RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 TSPYL4Q9UJ04 414 aa6.92□□□□□ -1.3
BRCA1-203ENST00000357654 CLIP1P30622 1438 aa6.92□□□□□ -1.3
BRCA1-203ENST00000357654 ZWINTO95229 277 aa6.91□□□□□ -1.3
BRCA1-203ENST00000357654 RNF20Q5VTR2 975 aa6.91□□□□□ -1.3
BRCA1-203ENST00000357654 FERMT2Q96AC1 680 aa6.91□□□□□ -1.3
BRCA1-203ENST00000357654 UBA5Q9GZZ9 404 aa6.91□□□□□ -1.3
BRCA1-203ENST00000357654 TAF12Q16514 161 aa6.91□□□□□ -1.3
BRCA1-203ENST00000357654 NOM1Q5C9Z4 860 aaKnown RBP6.91□□□□□ -1.3
BRCA1-203ENST00000357654 PROSER2Q86WR7 435 aaPredicted RBP6.91□□□□□ -1.3
BRCA1-203ENST00000357654 DDX49Q9Y6V7 483 aaKnown RBP6.91□□□□□ -1.3
BRCA1-203ENST00000357654 DEKP35659 375 aaKnown RBP6.91□□□□□ -1.3
BRCA1-203ENST00000357654 SLC4A8Q2Y0W8 1093 aa6.91□□□□□ -1.3
BRCA1-203ENST00000357654 HSP90B2PQ58FF3 399 aa6.91□□□□□ -1.3
BRCA1-203ENST00000357654 MACROD2A1Z1Q3 448 aa6.91□□□□□ -1.3
BRCA1-203ENST00000357654 CSPG5O95196 566 aa6.91□□□□□ -1.3
BRCA1-203ENST00000357654 ATP6V1DQ9Y5K8 247 aa6.91□□□□□ -1.3
BRCA1-203ENST00000357654 ATP2B3Q16720 1220 aa6.91□□□□□ -1.3
BRCA1-203ENST00000357654 CCDC73Q6ZRK6 1079 aa6.91□□□□□ -1.3
BRCA1-203ENST00000357654 OTUD6BQ8N6M0 293 aa6.91□□□□□ -1.3
BRCA1-203ENST00000357654 CTNNBL1Q8WYA6 563 aaPredicted RBP6.91□□□□□ -1.3
BRCA1-203ENST00000357654 CENPJQ9HC77 1338 aaPredicted RBP6.91□□□□□ -1.3
BRCA1-203ENST00000357654 GOLGA6L10A0A0M3HER8 536 aa6.9□□□□□ -1.3
BRCA1-203ENST00000357654 GOLGA6L10A6NI86 522 aa6.9□□□□□ -1.3
BRCA1-203ENST00000357654 EPB41L2O43491 1005 aaKnown RBP6.9□□□□□ -1.3
BRCA1-203ENST00000357654 KIF20AO95235 890 aa6.9□□□□□ -1.3
BRCA1-203ENST00000357654 HNRNPMP52272 730 aaKnown RBP eCLIP6.9□□□□□ -1.3
BRCA1-203ENST00000357654 ZNF408Q9H9D4 720 aa6.9□□□□□ -1.3
BRCA1-203ENST00000357654 HMOX1P09601 288 aa6.9□□□□□ -1.3
BRCA1-203ENST00000357654 SMC3Q9UQE7 1217 aa6.9□□□□□ -1.3
BRCA1-203ENST00000357654 STAMBPO95630 424 aa6.9□□□□□ -1.31
BRCA1-203ENST00000357654 MYL6BP14649 208 aa6.9□□□□□ -1.31
BRCA1-203ENST00000357654 FSD1Q9BTV5 496 aa6.9□□□□□ -1.31
BRCA1-203ENST00000357654 ZNF622Q969S3 477 aaKnown RBP eCLIP6.9□□□□□ -1.315e-8■■■□□ 17.3
BRCA1-203ENST00000357654 CCDC113Q9H0I3 377 aa6.9□□□□□ -1.31
BRCA1-203ENST00000357654 RAI14Q9P0K7 980 aa6.9□□□□□ -1.31
BRCA1-203ENST00000357654 TNIP1Q15025 636 aa6.89□□□□□ -1.31
BRCA1-203ENST00000357654 NFKBIBQ15653 356 aa6.89□□□□□ -1.31
BRCA1-203ENST00000357654 DZIP1Q86YF9 867 aaKnown RBP6.89□□□□□ -1.31
BRCA1-203ENST00000357654 ACBD3Q9H3P7 528 aa6.89□□□□□ -1.31
BRCA1-203ENST00000357654 ANKIB1Q9P2G1 1089 aa6.89□□□□□ -1.31
BRCA1-203ENST00000357654 EIF3AQ14152 1382 aaKnown RBP6.89□□□□□ -1.31
BRCA1-203ENST00000357654 MPHOSPH8Q99549 860 aa6.89□□□□□ -1.31
BRCA1-203ENST00000357654 CABP4P57796 275 aa6.89□□□□□ -1.31
BRCA1-203ENST00000357654 XPCQ01831 940 aaPredicted RBP6.89□□□□□ -1.31
BRCA1-203ENST00000357654 UBE4AQ14139 1066 aa6.89□□□□□ -1.31
BRCA1-203ENST00000357654 SIL1Q9H173 461 aa6.89□□□□□ -1.31
BRCA1-203ENST00000357654 DHX8Q14562 1220 aaKnown RBP6.89□□□□□ -1.31
BRCA1-203ENST00000357654 PUF60Q9UHX1 559 aaKnown RBP6.89□□□□□ -1.31
BRCA1-203ENST00000357654 RCAN3Q9UKA8 241 aa6.89□□□□□ -1.31
BRCA1-203ENST00000357654 RAD54L2Q9Y4B4 1467 aa6.89□□□□□ -1.31
BRCA1-203ENST00000357654 CCDC69A6NI79 296 aa6.89□□□□□ -1.31
BRCA1-203ENST00000357654 NOP9Q86U38 636 aaKnown RBP6.89□□□□□ -1.31
BRCA1-203ENST00000357654 SIRT1Q96EB6 747 aa6.89□□□□□ -1.31
BRCA1-203ENST00000357654 DZIP1LQ8IYY4 767 aaKnown RBP6.89□□□□□ -1.31
BRCA1-203ENST00000357654 STK3Q13188 491 aa6.88□□□□□ -1.31
BRCA1-203ENST00000357654 APBB1IPQ7Z5R6 666 aaPredicted RBP6.88□□□□□ -1.31
BRCA1-203ENST00000357654 CT47B1P0C2W7 299 aaPredicted RBP6.88□□□□□ -1.31
BRCA1-203ENST00000357654 POTEJP0CG39 1038 aa6.88□□□□□ -1.31
BRCA1-203ENST00000357654 FAM69CQ0P6D2 419 aa6.88□□□□□ -1.31
BRCA1-203ENST00000357654 PROCA1Q8NCQ7 364 aaPredicted RBP6.88□□□□□ -1.31
BRCA1-203ENST00000357654 TMCO5BA8MYB1 307 aa6.88□□□□□ -1.31
BRCA1-203ENST00000357654 DPH6Q7L8W6 267 aa6.88□□□□□ -1.31
BRCA1-203ENST00000357654 ATP2C2O75185 946 aa6.88□□□□□ -1.31
BRCA1-203ENST00000357654 ZPR1O75312 459 aa6.88□□□□□ -1.31
BRCA1-203ENST00000357654 CGNL1Q0VF96 1302 aa6.88□□□□□ -1.31
BRCA1-203ENST00000357654 LMAN1P49257 510 aa6.88□□□□□ -1.31
BRCA1-203ENST00000357654 CPLX3Q8WVH0 158 aa6.88□□□□□ -1.31
BRCA1-203ENST00000357654 SMARCE1Q969G3 411 aa6.88□□□□□ -1.31
BRCA1-203ENST00000357654 FEZ1Q99689 392 aa6.88□□□□□ -1.31
BRCA1-203ENST00000357654 SDF4Q9BRK5 362 aa6.88□□□□□ -1.31
BRCA1-203ENST00000357654 MAP4K4O95819 1239 aaPredicted RBP6.88□□□□□ -1.31
BRCA1-203ENST00000357654 CCDC96Q2M329 555 aa6.88□□□□□ -1.31
BRCA1-203ENST00000357654 FILIP1LQ4L180 1135 aa6.88□□□□□ -1.31
BRCA1-203ENST00000357654 RBM26Q5T8P6 1007 aaKnown RBP6.88□□□□□ -1.31
BRCA1-203ENST00000357654 CCDC150Q8NCX0 1101 aa6.88□□□□□ -1.31
BRCA1-203ENST00000357654 FAM177A1Q8N128 213 aaPredicted RBP6.87□□□□□ -1.31
BRCA1-203ENST00000357654 ABTB2Q8N961 1025 aa6.87□□□□□ -1.31
BRCA1-203ENST00000357654 CCDC158Q5M9N0 1113 aa6.87□□□□□ -1.31
BRCA1-203ENST00000357654 PPP4R4Q6NUP7 873 aa6.87□□□□□ -1.31
BRCA1-203ENST00000357654 CCDC91Q7Z6B0 441 aa6.87□□□□□ -1.31
BRCA1-203ENST00000357654 POLR3DP05423 398 aaPredicted RBP6.87□□□□□ -1.31
BRCA1-203ENST00000357654 PLS1Q14651 629 aa6.87□□□□□ -1.31
BRCA1-203ENST00000357654 ZNHIT6Q9NWK9 470 aaKnown RBP6.87□□□□□ -1.31
BRCA1-203ENST00000357654 FKBP4Q02790 459 aaKnown RBP eCLIP6.87□□□□□ -1.31
BRCA1-203ENST00000357654 GOPCQ9HD26 462 aa6.87□□□□□ -1.31
BRCA1-203ENST00000357654 DNA2P51530 1060 aa6.86□□□□□ -1.31
BRCA1-203ENST00000357654 CCDC175P0C221 793 aa6.86□□□□□ -1.31
BRCA1-203ENST00000357654 CTNNA2P26232 953 aa6.86□□□□□ -1.31
BRCA1-203ENST00000357654 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.86□□□□□ -1.31
BRCA1-203ENST00000357654 TERF1P54274 439 aa6.86□□□□□ -1.31
BRCA1-203ENST00000357654 SPOUT1Q5T280 376 aaKnown RBP6.86□□□□□ -1.31
BRCA1-203ENST00000357654 EFCAB2Q5VUJ9 269 aa6.86□□□□□ -1.31
BRCA1-203ENST00000357654 STK25O00506 426 aa6.86□□□□□ -1.31
BRCA1-203ENST00000357654 TDO2P48775 406 aa6.86□□□□□ -1.31
BRCA1-203ENST00000357654 ERC2O15083 957 aa6.85□□□□□ -1.31
BRCA1-203ENST00000357654 RAB3IL1Q8TBN0 382 aa6.85□□□□□ -1.31
BRCA1-203ENST00000357654 SAMM50Q9Y512 469 aa6.85□□□□□ -1.31
BRCA1-203ENST00000357654 NLRP6P59044 892 aa6.85□□□□□ -1.31
BRCA1-203ENST00000357654 RNF187Q5TA31 235 aaPredicted RBP6.85□□□□□ -1.31
BRCA1-203ENST00000357654 MMRN2Q9H8L6 949 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 256.4 ms