RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 MYBBP1AQ9BQG0 1328 aaKnown RBP16.7■□□□□ 0.26
RTFDC1-202ENST00000357348 ITSN1Q15811 1721 aa16.7■□□□□ 0.26
RTFDC1-202ENST00000357348 ZBTB47Q9UFB7 747 aaPredicted RBP16.7■□□□□ 0.26
RTFDC1-202ENST00000357348 CGNL1Q0VF96 1302 aa16.7■□□□□ 0.26
RTFDC1-202ENST00000357348 TOPAZ1Q8N9V7 1692 aa16.69■□□□□ 0.26
RTFDC1-202ENST00000357348 RRP1P56182 461 aaKnown RBP16.69■□□□□ 0.26
RTFDC1-202ENST00000357348 ESCO1Q5FWF5 840 aa16.69■□□□□ 0.26
RTFDC1-202ENST00000357348 NGDNQ8NEJ9 315 aaKnown RBP16.69■□□□□ 0.26
RTFDC1-202ENST00000357348 CDC42BPGQ6DT37 1551 aa16.68■□□□□ 0.26
RTFDC1-202ENST00000357348 TCERG1O14776 1098 aaKnown RBP16.68■□□□□ 0.26
RTFDC1-202ENST00000357348 NBR1Q14596 966 aa16.68■□□□□ 0.26
RTFDC1-202ENST00000357348 C19orf44Q9H6X5 657 aa16.68■□□□□ 0.26
RTFDC1-202ENST00000357348 DMRT2Q9Y5R5 561 aa16.68■□□□□ 0.26
RTFDC1-202ENST00000357348 MORC1Q86VD1 984 aa16.68■□□□□ 0.26
RTFDC1-202ENST00000357348 ORAI2Q96SN7 254 aa16.68■□□□□ 0.26
RTFDC1-202ENST00000357348 XIRP1Q702N8 1843 aaKnown RBP16.67■□□□□ 0.26
RTFDC1-202ENST00000357348 INSRP06213 1382 aa16.67■□□□□ 0.26
RTFDC1-202ENST00000357348 CPSF1Q10570 1443 aaKnown RBP16.67■□□□□ 0.26
RTFDC1-202ENST00000357348 FYB1O15117 783 aa16.66■□□□□ 0.26
RTFDC1-202ENST00000357348 ZRANB1Q9UGI0 708 aa16.66■□□□□ 0.26
RTFDC1-202ENST00000357348 AKAP12Q02952 1782 aa16.66■□□□□ 0.26
RTFDC1-202ENST00000357348 PDE3BQ13370 1112 aa16.66■□□□□ 0.26
RTFDC1-202ENST00000357348 PLEKHG3A1L390 1219 aa16.65■□□□□ 0.26
RTFDC1-202ENST00000357348 ATF3P18847 181 aa16.65■□□□□ 0.26
RTFDC1-202ENST00000357348 NME9Q86XW9 330 aa16.65■□□□□ 0.26
RTFDC1-202ENST00000357348 MS4A1P11836 297 aa16.65■□□□□ 0.26
RTFDC1-202ENST00000357348 PPP2R1AP30153 589 aa16.65■□□□□ 0.26
RTFDC1-202ENST00000357348 MON2Q7Z3U7 1717 aa16.64■□□□□ 0.25
RTFDC1-202ENST00000357348 FBLN1P23142 703 aa16.64■□□□□ 0.25
RTFDC1-202ENST00000357348 LRRC7Q96NW7 1537 aa16.64■□□□□ 0.25
RTFDC1-202ENST00000357348 SENP3-EIF4A1A0A087X0R7 540 aa16.64■□□□□ 0.25
RTFDC1-202ENST00000357348 XPCQ01831 940 aaPredicted RBP16.64■□□□□ 0.25
RTFDC1-202ENST00000357348 ZNF692Q9BU19 519 aaPredicted RBP16.64■□□□□ 0.25
RTFDC1-202ENST00000357348 PHF8Q9UPP1 1060 aa16.64■□□□□ 0.25
RTFDC1-202ENST00000357348 KIF20BQ96Q89 1820 aa16.63■□□□□ 0.25
RTFDC1-202ENST00000357348 ANKARQ7Z5J8 1434 aa16.63■□□□□ 0.25
RTFDC1-202ENST00000357348 NLRP13Q86W25 1043 aa16.63■□□□□ 0.25
RTFDC1-202ENST00000357348 NPC1L1Q9UHC9 1359 aa16.63■□□□□ 0.25
RTFDC1-202ENST00000357348 MSH6P52701 1360 aa16.62■□□□□ 0.25
RTFDC1-202ENST00000357348 FOXO3O43524 673 aa16.62■□□□□ 0.25
RTFDC1-202ENST00000357348 PLEKHG5O94827 1062 aa16.61■□□□□ 0.25
RTFDC1-202ENST00000357348 RTL5Q5HYW3 569 aaPredicted RBP16.61■□□□□ 0.25
RTFDC1-202ENST00000357348 EXOC6Q8TAG9 804 aa16.61■□□□□ 0.25
RTFDC1-202ENST00000357348 RCAN3Q9UKA8 241 aa16.61■□□□□ 0.25
RTFDC1-202ENST00000357348 EDC4Q6P2E9 1401 aaKnown RBP16.61■□□□□ 0.25
RTFDC1-202ENST00000357348 USP6P35125 1406 aa16.61■□□□□ 0.25
RTFDC1-202ENST00000357348 NUTM2GQ5VZR2 741 aa16.61■□□□□ 0.25
RTFDC1-202ENST00000357348 SOX12O15370 315 aa16.6■□□□□ 0.25
RTFDC1-202ENST00000357348 DDX17Q92841 729 aaKnown RBP16.6■□□□□ 0.25
RTFDC1-202ENST00000357348 TTC21BQ7Z4L5 1316 aa16.6■□□□□ 0.25
RTFDC1-202ENST00000357348 BACH2Q9BYV9 841 aa16.6■□□□□ 0.25
RTFDC1-202ENST00000357348 PSME1Q06323 249 aa16.59■□□□□ 0.25
RTFDC1-202ENST00000357348 USP35Q9P2H5 1018 aa16.59■□□□□ 0.25
RTFDC1-202ENST00000357348 C1orf167Q5SNV9 1468 aa16.58■□□□□ 0.25
RTFDC1-202ENST00000357348 POLR3AO14802 1390 aaPredicted RBP16.58■□□□□ 0.25
RTFDC1-202ENST00000357348 PDE4AP27815 886 aa16.58■□□□□ 0.25
RTFDC1-202ENST00000357348 CADPS2Q86UW7 1296 aa16.58■□□□□ 0.25
RTFDC1-202ENST00000357348 ANKRD26Q9UPS8 1709 aa16.57■□□□□ 0.24
RTFDC1-202ENST00000357348 MST1RQ04912 1400 aa16.57■□□□□ 0.24
RTFDC1-202ENST00000357348 NRKQ7Z2Y5 1582 aa16.57■□□□□ 0.24
RTFDC1-202ENST00000357348 NSD2O96028 1365 aa16.57■□□□□ 0.24
RTFDC1-202ENST00000357348 PPM1GO15355 546 aaPredicted RBP16.57■□□□□ 0.24
RTFDC1-202ENST00000357348 MTHFSP49914 203 aa16.56■□□□□ 0.24
RTFDC1-202ENST00000357348 COG3Q96JB2 828 aa16.56■□□□□ 0.24
RTFDC1-202ENST00000357348 NCOA3Q9Y6Q9 1424 aa16.56■□□□□ 0.24
RTFDC1-202ENST00000357348 LMOD2Q6P5Q4 547 aa16.55■□□□□ 0.24
RTFDC1-202ENST00000357348 BLMP54132 1417 aaPredicted RBP16.55■□□□□ 0.24
RTFDC1-202ENST00000357348 ABTB2Q8N961 1025 aa16.54■□□□□ 0.24
RTFDC1-202ENST00000357348 MAP2P11137 1827 aaKnown RBP16.54■□□□□ 0.24
RTFDC1-202ENST00000357348 DCCP43146 1447 aa16.53■□□□□ 0.24
RTFDC1-202ENST00000357348 SSH2Q76I76 1423 aa16.53■□□□□ 0.24
RTFDC1-202ENST00000357348 NLRP6P59044 892 aa16.53■□□□□ 0.24
RTFDC1-202ENST00000357348 RRS1Q15050 365 aaKnown RBP16.53■□□□□ 0.24
RTFDC1-202ENST00000357348 SLAIN2Q9P270 581 aa16.52■□□□□ 0.24
RTFDC1-202ENST00000357348 PIK3C2AO00443 1686 aa16.51■□□□□ 0.23
RTFDC1-202ENST00000357348 KRT28Q7Z3Y7 464 aa16.51■□□□□ 0.23
RTFDC1-202ENST00000357348 EMILIN1Q9Y6C2 1016 aa16.51■□□□□ 0.23
RTFDC1-202ENST00000357348 TTC21AQ8NDW8 1320 aa16.5■□□□□ 0.23
RTFDC1-202ENST00000357348 BRINP3Q76B58 766 aa16.49■□□□□ 0.23
RTFDC1-202ENST00000357348 LTBP4Q8N2S1 1624 aa16.49■□□□□ 0.23
RTFDC1-202ENST00000357348 ADAMTS8Q9UP79 889 aa16.49■□□□□ 0.23
RTFDC1-202ENST00000357348 SALL2Q9Y467 1007 aaPredicted RBP16.49■□□□□ 0.23
RTFDC1-202ENST00000357348 WDR43Q15061 677 aaKnown RBP eCLIP16.48■□□□□ 0.23
RTFDC1-202ENST00000357348 POLKQ9UBT6 870 aa16.48■□□□□ 0.23
RTFDC1-202ENST00000357348 KIF1AQ12756 1690 aa16.48■□□□□ 0.23
RTFDC1-202ENST00000357348 OVOS2A0A0J9YW53 1432 aa16.47■□□□□ 0.23
RTFDC1-202ENST00000357348 OVOS2Q6IE36 1432 aa16.47■□□□□ 0.23
RTFDC1-202ENST00000357348 CDCA7LQ96GN5 454 aa16.46■□□□□ 0.23
RTFDC1-202ENST00000357348 ZBTB7CA1YPR0 619 aa16.46■□□□□ 0.23
RTFDC1-202ENST00000357348 CFAP53Q96M91 514 aa16.46■□□□□ 0.23
RTFDC1-202ENST00000357348 NPM2Q86SE8 214 aaKnown RBP16.45■□□□□ 0.22
RTFDC1-202ENST00000357348 DDRGK1Q96HY6 314 aa16.45■□□□□ 0.22
RTFDC1-202ENST00000357348 MARF1Q9Y4F3 1742 aaKnown RBP16.45■□□□□ 0.22
RTFDC1-202ENST00000357348 CCDC146Q8IYE0 955 aa16.45■□□□□ 0.22
RTFDC1-202ENST00000357348 NEFMP07197 916 aa16.44■□□□□ 0.22
RTFDC1-202ENST00000357348 NPHP3Q7Z494 1330 aa16.44■□□□□ 0.22
RTFDC1-202ENST00000357348 U2SURPO15042 1029 aaKnown RBP16.43■□□□□ 0.22
RTFDC1-202ENST00000357348 KDM2BQ8NHM5 1336 aa16.43■□□□□ 0.22
RTFDC1-202ENST00000357348 TRPM3Q9HCF6 1732 aaPredicted RBP16.43■□□□□ 0.22
RTFDC1-202ENST00000357348 SHPRHQ149N8 1683 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms