RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 TMPOP42166 694 aaKnown RBP22.42■■□□□ 1.18
RTN4-204ENST00000357732 IDI1Q13907 227 aa22.41■■□□□ 1.18
RTN4-204ENST00000357732 SLKQ9H2G2 1235 aaPredicted RBP22.41■■□□□ 1.18
RTN4-204ENST00000357732 SMC4Q9NTJ3 1288 aa22.41■■□□□ 1.18
RTN4-204ENST00000357732 KIF16BQ96L93 1317 aa22.41■■□□□ 1.18
RTN4-204ENST00000357732 ATF7IPQ6VMQ6 1270 aa22.41■■□□□ 1.18
RTN4-204ENST00000357732 DIP2CQ9Y2E4 1556 aa22.41■■□□□ 1.18
RTN4-204ENST00000357732 CDC42BPGQ6DT37 1551 aa22.4■■□□□ 1.18
RTN4-204ENST00000357732 SMC5Q8IY18 1101 aa22.4■■□□□ 1.18
RTN4-204ENST00000357732 NEO1Q92859 1461 aa22.4■■□□□ 1.18
RTN4-204ENST00000357732 TRIM27P14373 513 aa22.39■■□□□ 1.18
RTN4-204ENST00000357732 ZNF428Q96B54 188 aa22.39■■□□□ 1.18
RTN4-204ENST00000357732 ANO8Q9HCE9 1232 aaPredicted RBP22.39■■□□□ 1.18
RTN4-204ENST00000357732 IPO8O15397 1037 aaKnown RBP22.39■■□□□ 1.17
RTN4-204ENST00000357732 TERF2IPQ9NYB0 399 aa22.39■■□□□ 1.17
RTN4-204ENST00000357732 STK26Q9P289 416 aa22.39■■□□□ 1.17
RTN4-204ENST00000357732 C22orf23Q9BZE7 217 aa22.38■■□□□ 1.17
RTN4-204ENST00000357732 POGKQ9P215 609 aa22.38■■□□□ 1.17
RTN4-204ENST00000357732 TRIM35Q9UPQ4 493 aa22.38■■□□□ 1.17
RTN4-204ENST00000357732 PNPLA6Q8IY17 1366 aa22.38■■□□□ 1.17
RTN4-204ENST00000357732 EXOSC9Q06265 439 aaKnown RBP22.38■■□□□ 1.17
RTN4-204ENST00000357732 SLC52A1Q9NWF4 448 aa22.38■■□□□ 1.17
RTN4-204ENST00000357732 ALDH1L2Q3SY69 923 aa22.37■■□□□ 1.17
RTN4-204ENST00000357732 CHMP5Q9NZZ3 219 aa22.36■■□□□ 1.17
RTN4-204ENST00000357732 PTPRMP28827 1452 aa22.36■■□□□ 1.17
RTN4-204ENST00000357732 BRPF1P55201 1214 aaPredicted RBP22.35■■□□□ 1.17
RTN4-204ENST00000357732 SSH1Q8WYL5 1049 aa22.35■■□□□ 1.17
RTN4-204ENST00000357732 TSR2Q969E8 191 aaKnown RBP22.35■■□□□ 1.17
RTN4-204ENST00000357732 PPIP5K1Q6PFW1 1433 aa22.35■■□□□ 1.17
RTN4-204ENST00000357732 SRPK2P78362 688 aaKnown RBP22.34■■□□□ 1.17
RTN4-204ENST00000357732 CHMP4BQ9H444 224 aaKnown RBP22.34■■□□□ 1.17
RTN4-204ENST00000357732 ITPRIPQ8IWB1 547 aa22.33■■□□□ 1.17
RTN4-204ENST00000357732 ZBTB40Q9NUA8 1239 aa22.33■■□□□ 1.17
RTN4-204ENST00000357732 GGNBP2Q9H3C7 697 aa22.33■■□□□ 1.16
RTN4-204ENST00000357732 YEATS2Q9ULM3 1422 aa22.33■■□□□ 1.16
RTN4-204ENST00000357732 CD163L1Q9NR16 1453 aa22.33■■□□□ 1.16
RTN4-204ENST00000357732 U2SURPO15042 1029 aaKnown RBP22.32■■□□□ 1.16
RTN4-204ENST00000357732 KIF20BQ96Q89 1820 aa22.32■■□□□ 1.16
RTN4-204ENST00000357732 MCM4P33991 863 aa22.32■■□□□ 1.16
RTN4-204ENST00000357732 TMEM131LA2VDJ0 1609 aa22.3■■□□□ 1.16
RTN4-204ENST00000357732 NCOA3Q9Y6Q9 1424 aa22.3■■□□□ 1.16
RTN4-204ENST00000357732 FYB1O15117 783 aa22.3■■□□□ 1.16
RTN4-204ENST00000357732 DIAPH1O60610 1272 aaKnown RBP22.3■■□□□ 1.16
RTN4-204ENST00000357732 NOB1Q9ULX3 412 aaKnown RBP22.3■■□□□ 1.16
RTN4-204ENST00000357732 MINK1Q8N4C8 1332 aaPredicted RBP22.3■■□□□ 1.16
RTN4-204ENST00000357732 RBM25P49756 843 aaKnown RBP22.3■■□□□ 1.16
RTN4-204ENST00000357732 REREQ9P2R6 1566 aa22.29■■□□□ 1.16
RTN4-204ENST00000357732 FCHSD2O94868 740 aa22.29■■□□□ 1.16
RTN4-204ENST00000357732 RICTORQ6R327 1708 aa22.29■■□□□ 1.16
RTN4-204ENST00000357732 RIPK4P57078 832 aa22.28■■□□□ 1.16
RTN4-204ENST00000357732 NUCB1Q02818 461 aa22.28■■□□□ 1.16
RTN4-204ENST00000357732 HSCBQ8IWL3 235 aa22.28■■□□□ 1.16
RTN4-204ENST00000357732 SNX21Q969T3 373 aa22.28■■□□□ 1.16
RTN4-204ENST00000357732 RSPH6AQ9H0K4 717 aa22.28■■□□□ 1.16
RTN4-204ENST00000357732 HDGFL2Q7Z4V5 671 aaPredicted RBP22.28■■□□□ 1.16
RTN4-204ENST00000357732 ISY1Q9ULR0 285 aaKnown RBP22.28■■□□□ 1.16
RTN4-204ENST00000357732 FSD2A1L4K1 749 aa22.27■■□□□ 1.16
RTN4-204ENST00000357732 MFAP1P55081 439 aaKnown RBP22.27■■□□□ 1.16
RTN4-204ENST00000357732 TMEM57Q8N5G2 664 aa22.27■■□□□ 1.16
RTN4-204ENST00000357732 PRAM1Q96QH2 718 aa22.27■■□□□ 1.16
RTN4-204ENST00000357732 YTHDC2Q9H6S0 1430 aaKnown RBP22.27■■□□□ 1.16
RTN4-204ENST00000357732 PREX1Q8TCU6 1659 aa22.27■■□□□ 1.16
RTN4-204ENST00000357732 MYO5BQ9ULV0 1848 aa22.27■■□□□ 1.16
RTN4-204ENST00000357732 DDX11L8A8MPP1 907 aa22.26■■□□□ 1.15
RTN4-204ENST00000357732 CALD1Q05682 793 aaKnown RBP22.26■■□□□ 1.15
RTN4-204ENST00000357732 FAM135BQ49AJ0 1406 aa22.25■■□□□ 1.15
RTN4-204ENST00000357732 GOLGA6L3A6NEY3 463 aa22.25■■□□□ 1.15
RTN4-204ENST00000357732 ARHGAP45Q92619 1136 aa22.25■■□□□ 1.15
RTN4-204ENST00000357732 PIK3R4Q99570 1358 aa22.25■■□□□ 1.15
RTN4-204ENST00000357732 ARHGEF40Q8TER5 1519 aa22.24■■□□□ 1.15
RTN4-204ENST00000357732 LRRC7Q96NW7 1537 aa22.24■■□□□ 1.15
RTN4-204ENST00000357732 CIZ1Q9ULV3 898 aaPredicted RBP22.24■■□□□ 1.15
RTN4-204ENST00000357732 EIF5BO60841 1220 aaKnown RBP22.24■■□□□ 1.15
RTN4-204ENST00000357732 ATP7BP35670 1465 aa22.23■■□□□ 1.15
RTN4-204ENST00000357732 BMP2KLQ5H9B9 411 aa22.23■■□□□ 1.15
RTN4-204ENST00000357732 FBXO31Q5XUX0 539 aaPredicted RBP22.23■■□□□ 1.15
RTN4-204ENST00000357732 GCC1Q96CN9 775 aa22.23■■□□□ 1.15
RTN4-204ENST00000357732 DLC1Q96QB1 1528 aa22.22■■□□□ 1.15
RTN4-204ENST00000357732 PTCH1Q13635 1447 aa22.22■■□□□ 1.15
RTN4-204ENST00000357732 DDIT3P35638 169 aa22.21■■□□□ 1.15
RTN4-204ENST00000357732 CHD1LQ86WJ1 897 aa22.21■■□□□ 1.15
RTN4-204ENST00000357732 PTMSP20962 102 aa22.21■■□□□ 1.15
RTN4-204ENST00000357732 ZNF692Q9BU19 519 aaPredicted RBP22.2■■□□□ 1.14
RTN4-204ENST00000357732 ALKQ9UM73 1620 aa22.2■■□□□ 1.14
RTN4-204ENST00000357732 TRAK2O60296 914 aa22.19■■□□□ 1.14
RTN4-204ENST00000357732 CDK19Q9BWU1 502 aa22.18■■□□□ 1.14
RTN4-204ENST00000357732 MRE11P49959 708 aa22.17■■□□□ 1.14
RTN4-204ENST00000357732 CFAP44Q96MT7 982 aa22.17■■□□□ 1.14
RTN4-204ENST00000357732 XRCC6P12956 609 aaKnown RBP eCLIP22.16■■□□□ 1.14
RTN4-204ENST00000357732 CABP1Q9NZU7 370 aa22.16■■□□□ 1.14
RTN4-204ENST00000357732 NFE2L2Q16236 605 aa22.15■■□□□ 1.14
RTN4-204ENST00000357732 KIF24Q5T7B8 1368 aa22.15■■□□□ 1.14
RTN4-204ENST00000357732 ZBTB7BO15156 539 aaPredicted RBP22.14■■□□□ 1.14
RTN4-204ENST00000357732 IFT57Q9NWB7 429 aa22.14■■□□□ 1.14
RTN4-204ENST00000357732 GNAI1P63096 354 aa22.14■■□□□ 1.13
RTN4-204ENST00000357732 GBP4Q96PP9 640 aa22.13■■□□□ 1.13
RTN4-204ENST00000357732 LNPKQ9C0E8 428 aa22.13■■□□□ 1.13
RTN4-204ENST00000357732 STAG3Q9UJ98 1225 aa22.13■■□□□ 1.13
RTN4-204ENST00000357732 CDK12Q9NYV4 1490 aaPredicted RBP22.13■■□□□ 1.13
RTN4-204ENST00000357732 PRKAR2BP31323 418 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms