RNA–Protein interactions for RNA: ENST00000357179.9

TOP3B-201, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 2,863 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-201ENST00000357179 CIZ1Q9ULV3 898 aaPredicted RBP18.37■□□□□ 0.53
TOP3B-201ENST00000357179 RLBP1P12271 317 aa18.36■□□□□ 0.53
TOP3B-201ENST00000357179 GBP4Q96PP9 640 aa18.36■□□□□ 0.53
TOP3B-201ENST00000357179 KIDINS220Q9ULH0 1771 aa18.36■□□□□ 0.53
TOP3B-201ENST00000357179 MFAP1P55081 439 aaKnown RBP18.36■□□□□ 0.53
TOP3B-201ENST00000357179 RPGRIP1LQ68CZ1 1315 aa18.35■□□□□ 0.53
TOP3B-201ENST00000357179 MSNP26038 577 aaKnown RBP18.35■□□□□ 0.53
TOP3B-201ENST00000357179 SMAP1Q8IYB5 467 aaPredicted RBP18.35■□□□□ 0.53
TOP3B-201ENST00000357179 SLC12A5Q9H2X9 1139 aa18.35■□□□□ 0.53
TOP3B-201ENST00000357179 RRP7AQ9Y3A4 280 aaKnown RBP18.35■□□□□ 0.53
TOP3B-201ENST00000357179 NEUROD2Q15784 382 aa18.35■□□□□ 0.53
TOP3B-201ENST00000357179 SMC5Q8IY18 1101 aa18.35■□□□□ 0.53
TOP3B-201ENST00000357179 NASPP49321 788 aaPredicted RBP18.34■□□□□ 0.53
TOP3B-201ENST00000357179 MTHFSP49914 203 aa18.34■□□□□ 0.53
TOP3B-201ENST00000357179 MVPQ14764 893 aaKnown RBP18.34■□□□□ 0.53
TOP3B-201ENST00000357179 RAB3GAP1Q15042 981 aa18.34■□□□□ 0.53
TOP3B-201ENST00000357179 SNX21Q969T3 373 aa18.34■□□□□ 0.53
TOP3B-201ENST00000357179 FAM13BQ9NYF5 915 aa18.33■□□□□ 0.53
TOP3B-201ENST00000357179 TRAK1Q9UPV9 953 aa18.33■□□□□ 0.52
TOP3B-201ENST00000357179 ANKRD36BQ8N2N9 1353 aa18.32■□□□□ 0.52
TOP3B-201ENST00000357179 IBTKQ9P2D0 1353 aaPredicted RBP18.32■□□□□ 0.52
TOP3B-201ENST00000357179 HS1BP3Q53T59 392 aa18.31■□□□□ 0.52
TOP3B-201ENST00000357179 ZKSCAN2Q63HK3 967 aa18.31■□□□□ 0.52
TOP3B-201ENST00000357179 MTERF4Q7Z6M4 381 aaKnown RBP18.31■□□□□ 0.52
TOP3B-201ENST00000357179 ANP32BQ92688 251 aaKnown RBP18.31■□□□□ 0.52
TOP3B-201ENST00000357179 TNNQ9UQP3 1299 aa18.31■□□□□ 0.52
TOP3B-201ENST00000357179 TNNT2P45379 298 aaPredicted RBP18.3■□□□□ 0.52
TOP3B-201ENST00000357179 R3HCC1Q9Y3T6 440 aaKnown RBP18.3■□□□□ 0.52
TOP3B-201ENST00000357179 NPATQ14207 1427 aa18.3■□□□□ 0.52
TOP3B-201ENST00000357179 A0A0U1RQG5 324 aaPredicted RBP18.29■□□□□ 0.52
TOP3B-201ENST00000357179 RBM25P49756 843 aaKnown RBP18.29■□□□□ 0.52
TOP3B-201ENST00000357179 DZIP1LQ8IYY4 767 aaKnown RBP18.29■□□□□ 0.52
TOP3B-201ENST00000357179 ZNF500O60304 480 aaPredicted RBP18.28■□□□□ 0.52
TOP3B-201ENST00000357179 EVC2Q86UK5 1308 aa18.28■□□□□ 0.52
TOP3B-201ENST00000357179 GLI2P10070 1586 aa18.28■□□□□ 0.52
TOP3B-201ENST00000357179 HDAC1Q13547 482 aaPredicted RBP18.28■□□□□ 0.52
TOP3B-201ENST00000357179 BCL2L13Q9BXK5 485 aa18.28■□□□□ 0.52
TOP3B-201ENST00000357179 TULP4Q9NRJ4 1543 aa18.27■□□□□ 0.52
TOP3B-201ENST00000357179 NOL7Q9UMY1 257 aaKnown RBP18.27■□□□□ 0.51
TOP3B-201ENST00000357179 UQCRHLA0A096LP55 91 aa18.26■□□□□ 0.51
TOP3B-201ENST00000357179 UQCRHP07919 91 aa18.26■□□□□ 0.51
TOP3B-201ENST00000357179 ARHGEF28Q8N1W1 1705 aaKnown RBP18.26■□□□□ 0.51
TOP3B-201ENST00000357179 FTSJ3Q8IY81 847 aaKnown RBP18.26■□□□□ 0.51
TOP3B-201ENST00000357179 HECW2Q9P2P5 1572 aa18.26■□□□□ 0.51
TOP3B-201ENST00000357179 U2AF1L5P0DN76 240 aaPredicted RBP18.25■□□□□ 0.51
TOP3B-201ENST00000357179 CHGAP10645 457 aaKnown RBP18.25■□□□□ 0.51
TOP3B-201ENST00000357179 U2AF1Q01081 240 aaKnown RBP eCLIP18.25■□□□□ 0.51
TOP3B-201ENST00000357179 DYNC1I1O14576 645 aa18.25■□□□□ 0.51
TOP3B-201ENST00000357179 IL16Q14005 1332 aa18.25■□□□□ 0.51
TOP3B-201ENST00000357179 KLHL40Q2TBA0 621 aa18.24■□□□□ 0.51
TOP3B-201ENST00000357179 DDX19BQ9UMR2 479 aa18.24■□□□□ 0.51
TOP3B-201ENST00000357179 ABCC11Q96J66 1382 aa18.24■□□□□ 0.51
TOP3B-201ENST00000357179 HSP90AB1P08238 724 aaKnown RBP18.24■□□□□ 0.51
TOP3B-201ENST00000357179 CLEC17AQ6ZS10 378 aa18.24■□□□□ 0.51
TOP3B-201ENST00000357179 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.23■□□□□ 0.51
TOP3B-201ENST00000357179 TMEM132EQ6IEE7 984 aa18.23■□□□□ 0.51
TOP3B-201ENST00000357179 MLH3Q9UHC1 1453 aa18.22■□□□□ 0.51
TOP3B-201ENST00000357179 FRMPD1Q5SYB0 1578 aa18.22■□□□□ 0.51
TOP3B-201ENST00000357179 PIK3C2BO00750 1634 aa18.22■□□□□ 0.51
TOP3B-201ENST00000357179 FGD1P98174 961 aa18.22■□□□□ 0.51
TOP3B-201ENST00000357179 PDLIM2Q96JY6 352 aa18.22■□□□□ 0.51
TOP3B-201ENST00000357179 UTP14CQ5TAP6 766 aaKnown RBP18.22■□□□□ 0.51
TOP3B-201ENST00000357179 PLEKHF1Q96S99 279 aa18.22■□□□□ 0.51
TOP3B-201ENST00000357179 ARHGAP31Q2M1Z3 1444 aa18.22■□□□□ 0.51
TOP3B-201ENST00000357179 ASXL2Q76L83 1435 aa18.22■□□□□ 0.51
TOP3B-201ENST00000357179 ZNF445P59923 1031 aa18.21■□□□□ 0.51
TOP3B-201ENST00000357179 COL3A1P02461 1466 aaPredicted RBP18.21■□□□□ 0.51
TOP3B-201ENST00000357179 CFAP74Q9C0B2 1584 aa18.21■□□□□ 0.51
TOP3B-201ENST00000357179 GOLGA6L22H0YM25 854 aa18.21■□□□□ 0.51
TOP3B-201ENST00000357179 SMC4Q9NTJ3 1288 aa18.21■□□□□ 0.51
TOP3B-201ENST00000357179 CAMSAP1Q5T5Y3 1602 aa18.21■□□□□ 0.5
TOP3B-201ENST00000357179 ABCC3O15438 1527 aa18.21■□□□□ 0.5
TOP3B-201ENST00000357179 MED14O60244 1454 aa18.21■□□□□ 0.5
TOP3B-201ENST00000357179 CD109Q6YHK3 1445 aa18.21■□□□□ 0.5
TOP3B-201ENST00000357179 TRIM27P14373 513 aa18.2■□□□□ 0.5
TOP3B-201ENST00000357179 ATF7IPQ6VMQ6 1270 aa18.2■□□□□ 0.5
TOP3B-201ENST00000357179 VGFO15240 615 aaPredicted RBP18.2■□□□□ 0.5
TOP3B-201ENST00000357179 TMPOP42166 694 aaKnown RBP18.2■□□□□ 0.5
TOP3B-201ENST00000357179 XPCQ01831 940 aaPredicted RBP18.2■□□□□ 0.5
TOP3B-201ENST00000357179 CSPP1Q1MSJ5 1256 aa18.2■□□□□ 0.5
TOP3B-201ENST00000357179 NEXMIFQ5QGS0 1516 aa18.19■□□□□ 0.5
TOP3B-201ENST00000357179 EXOSC9Q06265 439 aaKnown RBP18.19■□□□□ 0.5
TOP3B-201ENST00000357179 DDX49Q9Y6V7 483 aaKnown RBP18.19■□□□□ 0.5
TOP3B-201ENST00000357179 POGZQ7Z3K3 1410 aa18.19■□□□□ 0.5
TOP3B-201ENST00000357179 DMTNQ08495 405 aa18.18■□□□□ 0.5
TOP3B-201ENST00000357179 ANKRD26Q9UPS8 1709 aa18.18■□□□□ 0.5
TOP3B-201ENST00000357179 TRIM35Q9UPQ4 493 aa18.18■□□□□ 0.5
TOP3B-201ENST00000357179 MCM5P33992 734 aa18.17■□□□□ 0.5
TOP3B-201ENST00000357179 SSH1Q8WYL5 1049 aa18.17■□□□□ 0.5
TOP3B-201ENST00000357179 TSR2Q969E8 191 aaKnown RBP18.17■□□□□ 0.5
TOP3B-201ENST00000357179 ZKSCAN5Q9Y2L8 839 aa18.17■□□□□ 0.5
TOP3B-201ENST00000357179 ZFYVE9O95405 1425 aa18.17■□□□□ 0.5
TOP3B-201ENST00000357179 SSFA2P28290 1259 aa18.17■□□□□ 0.5
TOP3B-201ENST00000357179 KIF2CQ99661 725 aa18.17■□□□□ 0.5
TOP3B-201ENST00000357179 ZHX1Q9UKY1 873 aaPredicted RBP18.16■□□□□ 0.5
TOP3B-201ENST00000357179 KIF16BQ96L93 1317 aa18.16■□□□□ 0.5
TOP3B-201ENST00000357179 SASS6Q6UVJ0 657 aa18.16■□□□□ 0.5
TOP3B-201ENST00000357179 CCDC94Q9BW85 323 aaPredicted RBP18.16■□□□□ 0.5
TOP3B-201ENST00000357179 A0A1W2PP64 1363 aa18.16■□□□□ 0.5
TOP3B-201ENST00000357179 BAG4O95429 457 aaKnown RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms