RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 U2AF1L5P0DN76 240 aaPredicted RBP16.68■□□□□ 0.26
GGPS1-202ENST00000358966 U2AF1Q01081 240 aaKnown RBP eCLIP16.68■□□□□ 0.26
GGPS1-202ENST00000358966 NKTRP30414 1462 aaKnown RBP16.67■□□□□ 0.26
GGPS1-202ENST00000358966 SOX12O15370 315 aa16.67■□□□□ 0.26
GGPS1-202ENST00000358966 ANKLE2Q86XL3 938 aa16.67■□□□□ 0.26
GGPS1-202ENST00000358966 CPSF1Q10570 1443 aaKnown RBP16.67■□□□□ 0.26
GGPS1-202ENST00000358966 KIF20BQ96Q89 1820 aa16.67■□□□□ 0.26
GGPS1-202ENST00000358966 FANCIQ9NVI1 1328 aa16.67■□□□□ 0.26
GGPS1-202ENST00000358966 SIRT1Q96EB6 747 aa16.67■□□□□ 0.26
GGPS1-202ENST00000358966 RTN4Q9NQC3 1192 aaKnown RBP16.66■□□□□ 0.26
GGPS1-202ENST00000358966 ACEP12821 1306 aa16.66■□□□□ 0.26
GGPS1-202ENST00000358966 EMILIN1Q9Y6C2 1016 aa16.66■□□□□ 0.26
GGPS1-202ENST00000358966 RGPD8O14715 1765 aaPredicted RBP16.66■□□□□ 0.26
GGPS1-202ENST00000358966 PLIN1O60240 522 aa16.65■□□□□ 0.26
GGPS1-202ENST00000358966 RRS1Q15050 365 aaKnown RBP16.65■□□□□ 0.26
GGPS1-202ENST00000358966 B4GALNT3Q6L9W6 998 aa16.65■□□□□ 0.26
GGPS1-202ENST00000358966 IL27Q8NEV9 243 aa16.65■□□□□ 0.26
GGPS1-202ENST00000358966 CFAP53Q96M91 514 aa16.65■□□□□ 0.26
GGPS1-202ENST00000358966 RCAN3Q9UKA8 241 aa16.65■□□□□ 0.26
GGPS1-202ENST00000358966 SETD1BQ9UPS6 1966 aaKnown RBP16.65■□□□□ 0.26
GGPS1-202ENST00000358966 CDC42BPGQ6DT37 1551 aa16.64■□□□□ 0.25
GGPS1-202ENST00000358966 ZNF521Q96K83 1311 aa16.64■□□□□ 0.25
GGPS1-202ENST00000358966 ANKRD26Q9UPS8 1709 aa16.64■□□□□ 0.25
GGPS1-202ENST00000358966 INSRP06213 1382 aa16.63■□□□□ 0.25
GGPS1-202ENST00000358966 PODXL2Q9NZ53 605 aa16.63■□□□□ 0.25
GGPS1-202ENST00000358966 EDC4Q6P2E9 1401 aaKnown RBP16.62■□□□□ 0.25
GGPS1-202ENST00000358966 TCP11L2Q8N4U5 519 aa16.62■□□□□ 0.25
GGPS1-202ENST00000358966 POLKQ9UBT6 870 aa16.62■□□□□ 0.25
GGPS1-202ENST00000358966 PDE3BQ13370 1112 aa16.62■□□□□ 0.25
GGPS1-202ENST00000358966 XRN1Q8IZH2 1706 aaKnown RBP16.62■□□□□ 0.25
GGPS1-202ENST00000358966 PTCH1Q13635 1447 aa16.62■□□□□ 0.25
GGPS1-202ENST00000358966 DUSP27Q5VZP5 1158 aa16.61■□□□□ 0.25
GGPS1-202ENST00000358966 ZNF142P52746 1687 aaPredicted RBP16.61■□□□□ 0.25
GGPS1-202ENST00000358966 GOLGA2Q08379 1002 aa16.61■□□□□ 0.25
GGPS1-202ENST00000358966 ADGRB2O60241 1585 aa16.61■□□□□ 0.25
GGPS1-202ENST00000358966 MAP2P11137 1827 aaKnown RBP16.61■□□□□ 0.25
GGPS1-202ENST00000358966 ITSN1Q15811 1721 aa16.61■□□□□ 0.25
GGPS1-202ENST00000358966 DIP2AQ14689 1571 aa16.61■□□□□ 0.25
GGPS1-202ENST00000358966 COL3A1P02461 1466 aaPredicted RBP16.6■□□□□ 0.25
GGPS1-202ENST00000358966 MON2Q7Z3U7 1717 aa16.6■□□□□ 0.25
GGPS1-202ENST00000358966 NUTM2GQ5VZR2 741 aa16.59■□□□□ 0.25
GGPS1-202ENST00000358966 RNF123Q5XPI4 1314 aa16.59■□□□□ 0.25
GGPS1-202ENST00000358966 AKAP12Q02952 1782 aa16.59■□□□□ 0.25
GGPS1-202ENST00000358966 HSPA2P54652 639 aa16.59■□□□□ 0.25
GGPS1-202ENST00000358966 RRP1P56182 461 aaKnown RBP16.59■□□□□ 0.25
GGPS1-202ENST00000358966 RUNDC1Q96C34 613 aa16.59■□□□□ 0.25
GGPS1-202ENST00000358966 COG3Q96JB2 828 aa16.59■□□□□ 0.25
GGPS1-202ENST00000358966 WWC1Q8IX03 1113 aa16.58■□□□□ 0.25
GGPS1-202ENST00000358966 TOPAZ1Q8N9V7 1692 aa16.58■□□□□ 0.24
GGPS1-202ENST00000358966 TTC21BQ7Z4L5 1316 aa16.58■□□□□ 0.24
GGPS1-202ENST00000358966 HMOX1P09601 288 aa16.58■□□□□ 0.24
GGPS1-202ENST00000358966 NGDNQ8NEJ9 315 aaKnown RBP16.58■□□□□ 0.24
GGPS1-202ENST00000358966 DIAPH1O60610 1272 aaKnown RBP16.57■□□□□ 0.24
GGPS1-202ENST00000358966 SLFN5Q08AF3 891 aa16.57■□□□□ 0.24
GGPS1-202ENST00000358966 USP6P35125 1406 aa16.56■□□□□ 0.24
GGPS1-202ENST00000358966 IQSEC2Q5JU85 1478 aa16.55■□□□□ 0.24
GGPS1-202ENST00000358966 PLEKHG3A1L390 1219 aa16.55■□□□□ 0.24
GGPS1-202ENST00000358966 C14orf37Q86TY3 774 aa16.55■□□□□ 0.24
GGPS1-202ENST00000358966 NPHP4O75161 1426 aaPredicted RBP16.55■□□□□ 0.24
GGPS1-202ENST00000358966 CHD2O14647 1828 aaKnown RBP16.55■□□□□ 0.24
GGPS1-202ENST00000358966 C20orf194Q5TEA3 1177 aa16.54■□□□□ 0.24
GGPS1-202ENST00000358966 NALCNQ8IZF0 1738 aa16.54■□□□□ 0.24
GGPS1-202ENST00000358966 ZNF692Q9BU19 519 aaPredicted RBP16.54■□□□□ 0.24
GGPS1-202ENST00000358966 EXOC6Q8TAG9 804 aa16.54■□□□□ 0.24
GGPS1-202ENST00000358966 PPP4R2Q9NY27 417 aa16.54■□□□□ 0.24
GGPS1-202ENST00000358966 PLEKHF1Q96S99 279 aa16.53■□□□□ 0.24
GGPS1-202ENST00000358966 NRKQ7Z2Y5 1582 aa16.53■□□□□ 0.24
GGPS1-202ENST00000358966 PNPLA6Q8IY17 1366 aa16.53■□□□□ 0.24
GGPS1-202ENST00000358966 NBR1Q14596 966 aa16.52■□□□□ 0.23
GGPS1-202ENST00000358966 PAK3O75914 559 aaPredicted RBP16.51■□□□□ 0.23
GGPS1-202ENST00000358966 XPCQ01831 940 aaPredicted RBP16.51■□□□□ 0.23
GGPS1-202ENST00000358966 PRKAR2BP31323 418 aa16.51■□□□□ 0.23
GGPS1-202ENST00000358966 PIK3R4Q99570 1358 aa16.5■□□□□ 0.23
GGPS1-202ENST00000358966 BCAR3O75815 825 aa16.5■□□□□ 0.23
GGPS1-202ENST00000358966 PHACTR3Q96KR7 559 aa16.5■□□□□ 0.23
GGPS1-202ENST00000358966 TRMT2AQ8IZ69 625 aaKnown RBP16.49■□□□□ 0.23
GGPS1-202ENST00000358966 LRRC7Q96NW7 1537 aa16.49■□□□□ 0.23
GGPS1-202ENST00000358966 MAPK8IP3Q9UPT6 1336 aa16.49■□□□□ 0.23
GGPS1-202ENST00000358966 HSP90AB2PQ58FF8 381 aa16.49■□□□□ 0.23
GGPS1-202ENST00000358966 TSR2Q969E8 191 aaKnown RBP16.49■□□□□ 0.23
GGPS1-202ENST00000358966 OVOS2A0A0J9YW53 1432 aa16.49■□□□□ 0.23
GGPS1-202ENST00000358966 OVOS2Q6IE36 1432 aa16.49■□□□□ 0.23
GGPS1-202ENST00000358966 E9PSI1 815 aa16.48■□□□□ 0.23
GGPS1-202ENST00000358966 TMPOP42166 694 aaKnown RBP16.48■□□□□ 0.23
GGPS1-202ENST00000358966 IL13P35225 146 aa16.48■□□□□ 0.23
GGPS1-202ENST00000358966 ESCO1Q5FWF5 840 aa16.48■□□□□ 0.23
GGPS1-202ENST00000358966 AEBP1Q8IUX7 1158 aa16.48■□□□□ 0.23
GGPS1-202ENST00000358966 SSH2Q76I76 1423 aa16.48■□□□□ 0.23
GGPS1-202ENST00000358966 FMN2Q9NZ56 1722 aa16.48■□□□□ 0.23
GGPS1-202ENST00000358966 BCL2L13Q9BXK5 485 aa16.47■□□□□ 0.23
GGPS1-202ENST00000358966 RSPH6AQ9H0K4 717 aa16.47■□□□□ 0.23
GGPS1-202ENST00000358966 ORAI2Q96SN7 254 aa16.47■□□□□ 0.23
GGPS1-202ENST00000358966 THUMPD2Q9BTF0 503 aaKnown RBP16.47■□□□□ 0.23
GGPS1-202ENST00000358966 PHF23Q9BUL5 403 aaPredicted RBP16.47■□□□□ 0.23
GGPS1-202ENST00000358966 TRIM35Q9UPQ4 493 aa16.47■□□□□ 0.23
GGPS1-202ENST00000358966 RIPK4P57078 832 aa16.46■□□□□ 0.23
GGPS1-202ENST00000358966 NLRP6P59044 892 aa16.46■□□□□ 0.23
GGPS1-202ENST00000358966 CRBNQ96SW2 442 aa16.46■□□□□ 0.23
GGPS1-202ENST00000358966 KDM4FA0A1W2PPD8 638 aa16.46■□□□□ 0.22
GGPS1-202ENST00000358966 CDK12Q9NYV4 1490 aaPredicted RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms