RNA–Protein interactions for RNA: ENST00000356444.6

SEMA4D-202, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SEMA4D, Length 4,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-202ENST00000356444 SYNE3Q6ZMZ3 975 aa11.87□□□□□ -0.51
SEMA4D-202ENST00000356444 ADCY5O95622 1261 aa11.87□□□□□ -0.51
SEMA4D-202ENST00000356444 ERCC4Q92889 916 aaPredicted RBP11.87□□□□□ -0.51
SEMA4D-202ENST00000356444 NCOA2Q15596 1464 aa11.86□□□□□ -0.51
SEMA4D-202ENST00000356444 EIF2S2P20042 333 aaKnown RBP11.86□□□□□ -0.51
SEMA4D-202ENST00000356444 HSP90AB3PQ58FF7 597 aa11.86□□□□□ -0.51
SEMA4D-202ENST00000356444 TMCO3Q6UWJ1 677 aa11.86□□□□□ -0.51
SEMA4D-202ENST00000356444 LTV1Q96GA3 475 aaPredicted RBP11.86□□□□□ -0.51
SEMA4D-202ENST00000356444 CCDC94Q9BW85 323 aaPredicted RBP11.86□□□□□ -0.51
SEMA4D-202ENST00000356444 TSPYL1Q9H0U9 437 aa11.86□□□□□ -0.51
SEMA4D-202ENST00000356444 PLCD3Q8N3E9 789 aa11.86□□□□□ -0.51
SEMA4D-202ENST00000356444 TIGD1Q96MW7 591 aa11.86□□□□□ -0.51
SEMA4D-202ENST00000356444 NUP62CLQ9H1M0 184 aa11.86□□□□□ -0.51
SEMA4D-202ENST00000356444 NOLC1Q14978 699 aaKnown RBP eCLIP11.86□□□□□ -0.51
SEMA4D-202ENST00000356444 UPF3BQ9BZI7 483 aaKnown RBP11.86□□□□□ -0.51
SEMA4D-202ENST00000356444 NCOA1Q15788 1441 aa11.85□□□□□ -0.51
SEMA4D-202ENST00000356444 CAMK4Q16566 473 aa11.85□□□□□ -0.51
SEMA4D-202ENST00000356444 CPLX2Q6PUV4 134 aaKnown RBP11.85□□□□□ -0.51
SEMA4D-202ENST00000356444 C9orf78Q9NZ63 289 aaPredicted RBP11.85□□□□□ -0.51
SEMA4D-202ENST00000356444 ZNF330Q9Y3S2 320 aaPredicted RBP11.85□□□□□ -0.51
SEMA4D-202ENST00000356444 NUTM2FA1L443 756 aa11.85□□□□□ -0.51
SEMA4D-202ENST00000356444 CCP110O43303 1012 aa11.85□□□□□ -0.51
SEMA4D-202ENST00000356444 LARP1BQ659C4 914 aaKnown RBP11.85□□□□□ -0.51
SEMA4D-202ENST00000356444 SMAP1Q8IYB5 467 aaPredicted RBP11.85□□□□□ -0.51
SEMA4D-202ENST00000356444 PCMTD1Q96MG8 357 aaPredicted RBP11.85□□□□□ -0.51
SEMA4D-202ENST00000356444 LRPPRCP42704 1394 aaKnown RBP11.85□□□□□ -0.51
SEMA4D-202ENST00000356444 MINK1Q8N4C8 1332 aaPredicted RBP11.85□□□□□ -0.51
SEMA4D-202ENST00000356444 GTPBP4Q9BZE4 634 aaKnown RBP11.85□□□□□ -0.51
SEMA4D-202ENST00000356444 AMPHP49418 695 aa11.84□□□□□ -0.51
SEMA4D-202ENST00000356444 SURF6O75683 361 aaKnown RBP11.84□□□□□ -0.51
SEMA4D-202ENST00000356444 ANKRD20A12PQ8NF67 263 aa11.84□□□□□ -0.51
SEMA4D-202ENST00000356444 KIF18AQ8NI77 898 aa11.84□□□□□ -0.51
SEMA4D-202ENST00000356444 FAM177BA6PVY3 158 aa11.84□□□□□ -0.51
SEMA4D-202ENST00000356444 MAP3K11Q16584 847 aa11.84□□□□□ -0.51
SEMA4D-202ENST00000356444 TWISTNBQ3B726 338 aaPredicted RBP11.84□□□□□ -0.51
SEMA4D-202ENST00000356444 CCDC183Q5T5S1 534 aa11.84□□□□□ -0.51
SEMA4D-202ENST00000356444 OLFM4Q6UX06 510 aa11.84□□□□□ -0.51
SEMA4D-202ENST00000356444 ANKRD50Q9ULJ7 1429 aa11.84□□□□□ -0.51
SEMA4D-202ENST00000356444 CALRP27797 417 aaKnown RBP11.83□□□□□ -0.51
SEMA4D-202ENST00000356444 PRIM1P49642 420 aaKnown RBP11.83□□□□□ -0.51
SEMA4D-202ENST00000356444 TTC12Q9H892 705 aaPredicted RBP11.83□□□□□ -0.51
SEMA4D-202ENST00000356444 TRMT1Q9NXH9 659 aaKnown RBP11.83□□□□□ -0.51
SEMA4D-202ENST00000356444 HOOK1Q9UJC3 728 aaKnown RBP11.83□□□□□ -0.51
SEMA4D-202ENST00000356444 FERMT3Q86UX7 667 aa11.83□□□□□ -0.52
SEMA4D-202ENST00000356444 CFTRP13569 1480 aa11.83□□□□□ -0.52
SEMA4D-202ENST00000356444 PSMA5P28066 241 aa11.83□□□□□ -0.52
SEMA4D-202ENST00000356444 TRIM29Q14134 588 aa11.83□□□□□ -0.52
SEMA4D-202ENST00000356444 CLSTN1O94985 981 aa11.82□□□□□ -0.52
SEMA4D-202ENST00000356444 SERPINC1P01008 464 aa11.82□□□□□ -0.52
SEMA4D-202ENST00000356444 CT47B1P0C2W7 299 aaPredicted RBP11.82□□□□□ -0.52
SEMA4D-202ENST00000356444 CNTROBQ8N137 903 aa11.82□□□□□ -0.52
SEMA4D-202ENST00000356444 COG3Q96JB2 828 aa11.82□□□□□ -0.52
SEMA4D-202ENST00000356444 HCLS1P14317 486 aaPredicted RBP11.82□□□□□ -0.52
SEMA4D-202ENST00000356444 LRSAM1Q6UWE0 723 aa11.82□□□□□ -0.52
SEMA4D-202ENST00000356444 SLC12A5Q9H2X9 1139 aa11.82□□□□□ -0.52
SEMA4D-202ENST00000356444 TAF7LQ5H9L4 462 aa11.82□□□□□ -0.52
SEMA4D-202ENST00000356444 CCDC102AQ96A19 550 aa11.82□□□□□ -0.52
SEMA4D-202ENST00000356444 SPATA32Q96LK8 384 aa11.82□□□□□ -0.52
SEMA4D-202ENST00000356444 PCDHB15Q9Y5E8 787 aa11.82□□□□□ -0.52
SEMA4D-202ENST00000356444 NAIPQ13075 1403 aa11.82□□□□□ -0.52
SEMA4D-202ENST00000356444 PRKAR2BP31323 418 aa11.81□□□□□ -0.52
SEMA4D-202ENST00000356444 STK3Q13188 491 aa11.81□□□□□ -0.52
SEMA4D-202ENST00000356444 CAGE1Q8TC20 777 aa11.81□□□□□ -0.52
SEMA4D-202ENST00000356444 EIF3JO75822 258 aaKnown RBP11.81□□□□□ -0.52
SEMA4D-202ENST00000356444 SSH1Q8WYL5 1049 aa11.81□□□□□ -0.52
SEMA4D-202ENST00000356444 CARMIL2Q6F5E8 1435 aa11.81□□□□□ -0.52
SEMA4D-202ENST00000356444 G3BP1Q13283 466 aaKnown RBP eCLIP11.81□□□□□ -0.52
SEMA4D-202ENST00000356444 CFAP70Q5T0N1 1121 aa11.81□□□□□ -0.52
SEMA4D-202ENST00000356444 GPATCH11Q8N954 259 aa11.81□□□□□ -0.52
SEMA4D-202ENST00000356444 NOL10Q9BSC4 688 aaKnown RBP11.81□□□□□ -0.52
SEMA4D-202ENST00000356444 CYP46A1Q9Y6A2 500 aa11.81□□□□□ -0.52
SEMA4D-202ENST00000356444 CASKIN1Q8WXD9 1431 aa11.81□□□□□ -0.52
SEMA4D-202ENST00000356444 UBTFL1P0CB47 393 aaPredicted RBP11.81□□□□□ -0.52
SEMA4D-202ENST00000356444 MLECQ14165 292 aa11.81□□□□□ -0.52
SEMA4D-202ENST00000356444 ERLIN1O75477 346 aa11.8□□□□□ -0.52
SEMA4D-202ENST00000356444 ME1P48163 572 aa11.8□□□□□ -0.52
SEMA4D-202ENST00000356444 KRT222Q8N1A0 295 aa11.8□□□□□ -0.52
SEMA4D-202ENST00000356444 TSPYL4Q9UJ04 414 aa11.8□□□□□ -0.52
SEMA4D-202ENST00000356444 HSP90AB4PQ58FF6 505 aa11.8□□□□□ -0.52
SEMA4D-202ENST00000356444 TBC1D9Q6ZT07 1266 aa11.8□□□□□ -0.52
SEMA4D-202ENST00000356444 HS1BP3Q53T59 392 aa11.8□□□□□ -0.52
SEMA4D-202ENST00000356444 NKTRP30414 1462 aaKnown RBP11.8□□□□□ -0.52
SEMA4D-202ENST00000356444 URI1O94763 535 aaPredicted RBP11.79□□□□□ -0.52
SEMA4D-202ENST00000356444 MAP4K4O95819 1239 aaPredicted RBP11.79□□□□□ -0.52
SEMA4D-202ENST00000356444 CKAP2LQ8IYA6 745 aa11.79□□□□□ -0.52
SEMA4D-202ENST00000356444 RBM42Q9BTD8 480 aaKnown RBP11.79□□□□□ -0.52
SEMA4D-202ENST00000356444 AKAP17AQ02040 695 aaKnown RBP11.79□□□□□ -0.52
SEMA4D-202ENST00000356444 CLASRPQ8N2M8 674 aaKnown RBP11.79□□□□□ -0.52
SEMA4D-202ENST00000356444 IPO4Q8TEX9 1081 aaKnown RBP11.79□□□□□ -0.52
SEMA4D-202ENST00000356444 CLIP2Q9UDT6 1046 aa11.79□□□□□ -0.52
SEMA4D-202ENST00000356444 CUX1P39880 1505 aa11.79□□□□□ -0.52
SEMA4D-202ENST00000356444 KIAA0754O94854 1291 aa11.79□□□□□ -0.52
SEMA4D-202ENST00000356444 USP8P40818 1118 aa11.79□□□□□ -0.52
SEMA4D-202ENST00000356444 BRPF1P55201 1214 aaPredicted RBP11.79□□□□□ -0.52
SEMA4D-202ENST00000356444 NAP1L1P55209 391 aaKnown RBP11.79□□□□□ -0.52
SEMA4D-202ENST00000356444 STK38Q15208 465 aa11.79□□□□□ -0.52
SEMA4D-202ENST00000356444 ZFP91Q96JP5 570 aaPredicted RBP11.79□□□□□ -0.52
SEMA4D-202ENST00000356444 CABP2Q9NPB3 220 aa11.79□□□□□ -0.52
SEMA4D-202ENST00000356444 KIF2AO00139 706 aaPredicted RBP11.79□□□□□ -0.52
SEMA4D-202ENST00000356444 GNAI3P08754 354 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms