RNA–Protein interactions for RNA: ENST00000356937.7

CDK11A-202, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 2,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-202ENST00000356937 HNRNPUQ00839 825 aaKnown RBP eCLIP24.15■■□□□ 1.46
CDK11A-202ENST00000356937 PHF8Q9UPP1 1060 aa24.15■■□□□ 1.46
CDK11A-202ENST00000356937 TTC21BQ7Z4L5 1316 aa24.14■■□□□ 1.46
CDK11A-202ENST00000356937 ZRANB1Q9UGI0 708 aa24.14■■□□□ 1.45
CDK11A-202ENST00000356937 ATF3P18847 181 aa24.13■■□□□ 1.45
CDK11A-202ENST00000356937 NCOA3Q9Y6Q9 1424 aa24.12■■□□□ 1.45
CDK11A-202ENST00000356937 NRKQ7Z2Y5 1582 aa24.11■■□□□ 1.45
CDK11A-202ENST00000356937 MTHFSP49914 203 aa24.11■■□□□ 1.45
CDK11A-202ENST00000356937 ORAI2Q96SN7 254 aa24.1■■□□□ 1.45
CDK11A-202ENST00000356937 COG3Q96JB2 828 aa24.09■■□□□ 1.45
CDK11A-202ENST00000356937 LRRC7Q96NW7 1537 aa24.09■■□□□ 1.45
CDK11A-202ENST00000356937 XIRP1Q702N8 1843 aaKnown RBP24.09■■□□□ 1.45
CDK11A-202ENST00000356937 MSH6P52701 1360 aa24.08■■□□□ 1.45
CDK11A-202ENST00000356937 SSH2Q76I76 1423 aa24.08■■□□□ 1.45
CDK11A-202ENST00000356937 FBLN1P23142 703 aa24.07■■□□□ 1.44
CDK11A-202ENST00000356937 C1orf167Q5SNV9 1468 aa24.07■■□□□ 1.44
CDK11A-202ENST00000356937 WDR43Q15061 677 aaKnown RBP eCLIP24.07■■□□□ 1.44
CDK11A-202ENST00000356937 CADPS2Q86UW7 1296 aa24.06■■□□□ 1.44
CDK11A-202ENST00000356937 DCCP43146 1447 aa24.06■■□□□ 1.44
CDK11A-202ENST00000356937 TTC21AQ8NDW8 1320 aa24.06■■□□□ 1.44
CDK11A-202ENST00000356937 PAK3O75914 559 aaPredicted RBP24.05■■□□□ 1.44
CDK11A-202ENST00000356937 PSME1Q06323 249 aa24.04■■□□□ 1.44
CDK11A-202ENST00000356937 SENP3-EIF4A1A0A087X0R7 540 aa24.04■■□□□ 1.44
CDK11A-202ENST00000356937 MST1RQ04912 1400 aa24.03■■□□□ 1.44
CDK11A-202ENST00000356937 FOXO3O43524 673 aa24.03■■□□□ 1.44
CDK11A-202ENST00000356937 CFAP53Q96M91 514 aa24.03■■□□□ 1.44
CDK11A-202ENST00000356937 ADAMTS8Q9UP79 889 aa24.03■■□□□ 1.44
CDK11A-202ENST00000356937 MAP2P11137 1827 aaKnown RBP24.01■■□□□ 1.43
CDK11A-202ENST00000356937 PPM1GO15355 546 aaPredicted RBP24■■□□□ 1.43
CDK11A-202ENST00000356937 XPCQ01831 940 aaPredicted RBP24■■□□□ 1.43
CDK11A-202ENST00000356937 NUTM2GQ5VZR2 741 aa23.99■■□□□ 1.43
CDK11A-202ENST00000356937 POLKQ9UBT6 870 aa23.99■■□□□ 1.43
CDK11A-202ENST00000356937 OVOS2A0A0J9YW53 1432 aa23.99■■□□□ 1.43
CDK11A-202ENST00000356937 OVOS2Q6IE36 1432 aa23.99■■□□□ 1.43
CDK11A-202ENST00000356937 ABTB2Q8N961 1025 aa23.99■■□□□ 1.43
CDK11A-202ENST00000356937 NLRP6P59044 892 aa23.98■■□□□ 1.43
CDK11A-202ENST00000356937 PIK3C2AO00443 1686 aa23.98■■□□□ 1.43
CDK11A-202ENST00000356937 SOX12O15370 315 aa23.98■■□□□ 1.43
CDK11A-202ENST00000356937 RRS1Q15050 365 aaKnown RBP23.96■■□□□ 1.43
CDK11A-202ENST00000356937 EMILIN1Q9Y6C2 1016 aa23.96■■□□□ 1.43
CDK11A-202ENST00000356937 KIF1AQ12756 1690 aa23.96■■□□□ 1.43
CDK11A-202ENST00000356937 AATKQ6ZMQ8 1374 aa23.96■■□□□ 1.43
CDK11A-202ENST00000356937 USP31Q70CQ4 1352 aa23.94■■□□□ 1.42
CDK11A-202ENST00000356937 SHPRHQ149N8 1683 aa23.94■■□□□ 1.42
CDK11A-202ENST00000356937 KRT28Q7Z3Y7 464 aa23.94■■□□□ 1.42
CDK11A-202ENST00000356937 ZBED9Q6R2W3 1325 aa23.93■■□□□ 1.42
CDK11A-202ENST00000356937 DDX17Q92841 729 aaKnown RBP23.93■■□□□ 1.42
CDK11A-202ENST00000356937 BLMP54132 1417 aaPredicted RBP23.93■■□□□ 1.42
CDK11A-202ENST00000356937 INSRP06213 1382 aa23.92■■□□□ 1.42
CDK11A-202ENST00000356937 SLAIN2Q9P270 581 aa23.91■■□□□ 1.42
CDK11A-202ENST00000356937 SALL2Q9Y467 1007 aaPredicted RBP23.91■■□□□ 1.42
CDK11A-202ENST00000356937 AEBP2Q6ZN18 517 aaPredicted RBP23.91■■□□□ 1.42
CDK11A-202ENST00000356937 CCDC146Q8IYE0 955 aa23.91■■□□□ 1.42
CDK11A-202ENST00000356937 LMOD2Q6P5Q4 547 aa23.9■■□□□ 1.42
CDK11A-202ENST00000356937 PNPLA6Q8IY17 1366 aa23.9■■□□□ 1.42
CDK11A-202ENST00000356937 COL3A1P02461 1466 aaPredicted RBP23.9■■□□□ 1.42
CDK11A-202ENST00000356937 DIAPH1O60610 1272 aaKnown RBP23.89■■□□□ 1.42
CDK11A-202ENST00000356937 NUDCQ9Y266 331 aa23.89■■□□□ 1.42
CDK11A-202ENST00000356937 U2SURPO15042 1029 aaKnown RBP23.89■■□□□ 1.41
CDK11A-202ENST00000356937 U2AF1L5P0DN76 240 aaPredicted RBP23.88■■□□□ 1.41
CDK11A-202ENST00000356937 U2AF1Q01081 240 aaKnown RBP eCLIP23.88■■□□□ 1.41
CDK11A-202ENST00000356937 SMG6Q86US8 1419 aaKnown RBP23.88■■□□□ 1.41
CDK11A-202ENST00000356937 BRINP3Q76B58 766 aa23.87■■□□□ 1.41
CDK11A-202ENST00000356937 MARF1Q9Y4F3 1742 aaKnown RBP23.87■■□□□ 1.41
CDK11A-202ENST00000356937 NPHP3Q7Z494 1330 aa23.86■■□□□ 1.41
CDK11A-202ENST00000356937 PLEKHG5O94827 1062 aa23.86■■□□□ 1.41
CDK11A-202ENST00000356937 TRPM3Q9HCF6 1732 aaPredicted RBP23.86■■□□□ 1.41
CDK11A-202ENST00000356937 CDK12Q9NYV4 1490 aaPredicted RBP23.86■■□□□ 1.41
CDK11A-202ENST00000356937 USP54Q70EL1 1684 aa23.85■■□□□ 1.41
CDK11A-202ENST00000356937 LTBP4Q8N2S1 1624 aa23.84■■□□□ 1.41
CDK11A-202ENST00000356937 MAP3K19Q56UN5 1328 aa23.84■■□□□ 1.41
CDK11A-202ENST00000356937 GTF3C3Q9Y5Q9 886 aa23.82■■□□□ 1.4
CDK11A-202ENST00000356937 PEAK1Q9H792 1746 aa23.81■■□□□ 1.4
CDK11A-202ENST00000356937 APAF1O14727 1248 aa23.8■■□□□ 1.4
CDK11A-202ENST00000356937 AMPHP49418 695 aa23.8■■□□□ 1.4
CDK11A-202ENST00000356937 IL13P35225 146 aa23.8■■□□□ 1.4
CDK11A-202ENST00000356937 HSP90AB2PQ58FF8 381 aa23.8■■□□□ 1.4
CDK11A-202ENST00000356937 RUNDC1Q96C34 613 aa23.79■■□□□ 1.4
CDK11A-202ENST00000356937 PXDNQ92626 1479 aa23.78■■□□□ 1.4
CDK11A-202ENST00000356937 SBNO1A3KN83 1393 aa23.78■■□□□ 1.4
CDK11A-202ENST00000356937 ALS2Q96Q42 1657 aa23.77■■□□□ 1.4
CDK11A-202ENST00000356937 KCNH5Q8NCM2 988 aa23.77■■□□□ 1.4
CDK11A-202ENST00000356937 FLT4P35916 1363 aa23.76■■□□□ 1.39
CDK11A-202ENST00000356937 EIF4A2Q14240 407 aaKnown RBP23.76■■□□□ 1.39
CDK11A-202ENST00000356937 ZBTB7CA1YPR0 619 aa23.75■■□□□ 1.39
CDK11A-202ENST00000356937 GCP02774 474 aa23.75■■□□□ 1.39
CDK11A-202ENST00000356937 TNS3Q68CZ2 1445 aa23.74■■□□□ 1.39
CDK11A-202ENST00000356937 HMOX1P09601 288 aa23.74■■□□□ 1.39
CDK11A-202ENST00000356937 NFAT5O94916 1531 aa23.74■■□□□ 1.39
CDK11A-202ENST00000356937 SPATA31A3Q5VYP0 1347 aa23.73■■□□□ 1.39
CDK11A-202ENST00000356937 LTN1O94822 1766 aa23.73■■□□□ 1.39
CDK11A-202ENST00000356937 TCP11L2Q8N4U5 519 aa23.73■■□□□ 1.39
CDK11A-202ENST00000356937 USP19O94966 1318 aa23.73■■□□□ 1.39
CDK11A-202ENST00000356937 HOXC9P31274 260 aa23.72■■□□□ 1.39
CDK11A-202ENST00000356937 NEUROD2Q15784 382 aa23.72■■□□□ 1.39
CDK11A-202ENST00000356937 RRP7AQ9Y3A4 280 aaKnown RBP23.72■■□□□ 1.39
CDK11A-202ENST00000356937 SLIT3O75094 1523 aa23.71■■□□□ 1.39
CDK11A-202ENST00000356937 SOS2Q07890 1332 aaPredicted RBP23.71■■□□□ 1.39
CDK11A-202ENST00000356937 FCHSD2O94868 740 aa23.71■■□□□ 1.39
CDK11A-202ENST00000356937 PLEKHF1Q96S99 279 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms