RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 SDF4Q9BRK5 362 aa7.22□□□□□ -1.25
VPS13B-203ENST00000358544 NAP1L1P55209 391 aaKnown RBP7.22□□□□□ -1.25
VPS13B-203ENST00000358544 RBM25P49756 843 aaKnown RBP7.21□□□□□ -1.25
VPS13B-203ENST00000358544 UVSSAQ2YD98 709 aa7.21□□□□□ -1.25
VPS13B-203ENST00000358544 FGD6Q6ZV73 1430 aa7.21□□□□□ -1.25
VPS13B-203ENST00000358544 TNNT1P13805 278 aa7.21□□□□□ -1.25
VPS13B-203ENST00000358544 ZRSR2Q15696 482 aaKnown RBP7.21□□□□□ -1.25
VPS13B-203ENST00000358544 ZNF396Q96N95 335 aaPredicted RBP7.21□□□□□ -1.25
VPS13B-203ENST00000358544 SFPQP23246 707 aaKnown RBP eCLIP7.21□□□□□ -1.25
VPS13B-203ENST00000358544 BMS1Q14692 1282 aaKnown RBP7.21□□□□□ -1.25
VPS13B-203ENST00000358544 PTPN14Q15678 1187 aa7.21□□□□□ -1.25
VPS13B-203ENST00000358544 TERF2IPQ9NYB0 399 aa7.21□□□□□ -1.25
VPS13B-203ENST00000358544 ADCY5O95622 1261 aa7.21□□□□□ -1.26
VPS13B-203ENST00000358544 OLFM4Q6UX06 510 aa7.21□□□□□ -1.26
VPS13B-203ENST00000358544 SHTN1A0MZ66 631 aa7.21□□□□□ -1.26
VPS13B-203ENST00000358544 GOLGA6L10A6NI86 522 aa7.21□□□□□ -1.26
VPS13B-203ENST00000358544 SPAG9O60271 1321 aaKnown RBP7.21□□□□□ -1.26
VPS13B-203ENST00000358544 LRRCC1Q9C099 1032 aa7.21□□□□□ -1.26
VPS13B-203ENST00000358544 NUP62CLQ9H1M0 184 aa7.21□□□□□ -1.26
VPS13B-203ENST00000358544 ZKSCAN5Q9Y2L8 839 aa7.21□□□□□ -1.26
VPS13B-203ENST00000358544 MNAT1P51948 309 aa7.21□□□□□ -1.26
VPS13B-203ENST00000358544 NEMFO60524 1076 aa7.2□□□□□ -1.26
VPS13B-203ENST00000358544 JAKMIP3Q5VZ66 844 aa7.2□□□□□ -1.26
VPS13B-203ENST00000358544 PPP2R1AP30153 589 aa7.2□□□□□ -1.26
VPS13B-203ENST00000358544 GABPB1Q06547 395 aaPredicted RBP7.2□□□□□ -1.26
VPS13B-203ENST00000358544 KLHL40Q2TBA0 621 aa7.2□□□□□ -1.26
VPS13B-203ENST00000358544 BCAR3O75815 825 aa7.2□□□□□ -1.26
VPS13B-203ENST00000358544 CT47A1Q5JQC4 288 aaPredicted RBP7.2□□□□□ -1.26
VPS13B-203ENST00000358544 KIF21BO75037 1637 aa7.2□□□□□ -1.26
VPS13B-203ENST00000358544 CLGNO14967 610 aa7.2□□□□□ -1.26
VPS13B-203ENST00000358544 IVLP07476 585 aa7.2□□□□□ -1.26
VPS13B-203ENST00000358544 CHMP7Q8WUX9 453 aaPredicted RBP7.2□□□□□ -1.26
VPS13B-203ENST00000358544 C20orf194Q5TEA3 1177 aa7.2□□□□□ -1.26
VPS13B-203ENST00000358544 FEZ1Q99689 392 aa7.2□□□□□ -1.26
VPS13B-203ENST00000358544 PPFIBP1Q86W92 1011 aa7.19□□□□□ -1.26
VPS13B-203ENST00000358544 CLIP2Q9UDT6 1046 aa7.19□□□□□ -1.26
VPS13B-203ENST00000358544 MVPQ14764 893 aaKnown RBP7.19□□□□□ -1.26
VPS13B-203ENST00000358544 NOLC1Q14978 699 aaKnown RBP eCLIP7.19□□□□□ -1.26
VPS13B-203ENST00000358544 MROH2BQ7Z745 1585 aa7.19□□□□□ -1.26
VPS13B-203ENST00000358544 TTC31Q49AM3 519 aaPredicted RBP7.19□□□□□ -1.26
VPS13B-203ENST00000358544 SYNE3Q6ZMZ3 975 aa7.19□□□□□ -1.26
VPS13B-203ENST00000358544 NOL7Q9UMY1 257 aaKnown RBP7.19□□□□□ -1.26
VPS13B-203ENST00000358544 EIF4G1Q04637 1599 aaKnown RBP7.19□□□□□ -1.26
VPS13B-203ENST00000358544 ERC2O15083 957 aa7.19□□□□□ -1.26
VPS13B-203ENST00000358544 CEP135Q66GS9 1140 aa7.19□□□□□ -1.26
VPS13B-203ENST00000358544 CCDC91Q7Z6B0 441 aa7.19□□□□□ -1.26
VPS13B-203ENST00000358544 WWC1Q8IX03 1113 aa7.19□□□□□ -1.26
VPS13B-203ENST00000358544 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.19□□□□□ -1.26
VPS13B-203ENST00000358544 DNAAF4Q8WXU2 420 aa7.19□□□□□ -1.26
VPS13B-203ENST00000358544 MICALCLQ6ZW33 695 aa7.19□□□□□ -1.26
VPS13B-203ENST00000358544 MAP3K11Q16584 847 aa7.19□□□□□ -1.26
VPS13B-203ENST00000358544 MAP9Q49MG5 647 aa7.19□□□□□ -1.26
VPS13B-203ENST00000358544 GCC1Q96CN9 775 aa7.19□□□□□ -1.26
VPS13B-203ENST00000358544 IQCEQ6IPM2 695 aa7.19□□□□□ -1.26
VPS13B-203ENST00000358544 BAG4O95429 457 aaKnown RBP7.19□□□□□ -1.26
VPS13B-203ENST00000358544 RSPH4AQ5TD94 716 aa7.19□□□□□ -1.26
VPS13B-203ENST00000358544 RBM27Q9P2N5 1060 aaKnown RBP7.19□□□□□ -1.26
VPS13B-203ENST00000358544 RSPH14Q9UHP6 348 aa7.19□□□□□ -1.26
VPS13B-203ENST00000358544 CCDC144AA2RUR9 1427 aa7.19□□□□□ -1.26
VPS13B-203ENST00000358544 IGSF3O75054 1194 aa7.18□□□□□ -1.26
VPS13B-203ENST00000358544 RASSF4Q9H2L5 321 aa7.18□□□□□ -1.26
VPS13B-203ENST00000358544 SPAG17Q6Q759 2223 aa7.18□□□□□ -1.26
VPS13B-203ENST00000358544 DMTNQ08495 405 aa7.18□□□□□ -1.26
VPS13B-203ENST00000358544 C8orf34Q49A92 452 aa7.18□□□□□ -1.26
VPS13B-203ENST00000358544 TOMM22Q9NS69 142 aa7.18□□□□□ -1.26
VPS13B-203ENST00000358544 TDO2P48775 406 aa7.18□□□□□ -1.26
VPS13B-203ENST00000358544 TICAM2Q86XR7 235 aa7.18□□□□□ -1.26
VPS13B-203ENST00000358544 PLEKHH1Q9ULM0 1364 aa7.18□□□□□ -1.26
VPS13B-203ENST00000358544 RBM33Q96EV2 1170 aaKnown RBP7.18□□□□□ -1.26
VPS13B-203ENST00000358544 PCMTD1Q96MG8 357 aaPredicted RBP7.18□□□□□ -1.26
VPS13B-203ENST00000358544 MYO6Q9UM54 1294 aa7.18□□□□□ -1.26
VPS13B-203ENST00000358544 PAXBP1Q9Y5B6 917 aa7.18□□□□□ -1.26
VPS13B-203ENST00000358544 PSMA5P28066 241 aa7.18□□□□□ -1.26
VPS13B-203ENST00000358544 DYDC1Q8WWB3 177 aa7.18□□□□□ -1.26
VPS13B-203ENST00000358544 GBP3Q9H0R5 595 aa7.18□□□□□ -1.26
VPS13B-203ENST00000358544 MICAL3Q7RTP6 2002 aa7.18□□□□□ -1.26
VPS13B-203ENST00000358544 IFIT2P09913 472 aaKnown RBP7.18□□□□□ -1.26
VPS13B-203ENST00000358544 NF2P35240 595 aa7.18□□□□□ -1.26
VPS13B-203ENST00000358544 ZNF397Q8NF99 534 aaPredicted RBP7.18□□□□□ -1.26
VPS13B-203ENST00000358544 TOP2AP11388 1531 aaKnown RBP7.17□□□□□ -1.26
VPS13B-203ENST00000358544 SPATA32Q96LK8 384 aa7.17□□□□□ -1.26
VPS13B-203ENST00000358544 PLEKHH2Q8IVE3 1493 aa7.17□□□□□ -1.26
VPS13B-203ENST00000358544 RIPK4P57078 832 aa7.17□□□□□ -1.26
VPS13B-203ENST00000358544 CAMK4Q16566 473 aa7.17□□□□□ -1.26
VPS13B-203ENST00000358544 SMARCE1Q969G3 411 aa7.17□□□□□ -1.26
VPS13B-203ENST00000358544 FMNL2Q96PY5 1086 aa7.17□□□□□ -1.26
VPS13B-203ENST00000358544 STK38Q15208 465 aa7.17□□□□□ -1.26
VPS13B-203ENST00000358544 CHD1LQ86WJ1 897 aa7.17□□□□□ -1.26
VPS13B-203ENST00000358544 ZSCAN31Q96LW9 406 aaPredicted RBP7.17□□□□□ -1.26
VPS13B-203ENST00000358544 ELL2O00472 640 aaPredicted RBP7.17□□□□□ -1.26
VPS13B-203ENST00000358544 UTP14CQ5TAP6 766 aaKnown RBP7.17□□□□□ -1.26
VPS13B-203ENST00000358544 RNF187Q5TA31 235 aaPredicted RBP7.17□□□□□ -1.26
VPS13B-203ENST00000358544 SERPINC1P01008 464 aa7.17□□□□□ -1.26
VPS13B-203ENST00000358544 A0A0G2JS52 829 aa7.17□□□□□ -1.26
VPS13B-203ENST00000358544 TCP11L2Q8N4U5 519 aa7.17□□□□□ -1.26
VPS13B-203ENST00000358544 CCDC171Q6TFL3 1326 aa7.17□□□□□ -1.26
VPS13B-203ENST00000358544 ABCA1O95477 2261 aa7.17□□□□□ -1.26
VPS13B-203ENST00000358544 A0A1B0GUL7 405 aa7.17□□□□□ -1.26
VPS13B-203ENST00000358544 RUSC2Q8N2Y8 1516 aa7.17□□□□□ -1.26
VPS13B-203ENST00000358544 TRIM29Q14134 588 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms