RNA–Protein interactions for RNA: ENST00000357508.5

C1orf228-201, Transcript of Uncharacterized protein C1orf228, humanhuman

TSL 1 (best)

Gene C1orf228, Length 2,113 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf228-201ENST00000357508 CPSF1Q10570 1443 aaKnown RBP34.13■■■■□ 3.05
C1orf228-201ENST00000357508 PPIP5K1Q6PFW1 1433 aa34.13■■■■□ 3.05
C1orf228-201ENST00000357508 NCKAP5LQ9HCH0 1330 aa34.12■■■■□ 3.05
C1orf228-201ENST00000357508 MON2Q7Z3U7 1717 aa34.12■■■■□ 3.05
C1orf228-201ENST00000357508 CDC42BPGQ6DT37 1551 aa34.11■■■■□ 3.05
C1orf228-201ENST00000357508 PHF23Q9BUL5 403 aaPredicted RBP34.11■■■■□ 3.05
C1orf228-201ENST00000357508 AKAP12Q02952 1782 aa34.11■■■■□ 3.05
C1orf228-201ENST00000357508 NPHP4O75161 1426 aaPredicted RBP34.1■■■■□ 3.05
C1orf228-201ENST00000357508 ITSN1Q15811 1721 aa34.09■■■■□ 3.05
C1orf228-201ENST00000357508 U2AF1L5P0DN76 240 aaPredicted RBP34.09■■■■□ 3.05
C1orf228-201ENST00000357508 U2AF1Q01081 240 aaKnown RBP eCLIP34.09■■■■□ 3.05
C1orf228-201ENST00000357508 CRBNQ96SW2 442 aa34.09■■■■□ 3.05
C1orf228-201ENST00000357508 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.08■■■■□ 3.05
C1orf228-201ENST00000357508 RRP7AQ9Y3A4 280 aaKnown RBP34.08■■■■□ 3.05
C1orf228-201ENST00000357508 PIK3R4Q99570 1358 aa34.08■■■■□ 3.05
C1orf228-201ENST00000357508 EDC4Q6P2E9 1401 aaKnown RBP34.07■■■■□ 3.05
C1orf228-201ENST00000357508 MAP2P11137 1827 aaKnown RBP34.06■■■■□ 3.04
C1orf228-201ENST00000357508 NEUROD2Q15784 382 aa34.06■■■■□ 3.04
C1orf228-201ENST00000357508 C20orf194Q5TEA3 1177 aa34.06■■■■□ 3.04
C1orf228-201ENST00000357508 SUGP2Q8IX01 1082 aaKnown RBP eCLIP34.06■■■■□ 3.04
C1orf228-201ENST00000357508 NUDT16Q96DE0 195 aaKnown RBP34.06■■■■□ 3.04
C1orf228-201ENST00000357508 CCDC27Q2M243 656 aa34.05■■■■□ 3.04
C1orf228-201ENST00000357508 NCBP3Q53F19 620 aaKnown RBP34.05■■■■□ 3.04
C1orf228-201ENST00000357508 PNPLA6Q8IY17 1366 aa34.05■■■■□ 3.04
C1orf228-201ENST00000357508 PTCH1Q13635 1447 aa34.04■■■■□ 3.04
C1orf228-201ENST00000357508 XRN1Q8IZH2 1706 aaKnown RBP34.03■■■■□ 3.04
C1orf228-201ENST00000357508 KCNA6P17658 529 aa34.03■■■■□ 3.04
C1orf228-201ENST00000357508 GOLGA6L2Q8N9W4 650 aaPredicted RBP34.03■■■■□ 3.04
C1orf228-201ENST00000357508 HSPA2P54652 639 aa34.01■■■■□ 3.04
C1orf228-201ENST00000357508 WDR63Q8IWG1 891 aa34.01■■■■□ 3.03
C1orf228-201ENST00000357508 CCDC61Q9Y6R9 512 aa34.01■■■■□ 3.03
C1orf228-201ENST00000357508 TOPAZ1Q8N9V7 1692 aa34.01■■■■□ 3.03
C1orf228-201ENST00000357508 U2SURPO15042 1029 aaKnown RBP33.98■■■■□ 3.03
C1orf228-201ENST00000357508 PRR36Q9H6K5 1346 aa33.98■■■■□ 3.03
C1orf228-201ENST00000357508 PLEKHF1Q96S99 279 aa33.97■■■■□ 3.03
C1orf228-201ENST00000357508 DIAPH1O60610 1272 aaKnown RBP33.95■■■■□ 3.03
C1orf228-201ENST00000357508 CHD2O14647 1828 aaKnown RBP33.95■■■■□ 3.03
C1orf228-201ENST00000357508 LMTK3Q96Q04 1460 aa33.95■■■■□ 3.03
C1orf228-201ENST00000357508 POLKQ9UBT6 870 aa33.93■■■■□ 3.02
C1orf228-201ENST00000357508 BCAR3O75815 825 aa33.92■■■■□ 3.02
C1orf228-201ENST00000357508 NME9Q86XW9 330 aa33.92■■■■□ 3.02
C1orf228-201ENST00000357508 NRKQ7Z2Y5 1582 aa33.91■■■■□ 3.02
C1orf228-201ENST00000357508 FBLN1P23142 703 aa33.89■■■■□ 3.02
C1orf228-201ENST00000357508 ZNF692Q9BU19 519 aaPredicted RBP33.88■■■■□ 3.01
C1orf228-201ENST00000357508 LRRC7Q96NW7 1537 aa33.87■■■■□ 3.01
C1orf228-201ENST00000357508 AATKQ6ZMQ8 1374 aa33.87■■■■□ 3.01
C1orf228-201ENST00000357508 TMPOP42166 694 aaKnown RBP33.86■■■■□ 3.01
C1orf228-201ENST00000357508 MAPK8IP3Q9UPT6 1336 aa33.86■■■■□ 3.01
C1orf228-201ENST00000357508 ZRANB1Q9UGI0 708 aa33.86■■■■□ 3.01
C1orf228-201ENST00000357508 CDK12Q9NYV4 1490 aaPredicted RBP33.85■■■■□ 3.01
C1orf228-201ENST00000357508 FANCIQ9NVI1 1328 aa33.84■■■■□ 3.01
C1orf228-201ENST00000357508 PNNQ9H307 717 aaKnown RBP33.83■■■■□ 3.01
C1orf228-201ENST00000357508 MYH16Q9H6N6 1097 aa33.83■■■■□ 3.01
C1orf228-201ENST00000357508 PPM1GO15355 546 aaPredicted RBP33.82■■■■□ 3
C1orf228-201ENST00000357508 RBM33Q96EV2 1170 aaKnown RBP33.82■■■■□ 3
C1orf228-201ENST00000357508 COG3Q96JB2 828 aa33.82■■■■□ 3
C1orf228-201ENST00000357508 NUTM2FA1L443 756 aa33.8■■■■□ 3
C1orf228-201ENST00000357508 TRIM35Q9UPQ4 493 aa33.8■■■■□ 3
C1orf228-201ENST00000357508 EMILIN1Q9Y6C2 1016 aa33.8■■■■□ 3
C1orf228-201ENST00000357508 PLEKHG3A1L390 1219 aa33.79■■■■□ 3
C1orf228-201ENST00000357508 FCHSD2O94868 740 aa33.79■■■■□ 3
C1orf228-201ENST00000357508 RARSP54136 660 aaKnown RBP33.79■■■■□ 3
C1orf228-201ENST00000357508 NWD1Q149M9 1564 aa33.77■■■■□ 3
C1orf228-201ENST00000357508 ACEP12821 1306 aa33.77■■■■□ 3
C1orf228-201ENST00000357508 RGPD8O14715 1765 aaPredicted RBP33.77■■■■□ 3
C1orf228-201ENST00000357508 KDM2BQ8NHM5 1336 aa33.76■■■■□ 3
C1orf228-201ENST00000357508 RSPH6AQ9H0K4 717 aa33.76■■■■□ 3
C1orf228-201ENST00000357508 PDE3AQ14432 1141 aa33.76■■■□□ 2.99
C1orf228-201ENST00000357508 NALCNQ8IZF0 1738 aa33.75■■■□□ 2.99
C1orf228-201ENST00000357508 USP6P35125 1406 aa33.75■■■□□ 2.99
C1orf228-201ENST00000357508 TCERG1O14776 1098 aaKnown RBP33.74■■■□□ 2.99
C1orf228-201ENST00000357508 TTC21BQ7Z4L5 1316 aa33.74■■■□□ 2.99
C1orf228-201ENST00000357508 STRCQ7RTU9 1775 aa33.73■■■□□ 2.99
C1orf228-201ENST00000357508 RIPK4P57078 832 aa33.73■■■□□ 2.99
C1orf228-201ENST00000357508 IL13P35225 146 aa33.72■■■□□ 2.99
C1orf228-201ENST00000357508 IL16Q14005 1332 aa33.72■■■□□ 2.99
C1orf228-201ENST00000357508 PRKAR2BP31323 418 aa33.71■■■□□ 2.99
C1orf228-201ENST00000357508 OVOS2A0A0J9YW53 1432 aa33.71■■■□□ 2.99
C1orf228-201ENST00000357508 OVOS2Q6IE36 1432 aa33.71■■■□□ 2.99
C1orf228-201ENST00000357508 CANXP27824 592 aaKnown RBP33.69■■■□□ 2.98
C1orf228-201ENST00000357508 RRS1Q15050 365 aaKnown RBP33.69■■■□□ 2.98
C1orf228-201ENST00000357508 CENPQQ7L2Z9 268 aaPredicted RBP33.69■■■□□ 2.98
C1orf228-201ENST00000357508 TSR2Q969E8 191 aaKnown RBP33.68■■■□□ 2.98
C1orf228-201ENST00000357508 SSH2Q76I76 1423 aa33.68■■■□□ 2.98
C1orf228-201ENST00000357508 CT47B1P0C2W7 299 aaPredicted RBP33.67■■■□□ 2.98
C1orf228-201ENST00000357508 PROSER2Q86WR7 435 aaPredicted RBP33.67■■■□□ 2.98
C1orf228-201ENST00000357508 ADGRL3Q9HAR2 1447 aa33.67■■■□□ 2.98
C1orf228-201ENST00000357508 FRAT1Q92837 279 aaPredicted RBP33.65■■■□□ 2.98
C1orf228-201ENST00000357508 HMOX1P09601 288 aa33.65■■■□□ 2.98
C1orf228-201ENST00000357508 NEFMP07197 916 aa33.64■■■□□ 2.98
C1orf228-201ENST00000357508 PANK1Q8TE04 598 aa33.64■■■□□ 2.98
C1orf228-201ENST00000357508 DLG5Q8TDM6 1919 aa33.64■■■□□ 2.98
C1orf228-201ENST00000357508 MS4A1P11836 297 aa33.64■■■□□ 2.98
C1orf228-201ENST00000357508 FMN2Q9NZ56 1722 aa33.63■■■□□ 2.97
C1orf228-201ENST00000357508 C14orf37Q86TY3 774 aa33.62■■■□□ 2.97
C1orf228-201ENST00000357508 STRCP1A6NGW2 1772 aa33.62■■■□□ 2.97
C1orf228-201ENST00000357508 BCL2L13Q9BXK5 485 aa33.62■■■□□ 2.97
C1orf228-201ENST00000357508 ANKARQ7Z5J8 1434 aa33.62■■■□□ 2.97
C1orf228-201ENST00000357508 EXOSC9Q06265 439 aaKnown RBP33.61■■■□□ 2.97
C1orf228-201ENST00000357508 PHACTR3Q96KR7 559 aa33.61■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms