RNA–Protein interactions for RNA: ENST00000357179.9

TOP3B-201, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 2,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-201ENST00000357179 CIZ1Q9ULV3 898 aaPredicted RBP18.37■□□□□ 0.53
TOP3B-201ENST00000357179 RLBP1P12271 317 aa18.36■□□□□ 0.53
TOP3B-201ENST00000357179 GBP4Q96PP9 640 aa18.36■□□□□ 0.53
TOP3B-201ENST00000357179 KIDINS220Q9ULH0 1771 aa18.36■□□□□ 0.53
TOP3B-201ENST00000357179 MFAP1P55081 439 aaKnown RBP18.36■□□□□ 0.53
TOP3B-201ENST00000357179 RPGRIP1LQ68CZ1 1315 aa18.35■□□□□ 0.53
TOP3B-201ENST00000357179 MSNP26038 577 aaKnown RBP18.35■□□□□ 0.53
TOP3B-201ENST00000357179 SMAP1Q8IYB5 467 aaPredicted RBP18.35■□□□□ 0.53
TOP3B-201ENST00000357179 SLC12A5Q9H2X9 1139 aa18.35■□□□□ 0.53
TOP3B-201ENST00000357179 RRP7AQ9Y3A4 280 aaKnown RBP18.35■□□□□ 0.53
TOP3B-201ENST00000357179 NEUROD2Q15784 382 aa18.35■□□□□ 0.53
TOP3B-201ENST00000357179 SMC5Q8IY18 1101 aa18.35■□□□□ 0.53
TOP3B-201ENST00000357179 NASPP49321 788 aaPredicted RBP18.34■□□□□ 0.53
TOP3B-201ENST00000357179 MTHFSP49914 203 aa18.34■□□□□ 0.53
TOP3B-201ENST00000357179 MVPQ14764 893 aaKnown RBP18.34■□□□□ 0.53
TOP3B-201ENST00000357179 RAB3GAP1Q15042 981 aa18.34■□□□□ 0.53
TOP3B-201ENST00000357179 SNX21Q969T3 373 aa18.34■□□□□ 0.53
TOP3B-201ENST00000357179 FAM13BQ9NYF5 915 aa18.33■□□□□ 0.53
TOP3B-201ENST00000357179 TRAK1Q9UPV9 953 aa18.33■□□□□ 0.52
TOP3B-201ENST00000357179 ANKRD36BQ8N2N9 1353 aa18.32■□□□□ 0.52
TOP3B-201ENST00000357179 IBTKQ9P2D0 1353 aaPredicted RBP18.32■□□□□ 0.52
TOP3B-201ENST00000357179 HS1BP3Q53T59 392 aa18.31■□□□□ 0.52
TOP3B-201ENST00000357179 ZKSCAN2Q63HK3 967 aa18.31■□□□□ 0.52
TOP3B-201ENST00000357179 MTERF4Q7Z6M4 381 aaKnown RBP18.31■□□□□ 0.52
TOP3B-201ENST00000357179 ANP32BQ92688 251 aaKnown RBP18.31■□□□□ 0.52
TOP3B-201ENST00000357179 TNNQ9UQP3 1299 aa18.31■□□□□ 0.52
TOP3B-201ENST00000357179 TNNT2P45379 298 aaPredicted RBP18.3■□□□□ 0.52
TOP3B-201ENST00000357179 R3HCC1Q9Y3T6 440 aaKnown RBP18.3■□□□□ 0.52
TOP3B-201ENST00000357179 NPATQ14207 1427 aa18.3■□□□□ 0.52
TOP3B-201ENST00000357179 A0A0U1RQG5 324 aaPredicted RBP18.29■□□□□ 0.52
TOP3B-201ENST00000357179 RBM25P49756 843 aaKnown RBP18.29■□□□□ 0.52
TOP3B-201ENST00000357179 DZIP1LQ8IYY4 767 aaKnown RBP18.29■□□□□ 0.52
TOP3B-201ENST00000357179 ZNF500O60304 480 aaPredicted RBP18.28■□□□□ 0.52
TOP3B-201ENST00000357179 EVC2Q86UK5 1308 aa18.28■□□□□ 0.52
TOP3B-201ENST00000357179 GLI2P10070 1586 aa18.28■□□□□ 0.52
TOP3B-201ENST00000357179 HDAC1Q13547 482 aaPredicted RBP18.28■□□□□ 0.52
TOP3B-201ENST00000357179 BCL2L13Q9BXK5 485 aa18.28■□□□□ 0.52
TOP3B-201ENST00000357179 TULP4Q9NRJ4 1543 aa18.27■□□□□ 0.52
TOP3B-201ENST00000357179 NOL7Q9UMY1 257 aaKnown RBP18.27■□□□□ 0.51
TOP3B-201ENST00000357179 UQCRHLA0A096LP55 91 aa18.26■□□□□ 0.51
TOP3B-201ENST00000357179 UQCRHP07919 91 aa18.26■□□□□ 0.51
TOP3B-201ENST00000357179 ARHGEF28Q8N1W1 1705 aaKnown RBP18.26■□□□□ 0.51
TOP3B-201ENST00000357179 FTSJ3Q8IY81 847 aaKnown RBP18.26■□□□□ 0.51
TOP3B-201ENST00000357179 HECW2Q9P2P5 1572 aa18.26■□□□□ 0.51
TOP3B-201ENST00000357179 U2AF1L5P0DN76 240 aaPredicted RBP18.25■□□□□ 0.51
TOP3B-201ENST00000357179 CHGAP10645 457 aaKnown RBP18.25■□□□□ 0.51
TOP3B-201ENST00000357179 U2AF1Q01081 240 aaKnown RBP eCLIP18.25■□□□□ 0.51
TOP3B-201ENST00000357179 DYNC1I1O14576 645 aa18.25■□□□□ 0.51
TOP3B-201ENST00000357179 IL16Q14005 1332 aa18.25■□□□□ 0.51
TOP3B-201ENST00000357179 KLHL40Q2TBA0 621 aa18.24■□□□□ 0.51
TOP3B-201ENST00000357179 DDX19BQ9UMR2 479 aa18.24■□□□□ 0.51
TOP3B-201ENST00000357179 ABCC11Q96J66 1382 aa18.24■□□□□ 0.51
TOP3B-201ENST00000357179 HSP90AB1P08238 724 aaKnown RBP18.24■□□□□ 0.51
TOP3B-201ENST00000357179 CLEC17AQ6ZS10 378 aa18.24■□□□□ 0.51
TOP3B-201ENST00000357179 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.23■□□□□ 0.51
TOP3B-201ENST00000357179 TMEM132EQ6IEE7 984 aa18.23■□□□□ 0.51
TOP3B-201ENST00000357179 MLH3Q9UHC1 1453 aa18.22■□□□□ 0.51
TOP3B-201ENST00000357179 FRMPD1Q5SYB0 1578 aa18.22■□□□□ 0.51
TOP3B-201ENST00000357179 PIK3C2BO00750 1634 aa18.22■□□□□ 0.51
TOP3B-201ENST00000357179 FGD1P98174 961 aa18.22■□□□□ 0.51
TOP3B-201ENST00000357179 PDLIM2Q96JY6 352 aa18.22■□□□□ 0.51
TOP3B-201ENST00000357179 UTP14CQ5TAP6 766 aaKnown RBP18.22■□□□□ 0.51
TOP3B-201ENST00000357179 PLEKHF1Q96S99 279 aa18.22■□□□□ 0.51
TOP3B-201ENST00000357179 ARHGAP31Q2M1Z3 1444 aa18.22■□□□□ 0.51
TOP3B-201ENST00000357179 ASXL2Q76L83 1435 aa18.22■□□□□ 0.51
TOP3B-201ENST00000357179 ZNF445P59923 1031 aa18.21■□□□□ 0.51
TOP3B-201ENST00000357179 COL3A1P02461 1466 aaPredicted RBP18.21■□□□□ 0.51
TOP3B-201ENST00000357179 CFAP74Q9C0B2 1584 aa18.21■□□□□ 0.51
TOP3B-201ENST00000357179 GOLGA6L22H0YM25 854 aa18.21■□□□□ 0.51
TOP3B-201ENST00000357179 SMC4Q9NTJ3 1288 aa18.21■□□□□ 0.51
TOP3B-201ENST00000357179 CAMSAP1Q5T5Y3 1602 aa18.21■□□□□ 0.5
TOP3B-201ENST00000357179 ABCC3O15438 1527 aa18.21■□□□□ 0.5
TOP3B-201ENST00000357179 MED14O60244 1454 aa18.21■□□□□ 0.5
TOP3B-201ENST00000357179 CD109Q6YHK3 1445 aa18.21■□□□□ 0.5
TOP3B-201ENST00000357179 TRIM27P14373 513 aa18.2■□□□□ 0.5
TOP3B-201ENST00000357179 ATF7IPQ6VMQ6 1270 aa18.2■□□□□ 0.5
TOP3B-201ENST00000357179 VGFO15240 615 aaPredicted RBP18.2■□□□□ 0.5
TOP3B-201ENST00000357179 TMPOP42166 694 aaKnown RBP18.2■□□□□ 0.5
TOP3B-201ENST00000357179 XPCQ01831 940 aaPredicted RBP18.2■□□□□ 0.5
TOP3B-201ENST00000357179 CSPP1Q1MSJ5 1256 aa18.2■□□□□ 0.5
TOP3B-201ENST00000357179 NEXMIFQ5QGS0 1516 aa18.19■□□□□ 0.5
TOP3B-201ENST00000357179 EXOSC9Q06265 439 aaKnown RBP18.19■□□□□ 0.5
TOP3B-201ENST00000357179 DDX49Q9Y6V7 483 aaKnown RBP18.19■□□□□ 0.5
TOP3B-201ENST00000357179 POGZQ7Z3K3 1410 aa18.19■□□□□ 0.5
TOP3B-201ENST00000357179 DMTNQ08495 405 aa18.18■□□□□ 0.5
TOP3B-201ENST00000357179 ANKRD26Q9UPS8 1709 aa18.18■□□□□ 0.5
TOP3B-201ENST00000357179 TRIM35Q9UPQ4 493 aa18.18■□□□□ 0.5
TOP3B-201ENST00000357179 MCM5P33992 734 aa18.17■□□□□ 0.5
TOP3B-201ENST00000357179 SSH1Q8WYL5 1049 aa18.17■□□□□ 0.5
TOP3B-201ENST00000357179 TSR2Q969E8 191 aaKnown RBP18.17■□□□□ 0.5
TOP3B-201ENST00000357179 ZKSCAN5Q9Y2L8 839 aa18.17■□□□□ 0.5
TOP3B-201ENST00000357179 ZFYVE9O95405 1425 aa18.17■□□□□ 0.5
TOP3B-201ENST00000357179 SSFA2P28290 1259 aa18.17■□□□□ 0.5
TOP3B-201ENST00000357179 KIF2CQ99661 725 aa18.17■□□□□ 0.5
TOP3B-201ENST00000357179 ZHX1Q9UKY1 873 aaPredicted RBP18.16■□□□□ 0.5
TOP3B-201ENST00000357179 KIF16BQ96L93 1317 aa18.16■□□□□ 0.5
TOP3B-201ENST00000357179 SASS6Q6UVJ0 657 aa18.16■□□□□ 0.5
TOP3B-201ENST00000357179 CCDC94Q9BW85 323 aaPredicted RBP18.16■□□□□ 0.5
TOP3B-201ENST00000357179 A0A1W2PP64 1363 aa18.16■□□□□ 0.5
TOP3B-201ENST00000357179 BAG4O95429 457 aaKnown RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms