RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 CDCA7LQ96GN5 454 aa10.42□□□□□ -0.74
COL6A6-201ENST00000358511 GNAI1P63096 354 aa10.42□□□□□ -0.74
COL6A6-201ENST00000358511 FILIP1LQ4L180 1135 aa10.42□□□□□ -0.74
COL6A6-201ENST00000358511 DCAF8L1A6NGE4 600 aa10.42□□□□□ -0.74
COL6A6-201ENST00000358511 ADAMTS8Q9UP79 889 aa10.42□□□□□ -0.74
COL6A6-201ENST00000358511 XPCQ01831 940 aaPredicted RBP10.41□□□□□ -0.74
COL6A6-201ENST00000358511 NEXNQ0ZGT2 675 aa10.41□□□□□ -0.74
COL6A6-201ENST00000358511 CBFA2T2O43439 604 aa10.41□□□□□ -0.74
COL6A6-201ENST00000358511 PLCD4Q9BRC7 762 aa10.41□□□□□ -0.74
COL6A6-201ENST00000358511 POLA1P09884 1462 aaPredicted RBP10.41□□□□□ -0.74
COL6A6-201ENST00000358511 EPS15P42566 896 aa10.41□□□□□ -0.74
COL6A6-201ENST00000358511 PIP4K2AP48426 406 aaPredicted RBP10.41□□□□□ -0.74
COL6A6-201ENST00000358511 CCDC102AQ96A19 550 aa10.41□□□□□ -0.74
COL6A6-201ENST00000358511 ERLIN2O94905 339 aa10.41□□□□□ -0.74
COL6A6-201ENST00000358511 SERPINC1P01008 464 aa10.41□□□□□ -0.74
COL6A6-201ENST00000358511 MEX3CQ5U5Q3 659 aaKnown RBP10.41□□□□□ -0.74
COL6A6-201ENST00000358511 TXLNBQ8N3L3 684 aa10.41□□□□□ -0.74
COL6A6-201ENST00000358511 TCEAL9Q9UHQ7 104 aa10.41□□□□□ -0.74
COL6A6-201ENST00000358511 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.4□□□□□ -0.74
COL6A6-201ENST00000358511 PNISRQ8TF01 805 aaKnown RBP10.4□□□□□ -0.74
COL6A6-201ENST00000358511 NBPF1Q3BBV0 1214 aa10.4□□□□□ -0.74
COL6A6-201ENST00000358511 PTPN14Q15678 1187 aa10.4□□□□□ -0.74
COL6A6-201ENST00000358511 BBXQ8WY36 941 aaPredicted RBP10.4□□□□□ -0.74
COL6A6-201ENST00000358511 PLEKHH1Q9ULM0 1364 aa10.4□□□□□ -0.74
COL6A6-201ENST00000358511 C11orf95C9JLR9 678 aaPredicted RBP10.4□□□□□ -0.74
COL6A6-201ENST00000358511 JMYQ8N9B5 988 aa10.4□□□□□ -0.74
COL6A6-201ENST00000358511 ZNF330Q9Y3S2 320 aaPredicted RBP10.4□□□□□ -0.74
COL6A6-201ENST00000358511 EHBP1L1Q8N3D4 1523 aa10.4□□□□□ -0.74
COL6A6-201ENST00000358511 HIP1O00291 1037 aa10.4□□□□□ -0.75
COL6A6-201ENST00000358511 ANKRD1Q15327 319 aa10.4□□□□□ -0.75
COL6A6-201ENST00000358511 FMNL2Q96PY5 1086 aa10.4□□□□□ -0.75
COL6A6-201ENST00000358511 NKTRP30414 1462 aaKnown RBP10.4□□□□□ -0.75
COL6A6-201ENST00000358511 DIAPH1O60610 1272 aaKnown RBP10.4□□□□□ -0.75
COL6A6-201ENST00000358511 AMPHP49418 695 aa10.4□□□□□ -0.75
COL6A6-201ENST00000358511 FOSBP53539 338 aa10.4□□□□□ -0.75
COL6A6-201ENST00000358511 GBP3Q9H0R5 595 aa10.39□□□□□ -0.75
COL6A6-201ENST00000358511 SHTN1A0MZ66 631 aa10.39□□□□□ -0.75
COL6A6-201ENST00000358511 MAP9Q49MG5 647 aa10.39□□□□□ -0.75
COL6A6-201ENST00000358511 DHX16O60231 1041 aaKnown RBP10.39□□□□□ -0.75
COL6A6-201ENST00000358511 NFXL1Q6ZNB6 911 aa10.39□□□□□ -0.75
COL6A6-201ENST00000358511 CEP57L1Q8IYX8 460 aa10.39□□□□□ -0.75
COL6A6-201ENST00000358511 PAF1Q8N7H5 531 aa10.39□□□□□ -0.75
COL6A6-201ENST00000358511 MPNDQ8N594 471 aa10.39□□□□□ -0.75
COL6A6-201ENST00000358511 CCDC183Q5T5S1 534 aa10.39□□□□□ -0.75
COL6A6-201ENST00000358511 RALYLQ86SE5 291 aaKnown RBP10.39□□□□□ -0.75
COL6A6-201ENST00000358511 GTPBP4Q9BZE4 634 aaKnown RBP10.39□□□□□ -0.75
COL6A6-201ENST00000358511 NUP62CLQ9H1M0 184 aa10.39□□□□□ -0.75
COL6A6-201ENST00000358511 BRMS1Q9HCU9 246 aa10.39□□□□□ -0.75
COL6A6-201ENST00000358511 PPFIBP1Q86W92 1011 aa10.39□□□□□ -0.75
COL6A6-201ENST00000358511 ZNHIT6Q9NWK9 470 aaKnown RBP10.39□□□□□ -0.75
COL6A6-201ENST00000358511 LUC7LQ9NQ29 371 aaKnown RBP10.39□□□□□ -0.75
COL6A6-201ENST00000358511 WDR70Q9NW82 654 aa10.39□□□□□ -0.75
COL6A6-201ENST00000358511 G3BP1Q13283 466 aaKnown RBP eCLIP10.38□□□□□ -0.75
COL6A6-201ENST00000358511 FKBP5Q13451 457 aaPredicted RBP10.38□□□□□ -0.75
COL6A6-201ENST00000358511 MAP3K11Q16584 847 aa10.38□□□□□ -0.75
COL6A6-201ENST00000358511 MCM3P25205 808 aa10.38□□□□□ -0.75
COL6A6-201ENST00000358511 FILIP1Q7Z7B0 1213 aa10.38□□□□□ -0.75
COL6A6-201ENST00000358511 COG3Q96JB2 828 aa10.38□□□□□ -0.75
COL6A6-201ENST00000358511 ERICH2A1L162 156 aa10.38□□□□□ -0.75
COL6A6-201ENST00000358511 DACH1Q9UI36 760 aa10.38□□□□□ -0.75
COL6A6-201ENST00000358511 CFAP45Q9UL16 551 aa10.38□□□□□ -0.75
COL6A6-201ENST00000358511 OFD1O75665 1012 aa10.38□□□□□ -0.75
COL6A6-201ENST00000358511 CENPHQ9H3R5 247 aa10.37□□□□□ -0.75
COL6A6-201ENST00000358511 HECW1Q76N89 1606 aa10.37□□□□□ -0.75
COL6A6-201ENST00000358511 MVPQ14764 893 aaKnown RBP10.37□□□□□ -0.75
COL6A6-201ENST00000358511 CT47A1Q5JQC4 288 aaPredicted RBP10.37□□□□□ -0.75
COL6A6-201ENST00000358511 NCOA2Q15596 1464 aa10.37□□□□□ -0.75
COL6A6-201ENST00000358511 EFCAB5A4FU69 1503 aa10.37□□□□□ -0.75
COL6A6-201ENST00000358511 SFPQP23246 707 aaKnown RBP eCLIP10.37□□□□□ -0.75
COL6A6-201ENST00000358511 PPM1FP49593 454 aaPredicted RBP10.37□□□□□ -0.75
COL6A6-201ENST00000358511 NOL10Q9BSC4 688 aaKnown RBP10.37□□□□□ -0.75
COL6A6-201ENST00000358511 IRX3P78415 501 aaPredicted RBP10.37□□□□□ -0.75
COL6A6-201ENST00000358511 ODF2Q5BJF6 829 aa10.37□□□□□ -0.75
COL6A6-201ENST00000358511 XBP1P17861 261 aa10.37□□□□□ -0.75
COL6A6-201ENST00000358511 CRACR2AQ9BSW2 395 aa10.37□□□□□ -0.75
COL6A6-201ENST00000358511 TRAK1Q9UPV9 953 aa10.37□□□□□ -0.75
COL6A6-201ENST00000358511 FAM177A1Q8N128 213 aaPredicted RBP10.37□□□□□ -0.75
COL6A6-201ENST00000358511 KRT222Q8N1A0 295 aa10.37□□□□□ -0.75
COL6A6-201ENST00000358511 CCDC9Q9Y3X0 531 aaKnown RBP10.37□□□□□ -0.75
COL6A6-201ENST00000358511 CHD1LQ86WJ1 897 aa10.36□□□□□ -0.75
COL6A6-201ENST00000358511 NEFHP12036 1026 aa10.36□□□□□ -0.75
COL6A6-201ENST00000358511 ME1P48163 572 aa10.36□□□□□ -0.75
COL6A6-201ENST00000358511 MAGEC2Q9UBF1 373 aaPredicted RBP10.36□□□□□ -0.75
COL6A6-201ENST00000358511 CCDC94Q9BW85 323 aaPredicted RBP10.36□□□□□ -0.75
COL6A6-201ENST00000358511 PAXBP1Q9Y5B6 917 aa10.36□□□□□ -0.75
COL6A6-201ENST00000358511 HFM1A2PYH4 1435 aa10.36□□□□□ -0.75
COL6A6-201ENST00000358511 HSP90AB2PQ58FF8 381 aa10.36□□□□□ -0.75
COL6A6-201ENST00000358511 CCDC181Q5TID7 509 aa10.36□□□□□ -0.75
COL6A6-201ENST00000358511 CASKIN1Q8WXD9 1431 aa10.36□□□□□ -0.75
COL6A6-201ENST00000358511 EFCAB2Q5VUJ9 269 aa10.36□□□□□ -0.75
COL6A6-201ENST00000358511 GGT6Q6P531 493 aa10.36□□□□□ -0.75
COL6A6-201ENST00000358511 GPATCH11Q8N954 259 aa10.36□□□□□ -0.75
COL6A6-201ENST00000358511 SPATA32Q96LK8 384 aa10.36□□□□□ -0.75
COL6A6-201ENST00000358511 C16orf45Q96MC5 204 aaPredicted RBP10.36□□□□□ -0.75
COL6A6-201ENST00000358511 CYP46A1Q9Y6A2 500 aa10.36□□□□□ -0.75
COL6A6-201ENST00000358511 NEMFO60524 1076 aa10.35□□□□□ -0.75
COL6A6-201ENST00000358511 HNRNPMP52272 730 aaKnown RBP eCLIP10.35□□□□□ -0.75
COL6A6-201ENST00000358511 STK38Q15208 465 aa10.35□□□□□ -0.75
COL6A6-201ENST00000358511 ZSCAN12O43309 604 aa10.35□□□□□ -0.75
COL6A6-201ENST00000358511 FAM193AP78312 1265 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms