RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 C19orf44Q9H6X5 657 aa12.15□□□□□ -0.46
SMARCAL1-202ENST00000358207 ITSN1Q15811 1721 aa12.15□□□□□ -0.46
SMARCAL1-202ENST00000358207 POGKQ9P215 609 aa12.14□□□□□ -0.47
SMARCAL1-202ENST00000358207 RGS17Q9UGC6 210 aaPredicted RBP12.14□□□□□ -0.47
SMARCAL1-202ENST00000358207 PXDNQ92626 1479 aa12.14□□□□□ -0.47
SMARCAL1-202ENST00000358207 TOPAZ1Q8N9V7 1692 aa12.14□□□□□ -0.47
SMARCAL1-202ENST00000358207 HSPA5P11021 654 aaKnown RBP12.14□□□□□ -0.47
SMARCAL1-202ENST00000358207 PROSER2Q86WR7 435 aaPredicted RBP12.14□□□□□ -0.47
SMARCAL1-202ENST00000358207 ZBED9Q6R2W3 1325 aa12.13□□□□□ -0.47
SMARCAL1-202ENST00000358207 TCERG1O14776 1098 aaKnown RBP12.13□□□□□ -0.47
SMARCAL1-202ENST00000358207 STAG3Q9UJ98 1225 aa12.13□□□□□ -0.47
SMARCAL1-202ENST00000358207 RNF123Q5XPI4 1314 aa12.13□□□□□ -0.47
SMARCAL1-202ENST00000358207 C1orf167Q5SNV9 1468 aa12.13□□□□□ -0.47
SMARCAL1-202ENST00000358207 NUTM2DQ5VT03 806 aaPredicted RBP12.13□□□□□ -0.47
SMARCAL1-202ENST00000358207 METP08581 1390 aa12.13□□□□□ -0.47
SMARCAL1-202ENST00000358207 SLAIN2Q9P270 581 aa12.12□□□□□ -0.47
SMARCAL1-202ENST00000358207 ALS2Q96Q42 1657 aa12.12□□□□□ -0.47
SMARCAL1-202ENST00000358207 DDRGK1Q96HY6 314 aa12.12□□□□□ -0.47
SMARCAL1-202ENST00000358207 USP32Q8NFA0 1604 aa12.12□□□□□ -0.47
SMARCAL1-202ENST00000358207 ADGRB1O14514 1584 aa12.11□□□□□ -0.47
SMARCAL1-202ENST00000358207 NRAPQ86VF7 1730 aa12.11□□□□□ -0.47
SMARCAL1-202ENST00000358207 LRPPRCP42704 1394 aaKnown RBP12.1□□□□□ -0.47
SMARCAL1-202ENST00000358207 ARHGEF28Q8N1W1 1705 aaKnown RBP12.1□□□□□ -0.47
SMARCAL1-202ENST00000358207 ABCC11Q96J66 1382 aa12.1□□□□□ -0.47
SMARCAL1-202ENST00000358207 PIP4K2BP78356 416 aa12.09□□□□□ -0.47
SMARCAL1-202ENST00000358207 FAM9BQ8IZU0 186 aa12.09□□□□□ -0.47
SMARCAL1-202ENST00000358207 ZHX1Q9UKY1 873 aaPredicted RBP12.09□□□□□ -0.47
SMARCAL1-202ENST00000358207 PNPLA6Q8IY17 1366 aa12.09□□□□□ -0.47
SMARCAL1-202ENST00000358207 IPO4Q8TEX9 1081 aaKnown RBP12.08□□□□□ -0.48
SMARCAL1-202ENST00000358207 SLC26A8Q96RN1 970 aa12.08□□□□□ -0.48
SMARCAL1-202ENST00000358207 PLCH1Q4KWH8 1693 aa12.08□□□□□ -0.48
SMARCAL1-202ENST00000358207 ANKARQ7Z5J8 1434 aa12.07□□□□□ -0.48
SMARCAL1-202ENST00000358207 XRCC6P12956 609 aaKnown RBP eCLIP12.07□□□□□ -0.48
SMARCAL1-202ENST00000358207 CANXP27824 592 aaKnown RBP12.07□□□□□ -0.48
SMARCAL1-202ENST00000358207 NBPF1Q3BBV0 1214 aa12.07□□□□□ -0.48
SMARCAL1-202ENST00000358207 EIF4G2P78344 907 aaKnown RBP eCLIP12.07□□□□□ -0.48
SMARCAL1-202ENST00000358207 USP54Q70EL1 1684 aa12.06□□□□□ -0.48
SMARCAL1-202ENST00000358207 PANK2Q9BZ23 570 aa12.06□□□□□ -0.48
SMARCAL1-202ENST00000358207 AMOTL2Q9Y2J4 779 aa12.06□□□□□ -0.48
SMARCAL1-202ENST00000358207 SOS2Q07890 1332 aaPredicted RBP12.06□□□□□ -0.48
SMARCAL1-202ENST00000358207 SENP3-EIF4A1A0A087X0R7 540 aa12.06□□□□□ -0.48
SMARCAL1-202ENST00000358207 VGFO15240 615 aaPredicted RBP12.06□□□□□ -0.48
SMARCAL1-202ENST00000358207 MS4A1P11836 297 aa12.06□□□□□ -0.48
SMARCAL1-202ENST00000358207 CCDC144AA2RUR9 1427 aa12.06□□□□□ -0.48
SMARCAL1-202ENST00000358207 BRINP3Q76B58 766 aa12.05□□□□□ -0.48
SMARCAL1-202ENST00000358207 CARD11Q9BXL7 1154 aa12.05□□□□□ -0.48
SMARCAL1-202ENST00000358207 SMG6Q86US8 1419 aaKnown RBP12.05□□□□□ -0.48
SMARCAL1-202ENST00000358207 L1TD1Q5T7N2 865 aaKnown RBP12.05□□□□□ -0.48
SMARCAL1-202ENST00000358207 SKAP1Q86WV1 359 aa12.05□□□□□ -0.48
SMARCAL1-202ENST00000358207 RGPD8O14715 1765 aaPredicted RBP12.05□□□□□ -0.48
SMARCAL1-202ENST00000358207 ROBO2Q9HCK4 1378 aa12.05□□□□□ -0.48
SMARCAL1-202ENST00000358207 ERBB4Q15303 1308 aa12.05□□□□□ -0.48
SMARCAL1-202ENST00000358207 TPM2P07951 284 aa12.05□□□□□ -0.48
SMARCAL1-202ENST00000358207 ATRNO75882 1429 aa12.04□□□□□ -0.48
SMARCAL1-202ENST00000358207 ARXQ96QS3 562 aa12.04□□□□□ -0.48
SMARCAL1-202ENST00000358207 COL14A1Q05707 1796 aaKnown RBP12.02□□□□□ -0.49
SMARCAL1-202ENST00000358207 ZNF772Q68DY9 489 aaPredicted RBP12.02□□□□□ -0.49
SMARCAL1-202ENST00000358207 ZNF830Q96NB3 372 aaPredicted RBP12.02□□□□□ -0.49
SMARCAL1-202ENST00000358207 TMEM51Q9NW97 253 aa12.01□□□□□ -0.49
SMARCAL1-202ENST00000358207 PHRF1Q9P1Y6 1649 aaKnown RBP12.01□□□□□ -0.49
SMARCAL1-202ENST00000358207 ATF3P18847 181 aa12.01□□□□□ -0.49
SMARCAL1-202ENST00000358207 SMAP1Q8IYB5 467 aaPredicted RBP12.01□□□□□ -0.49
SMARCAL1-202ENST00000358207 NUDCQ9Y266 331 aa12.01□□□□□ -0.49
SMARCAL1-202ENST00000358207 YTHDC2Q9H6S0 1430 aaKnown RBP12.01□□□□□ -0.49
SMARCAL1-202ENST00000358207 ST20-MTHFSA0A0A6YYL1 179 aa12□□□□□ -0.49
SMARCAL1-202ENST00000358207 TULP4Q9NRJ4 1543 aa12□□□□□ -0.49
SMARCAL1-202ENST00000358207 PLCD3Q8N3E9 789 aa12□□□□□ -0.49
SMARCAL1-202ENST00000358207 RIPK4P57078 832 aa12□□□□□ -0.49
SMARCAL1-202ENST00000358207 PHF23Q9BUL5 403 aaPredicted RBP12□□□□□ -0.49
SMARCAL1-202ENST00000358207 RGPD3A6NKT7 1758 aaPredicted RBP11.99□□□□□ -0.49
SMARCAL1-202ENST00000358207 RGPD4Q7Z3J3 1758 aa11.99□□□□□ -0.49
SMARCAL1-202ENST00000358207 EXOC6Q8TAG9 804 aa11.99□□□□□ -0.49
SMARCAL1-202ENST00000358207 PRDM10Q9NQV6 1147 aa11.99□□□□□ -0.49
SMARCAL1-202ENST00000358207 WNK3Q9BYP7 1800 aa11.99□□□□□ -0.49
SMARCAL1-202ENST00000358207 SBNO1A3KN83 1393 aa11.99□□□□□ -0.49
SMARCAL1-202ENST00000358207 SLIT2O94813 1529 aa11.99□□□□□ -0.49
SMARCAL1-202ENST00000358207 THSD7AQ9UPZ6 1657 aa11.99□□□□□ -0.49
SMARCAL1-202ENST00000358207 EIF3AQ14152 1382 aaKnown RBP11.98□□□□□ -0.49
SMARCAL1-202ENST00000358207 ESPNB1AK53 854 aa11.98□□□□□ -0.49
SMARCAL1-202ENST00000358207 POTEAQ6S8J7 498 aa11.98□□□□□ -0.49
SMARCAL1-202ENST00000358207 MRS2Q9HD23 443 aa11.98□□□□□ -0.49
SMARCAL1-202ENST00000358207 LRP5O75197 1615 aa11.98□□□□□ -0.49
SMARCAL1-202ENST00000358207 FSD2A1L4K1 749 aa11.97□□□□□ -0.49
SMARCAL1-202ENST00000358207 VGLL3A8MV65 326 aa11.97□□□□□ -0.49
SMARCAL1-202ENST00000358207 ROCK2O75116 1388 aaKnown RBP11.97□□□□□ -0.49
SMARCAL1-202ENST00000358207 LRRC59Q96AG4 307 aaKnown RBP11.97□□□□□ -0.49
SMARCAL1-202ENST00000358207 GLI3P10071 1580 aa11.97□□□□□ -0.49
SMARCAL1-202ENST00000358207 RGS12O14924 1447 aa11.97□□□□□ -0.49
SMARCAL1-202ENST00000358207 RGPD1P0DJD0 1748 aa11.97□□□□□ -0.49
SMARCAL1-202ENST00000358207 USP47Q96K76 1375 aa11.97□□□□□ -0.49
SMARCAL1-202ENST00000358207 KIAA1211Q6ZU35 1233 aa11.96□□□□□ -0.49
SMARCAL1-202ENST00000358207 BRWD3Q6RI45 1802 aa11.96□□□□□ -0.5
SMARCAL1-202ENST00000358207 ABCC6O95255 1503 aa11.95□□□□□ -0.5
SMARCAL1-202ENST00000358207 ATP7BP35670 1465 aa11.95□□□□□ -0.5
SMARCAL1-202ENST00000358207 DHX37Q8IY37 1157 aaKnown RBP11.95□□□□□ -0.5
SMARCAL1-202ENST00000358207 PRKRIP1Q9H875 184 aaPredicted RBP11.94□□□□□ -0.5
SMARCAL1-202ENST00000358207 C14orf93Q9H972 538 aaKnown RBP11.94□□□□□ -0.5
SMARCAL1-202ENST00000358207 SAFB2Q14151 953 aaKnown RBP eCLIP11.94□□□□□ -0.5
SMARCAL1-202ENST00000358207 CFAP70Q5T0N1 1121 aa11.94□□□□□ -0.5
SMARCAL1-202ENST00000358207 FNBP4Q8N3X1 1017 aaPredicted RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms