RNA–Protein interactions for RNA: ENST00000356936.5

NCL-202, Transcript of nucleolin, humanhuman

TSL 3

Gene NCL, Length 890 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-202ENST00000356936 ALS2Q96Q42 1657 aa24.39■■□□□ 1.49
NCL-202ENST00000356936 PLEKHG5O94827 1062 aa24.38■■□□□ 1.49
NCL-202ENST00000356936 BCL9LQ86UU0 1499 aa24.38■■□□□ 1.49
NCL-202ENST00000356936 ATRNO75882 1429 aa24.36■■□□□ 1.49
NCL-202ENST00000356936 SBNO2Q9Y2G9 1366 aa24.36■■□□□ 1.49
NCL-202ENST00000356936 SLIT2O94813 1529 aa24.35■■□□□ 1.49
NCL-202ENST00000356936 UNC5CLQ8IV45 518 aa24.35■■□□□ 1.49
NCL-202ENST00000356936 BRD4O60885 1362 aaPredicted RBP24.34■■□□□ 1.49
NCL-202ENST00000356936 TIMELESSQ9UNS1 1208 aa24.34■■□□□ 1.49
NCL-202ENST00000356936 ABCA3Q99758 1704 aa24.34■■□□□ 1.49
NCL-202ENST00000356936 CABP1Q9NZU7 370 aa24.33■■□□□ 1.49
NCL-202ENST00000356936 ATAD2Q6PL18 1390 aa24.31■■□□□ 1.48
NCL-202ENST00000356936 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.31■■□□□ 1.48
NCL-202ENST00000356936 RGS12O14924 1447 aa24.3■■□□□ 1.48
NCL-202ENST00000356936 ABTB2Q8N961 1025 aa24.3■■□□□ 1.48
NCL-202ENST00000356936 GJD4Q96KN9 370 aaPredicted RBP24.3■■□□□ 1.48
NCL-202ENST00000356936 FAM83GA6ND36 823 aa24.29■■□□□ 1.48
NCL-202ENST00000356936 SLC24A1O60721 1099 aa24.28■■□□□ 1.48
NCL-202ENST00000356936 ZNF692Q9BU19 519 aaPredicted RBP24.27■■□□□ 1.48
NCL-202ENST00000356936 NWD2Q9ULI1 1742 aa24.27■■□□□ 1.48
NCL-202ENST00000356936 USP6P35125 1406 aa24.27■■□□□ 1.48
NCL-202ENST00000356936 PLCH1Q4KWH8 1693 aa24.25■■□□□ 1.47
NCL-202ENST00000356936 VPS72Q15906 364 aa24.25■■□□□ 1.47
NCL-202ENST00000356936 NUTM2GQ5VZR2 741 aa24.25■■□□□ 1.47
NCL-202ENST00000356936 NLRP13Q86W25 1043 aa24.25■■□□□ 1.47
NCL-202ENST00000356936 PRDM11Q9NQV5 511 aa24.25■■□□□ 1.47
NCL-202ENST00000356936 CRYBG1Q9Y4K1 1723 aa24.24■■□□□ 1.47
NCL-202ENST00000356936 COL14A1Q05707 1796 aaKnown RBP24.24■■□□□ 1.47
NCL-202ENST00000356936 PUS7Q96PZ0 661 aaKnown RBP24.22■■□□□ 1.47
NCL-202ENST00000356936 BTG4Q9NY30 223 aa24.22■■□□□ 1.47
NCL-202ENST00000356936 CCER1Q8TC90 406 aaPredicted RBP24.21■■□□□ 1.47
NCL-202ENST00000356936 CCDC9Q9Y3X0 531 aaKnown RBP24.21■■□□□ 1.47
NCL-202ENST00000356936 PHRF1Q9P1Y6 1649 aaKnown RBP24.21■■□□□ 1.47
NCL-202ENST00000356936 USP19O94966 1318 aa24.2■■□□□ 1.46
NCL-202ENST00000356936 ST20-MTHFSA0A0A6YYL1 179 aa24.2■■□□□ 1.46
NCL-202ENST00000356936 KIAA0232Q92628 1395 aa24.19■■□□□ 1.46
NCL-202ENST00000356936 UPF1Q92900 1129 aaKnown RBP eCLIP24.19■■□□□ 1.46
NCL-202ENST00000356936 SSH2Q76I76 1423 aa24.18■■□□□ 1.46
NCL-202ENST00000356936 ZC3H6P61129 1189 aaKnown RBP24.18■■□□□ 1.46
NCL-202ENST00000356936 CPSF1Q10570 1443 aaKnown RBP24.18■■□□□ 1.46
NCL-202ENST00000356936 GLI3P10071 1580 aa24.17■■□□□ 1.46
NCL-202ENST00000356936 NLRP6P59044 892 aa24.17■■□□□ 1.46
NCL-202ENST00000356936 TESK2Q96S53 571 aa24.17■■□□□ 1.46
NCL-202ENST00000356936 KTN1Q86UP2 1357 aaKnown RBP24.16■■□□□ 1.46
NCL-202ENST00000356936 TTC21AQ8NDW8 1320 aa24.16■■□□□ 1.46
NCL-202ENST00000356936 GCP02774 474 aa24.16■■□□□ 1.46
NCL-202ENST00000356936 CPDO75976 1380 aa24.16■■□□□ 1.46
NCL-202ENST00000356936 TTC21BQ7Z4L5 1316 aa24.15■■□□□ 1.46
NCL-202ENST00000356936 TMC1Q8TDI8 760 aa24.15■■□□□ 1.46
NCL-202ENST00000356936 NRKQ7Z2Y5 1582 aa24.15■■□□□ 1.46
NCL-202ENST00000356936 USP47Q96K76 1375 aa24.15■■□□□ 1.46
NCL-202ENST00000356936 CHRNA2Q15822 529 aa24.14■■□□□ 1.45
NCL-202ENST00000356936 HDGFL2Q7Z4V5 671 aaPredicted RBP24.14■■□□□ 1.45
NCL-202ENST00000356936 NRAPQ86VF7 1730 aa24.14■■□□□ 1.45
NCL-202ENST00000356936 AKAP12Q02952 1782 aa24.14■■□□□ 1.45
NCL-202ENST00000356936 ONECUT3O60422 494 aaPredicted RBP24.13■■□□□ 1.45
NCL-202ENST00000356936 TERF2IPQ9NYB0 399 aa24.13■■□□□ 1.45
NCL-202ENST00000356936 NINLQ9Y2I6 1382 aa24.13■■□□□ 1.45
NCL-202ENST00000356936 TMF1P82094 1093 aa24.1■■□□□ 1.45
NCL-202ENST00000356936 SEPT12Q8IYM1 358 aa24.1■■□□□ 1.45
NCL-202ENST00000356936 SLC12A5Q9H2X9 1139 aa24.1■■□□□ 1.45
NCL-202ENST00000356936 SPATA31A5Q5VU36 1347 aa24.1■■□□□ 1.45
NCL-202ENST00000356936 SPATA31A7Q8IWB4 1347 aa24.1■■□□□ 1.45
NCL-202ENST00000356936 PIK3C2AO00443 1686 aa24.09■■□□□ 1.45
NCL-202ENST00000356936 EVA1CP58658 441 aa24.09■■□□□ 1.45
NCL-202ENST00000356936 KCNH5Q8NCM2 988 aa24.09■■□□□ 1.45
NCL-202ENST00000356936 SLIT3O75094 1523 aa24.09■■□□□ 1.45
NCL-202ENST00000356936 STRN4Q9NRL3 753 aa24.08■■□□□ 1.45
NCL-202ENST00000356936 CD163L1Q9NR16 1453 aa24.07■■□□□ 1.44
NCL-202ENST00000356936 A0A0G2JS52 829 aa24.07■■□□□ 1.44
NCL-202ENST00000356936 MYT1Q01538 1121 aa24.07■■□□□ 1.44
NCL-202ENST00000356936 CDCA8Q53HL2 280 aa24.07■■□□□ 1.44
NCL-202ENST00000356936 MON2Q7Z3U7 1717 aa24.07■■□□□ 1.44
NCL-202ENST00000356936 FAM98CQ17RN3 349 aaKnown RBP24.06■■□□□ 1.44
NCL-202ENST00000356936 EDC4Q6P2E9 1401 aaKnown RBP24.05■■□□□ 1.44
NCL-202ENST00000356936 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.05■■□□□ 1.44
NCL-202ENST00000356936 CCDC125Q86Z20 511 aa24.04■■□□□ 1.44
NCL-202ENST00000356936 SPATA31A1Q5TZJ5 1347 aa24.04■■□□□ 1.44
NCL-202ENST00000356936 A0A1W2PP64 1363 aa24.03■■□□□ 1.44
NCL-202ENST00000356936 AATKQ6ZMQ8 1374 aa24.03■■□□□ 1.44
NCL-202ENST00000356936 LMO7Q8WWI1 1683 aa24.03■■□□□ 1.44
NCL-202ENST00000356936 CAMTA1Q9Y6Y1 1673 aa24.03■■□□□ 1.44
NCL-202ENST00000356936 KRT27Q7Z3Y8 459 aa24.03■■□□□ 1.44
NCL-202ENST00000356936 ZBTB7CA1YPR0 619 aa24.02■■□□□ 1.44
NCL-202ENST00000356936 USP31Q70CQ4 1352 aa24.02■■□□□ 1.44
NCL-202ENST00000356936 LARP1Q6PKG0 1096 aaKnown RBP23.99■■□□□ 1.43
NCL-202ENST00000356936 ARHGEF25Q86VW2 580 aa23.99■■□□□ 1.43
NCL-202ENST00000356936 COL5A2P05997 1499 aaPredicted RBP23.99■■□□□ 1.43
NCL-202ENST00000356936 NME9Q86XW9 330 aa23.98■■□□□ 1.43
NCL-202ENST00000356936 SOX12O15370 315 aa23.97■■□□□ 1.43
NCL-202ENST00000356936 BARGINQ6ZT62 677 aa23.97■■□□□ 1.43
NCL-202ENST00000356936 ANKRD36BQ8N2N9 1353 aa23.97■■□□□ 1.43
NCL-202ENST00000356936 USP35Q9P2H5 1018 aa23.97■■□□□ 1.43
NCL-202ENST00000356936 THRAP3Q9Y2W1 955 aaKnown RBP23.97■■□□□ 1.43
NCL-202ENST00000356936 BRWD3Q6RI45 1802 aa23.96■■□□□ 1.43
NCL-202ENST00000356936 TCP11L2Q8N4U5 519 aa23.96■■□□□ 1.43
NCL-202ENST00000356936 USP54Q70EL1 1684 aa23.95■■□□□ 1.43
NCL-202ENST00000356936 THSD7AQ9UPZ6 1657 aa23.95■■□□□ 1.42
NCL-202ENST00000356936 NFAT5O94916 1531 aa23.94■■□□□ 1.42
NCL-202ENST00000356936 BLMP54132 1417 aaPredicted RBP23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms