaKnown RBP18.73■□□□□ 0.59
UBAP1-202ENST00000359544 CIZ1Q9ULV3 898 aaPredicted RBP18.72■□□□□ 0.59
UBAP1-202ENST00000359544 CALD1Q05682 793 aaKnown RBP18.72■□□□□ 0.59
UBAP1-202ENST00000359544 CCDC173Q0VFZ6 552 aa18.72■□□□□ 0.59
UBAP1-202ENST00000359544 MYOM1P52179 1685 aa18.71■□□□□ 0.59
UBAP1-202ENST00000359544 WWC1Q8IX03 1113 aa18.71■□□□□ 0.59
UBAP1-202ENST00000359544 RARSP54136 660 aaKnown RBP18.71■□□□□ 0.59
UBAP1-202ENST00000359544 MFAP1P55081 439 aaKnown RBP18.71■□□□□ 0.59
UBAP1-202ENST00000359544 XIRP1Q702N8 1843 aaKnown RBP18.7■□□□□ 0.58
UBAP1-202ENST00000359544 TERF1P54274 439 aa18.7■□□□□ 0.58
UBAP1-202ENST00000359544 KIAA1211Q6ZU35 1233 aa18.7■□□□□ 0.58
UBAP1-202ENST00000359544 DIP2AQ14689 1571 aa18.7■□□□□ 0.58
UBAP1-202ENST00000359544 DDIT3P35638 169 aa18.7■□□□□ 0.58
UBAP1-202ENST00000359544 NWD1Q149M9 1564 aa18.69■□□□□ 0.58
UBAP1-202ENST00000359544 SETD1AO15047 1707 aaKnown RBP18.69■□□□□ 0.58
UBAP1-202ENST00000359544 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.68■□□□□ 0.58
UBAP1-202ENST00000359544 MAP7D2Q96T17 732 aa18.68■□□□□ 0.58
UBAP1-202ENST00000359544 ROBO2Q9HCK4 1378 aa18.68■□□□□ 0.58
UBAP1-202ENST00000359544 WAPLQ7Z5K2 1190 aa18.68■□□□□ 0.58
UBAP1-202ENST00000359544 ANP32BQ92688 251 aaKnown RBP18.68■□□□□ 0.58
UBAP1-202ENST00000359544 SNX21Q969T3 373 aa18.68■□□□□ 0.58
UBAP1-202ENST00000359544 C14orf93Q9H972 538 aaKnown RBP18.68■□□□□ 0.58
UBAP1-202ENST00000359544 ZSCAN30Q86W11 494 aa18.67■□□□□ 0.58
UBAP1-202ENST00000359544 PPP1R9BQ96SB3 815 aa18.67■□□□□ 0.58
UBAP1-202ENST00000359544 PIK3R4Q99570 1358 aa18.67■□□□□ 0.58
UBAP1-202ENST00000359544 OFD1O75665 1012 aa18.66■□□□□ 0.58
UBAP1-202ENST00000359544 SAFB2Q14151 953 aaKnown RBP eCLIP18.66■□□□□ 0.58
UBAP1-202ENST00000359544 SMC5Q8IY18 1101 aa18.66■□□□□ 0.58
UBAP1-202ENST00000359544 TNPO1Q92973 898 aaKnown RBP18.66■□□□□ 0.58
UBAP1-202ENST00000359544 MYOM2P54296 1465 aa18.66■□□□□ 0.58
UBAP1-202ENST00000359544 GAS2L3Q86XJ1 694 aa18.66■□□□□ 0.58
UBAP1-202ENST00000359544 RLBP1P12271 317 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms