RNA–Protein interactions for RNA: ENST00000356205.8

SLC39A1-202, Transcript of solute carrier family 39 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC39A1, Length 2,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-202ENST00000356205 PPP4R2Q9NY27 417 aa21.71■■□□□ 1.07
SLC39A1-202ENST00000356205 RBM33Q96EV2 1170 aaKnown RBP21.7■■□□□ 1.06
SLC39A1-202ENST00000356205 FANCIQ9NVI1 1328 aa21.7■■□□□ 1.06
SLC39A1-202ENST00000356205 RGPD8O14715 1765 aaPredicted RBP21.69■■□□□ 1.06
SLC39A1-202ENST00000356205 PROSER2Q86WR7 435 aaPredicted RBP21.69■■□□□ 1.06
SLC39A1-202ENST00000356205 BLMP54132 1417 aaPredicted RBP21.69■■□□□ 1.06
SLC39A1-202ENST00000356205 C14orf37Q86TY3 774 aa21.68■■□□□ 1.06
SLC39A1-202ENST00000356205 WDR43Q15061 677 aaKnown RBP eCLIP21.68■■□□□ 1.06
SLC39A1-202ENST00000356205 DMRT2Q9Y5R5 561 aa21.68■■□□□ 1.06
SLC39A1-202ENST00000356205 STRCP1A6NGW2 1772 aa21.68■■□□□ 1.06
SLC39A1-202ENST00000356205 SSH2Q76I76 1423 aa21.66■■□□□ 1.06
SLC39A1-202ENST00000356205 NME9Q86XW9 330 aa21.66■■□□□ 1.06
SLC39A1-202ENST00000356205 NCOA3Q9Y6Q9 1424 aa21.66■■□□□ 1.06
SLC39A1-202ENST00000356205 PMFBP1Q8TBY8 1022 aa21.65■■□□□ 1.06
SLC39A1-202ENST00000356205 TTC21BQ7Z4L5 1316 aa21.65■■□□□ 1.06
SLC39A1-202ENST00000356205 SMG6Q86US8 1419 aaKnown RBP21.65■■□□□ 1.06
SLC39A1-202ENST00000356205 MTHFSP49914 203 aa21.65■■□□□ 1.06
SLC39A1-202ENST00000356205 NGDNQ8NEJ9 315 aaKnown RBP21.65■■□□□ 1.06
SLC39A1-202ENST00000356205 CFAP53Q96M91 514 aa21.64■■□□□ 1.05
SLC39A1-202ENST00000356205 ADAMTS8Q9UP79 889 aa21.63■■□□□ 1.05
SLC39A1-202ENST00000356205 TMEM94Q12767 1356 aa21.63■■□□□ 1.05
SLC39A1-202ENST00000356205 TTC21AQ8NDW8 1320 aa21.62■■□□□ 1.05
SLC39A1-202ENST00000356205 SHPRHQ149N8 1683 aa21.62■■□□□ 1.05
SLC39A1-202ENST00000356205 COG3Q96JB2 828 aa21.62■■□□□ 1.05
SLC39A1-202ENST00000356205 DCCP43146 1447 aa21.61■■□□□ 1.05
SLC39A1-202ENST00000356205 C19orf44Q9H6X5 657 aa21.61■■□□□ 1.05
SLC39A1-202ENST00000356205 PHF8Q9UPP1 1060 aa21.6■■□□□ 1.05
SLC39A1-202ENST00000356205 OVOS2A0A0J9YW53 1432 aa21.6■■□□□ 1.05
SLC39A1-202ENST00000356205 OVOS2Q6IE36 1432 aa21.6■■□□□ 1.05
SLC39A1-202ENST00000356205 AATKQ6ZMQ8 1374 aa21.59■■□□□ 1.05
SLC39A1-202ENST00000356205 ZRANB1Q9UGI0 708 aa21.59■■□□□ 1.05
SLC39A1-202ENST00000356205 RNF123Q5XPI4 1314 aa21.58■■□□□ 1.05
SLC39A1-202ENST00000356205 COL3A1P02461 1466 aaPredicted RBP21.58■■□□□ 1.05
SLC39A1-202ENST00000356205 IRX6P78412 446 aaPredicted RBP21.56■■□□□ 1.04
SLC39A1-202ENST00000356205 ESCO1Q5FWF5 840 aa21.56■■□□□ 1.04
SLC39A1-202ENST00000356205 PNPLA6Q8IY17 1366 aa21.55■■□□□ 1.04
SLC39A1-202ENST00000356205 ZNF335Q9H4Z2 1342 aaPredicted RBP21.55■■□□□ 1.04
SLC39A1-202ENST00000356205 USP31Q70CQ4 1352 aa21.55■■□□□ 1.04
SLC39A1-202ENST00000356205 C1orf167Q5SNV9 1468 aa21.55■■□□□ 1.04
SLC39A1-202ENST00000356205 PIK3C2AO00443 1686 aa21.55■■□□□ 1.04
SLC39A1-202ENST00000356205 KIF1AQ12756 1690 aa21.54■■□□□ 1.04
SLC39A1-202ENST00000356205 POLKQ9UBT6 870 aa21.54■■□□□ 1.04
SLC39A1-202ENST00000356205 CDK12Q9NYV4 1490 aaPredicted RBP21.53■■□□□ 1.04
SLC39A1-202ENST00000356205 LTBP4Q8N2S1 1624 aa21.53■■□□□ 1.04
SLC39A1-202ENST00000356205 ATF3P18847 181 aa21.53■■□□□ 1.04
SLC39A1-202ENST00000356205 LRRC7Q96NW7 1537 aa21.53■■□□□ 1.04
SLC39A1-202ENST00000356205 MST1RQ04912 1400 aa21.52■■□□□ 1.04
SLC39A1-202ENST00000356205 MSH6P52701 1360 aa21.52■■□□□ 1.04
SLC39A1-202ENST00000356205 USP54Q70EL1 1684 aa21.52■■□□□ 1.04
SLC39A1-202ENST00000356205 MSH5O43196 834 aa21.51■■□□□ 1.03
SLC39A1-202ENST00000356205 NUDCQ9Y266 331 aa21.51■■□□□ 1.03
SLC39A1-202ENST00000356205 XIRP1Q702N8 1843 aaKnown RBP21.5■■□□□ 1.03
SLC39A1-202ENST00000356205 SENP3-EIF4A1A0A087X0R7 540 aa21.5■■□□□ 1.03
SLC39A1-202ENST00000356205 MAP2P11137 1827 aaKnown RBP21.49■■□□□ 1.03
SLC39A1-202ENST00000356205 CADPS2Q86UW7 1296 aa21.49■■□□□ 1.03
SLC39A1-202ENST00000356205 ORAI2Q96SN7 254 aa21.49■■□□□ 1.03
SLC39A1-202ENST00000356205 FBLN1P23142 703 aa21.49■■□□□ 1.03
SLC39A1-202ENST00000356205 EMILIN1Q9Y6C2 1016 aa21.48■■□□□ 1.03
SLC39A1-202ENST00000356205 DIAPH1O60610 1272 aaKnown RBP21.48■■□□□ 1.03
SLC39A1-202ENST00000356205 PSME1Q06323 249 aa21.48■■□□□ 1.03
SLC39A1-202ENST00000356205 CCDC146Q8IYE0 955 aa21.48■■□□□ 1.03
SLC39A1-202ENST00000356205 PPM1GO15355 546 aaPredicted RBP21.47■■□□□ 1.03
SLC39A1-202ENST00000356205 PAK3O75914 559 aaPredicted RBP21.46■■□□□ 1.03
SLC39A1-202ENST00000356205 RRS1Q15050 365 aaKnown RBP21.46■■□□□ 1.03
SLC39A1-202ENST00000356205 MARF1Q9Y4F3 1742 aaKnown RBP21.45■■□□□ 1.03
SLC39A1-202ENST00000356205 U2AF1L5P0DN76 240 aaPredicted RBP21.45■■□□□ 1.02
SLC39A1-202ENST00000356205 U2AF1Q01081 240 aaKnown RBP eCLIP21.45■■□□□ 1.02
SLC39A1-202ENST00000356205 SALL2Q9Y467 1007 aaPredicted RBP21.45■■□□□ 1.02
SLC39A1-202ENST00000356205 NLRP6P59044 892 aa21.44■■□□□ 1.02
SLC39A1-202ENST00000356205 ABTB2Q8N961 1025 aa21.44■■□□□ 1.02
SLC39A1-202ENST00000356205 CERKQ8TCT0 537 aa21.44■■□□□ 1.02
SLC39A1-202ENST00000356205 PDE3BQ13370 1112 aa21.44■■□□□ 1.02
SLC39A1-202ENST00000356205 RUNDC1Q96C34 613 aa21.43■■□□□ 1.02
SLC39A1-202ENST00000356205 IQSEC2Q5JU85 1478 aa21.43■■□□□ 1.02
SLC39A1-202ENST00000356205 U2SURPO15042 1029 aaKnown RBP21.43■■□□□ 1.02
SLC39A1-202ENST00000356205 FOXO3O43524 673 aa21.43■■□□□ 1.02
SLC39A1-202ENST00000356205 NGEFQ8N5V2 710 aa21.43■■□□□ 1.02
SLC39A1-202ENST00000356205 TRPM3Q9HCF6 1732 aaPredicted RBP21.42■■□□□ 1.02
SLC39A1-202ENST00000356205 APAF1O14727 1248 aa21.41■■□□□ 1.02
SLC39A1-202ENST00000356205 PEAK1Q9H792 1746 aa21.4■■□□□ 1.02
SLC39A1-202ENST00000356205 B4GALNT3Q6L9W6 998 aa21.4■■□□□ 1.02
SLC39A1-202ENST00000356205 SBNO1A3KN83 1393 aa21.38■■□□□ 1.01
SLC39A1-202ENST00000356205 SOX12O15370 315 aa21.38■■□□□ 1.01
SLC39A1-202ENST00000356205 IL13P35225 146 aa21.38■■□□□ 1.01
SLC39A1-202ENST00000356205 NUTM2GQ5VZR2 741 aa21.38■■□□□ 1.01
SLC39A1-202ENST00000356205 MAP3K19Q56UN5 1328 aa21.38■■□□□ 1.01
SLC39A1-202ENST00000356205 ZNF521Q96K83 1311 aa21.38■■□□□ 1.01
SLC39A1-202ENST00000356205 KRT28Q7Z3Y7 464 aa21.38■■□□□ 1.01
SLC39A1-202ENST00000356205 FLT4P35916 1363 aa21.37■■□□□ 1.01
SLC39A1-202ENST00000356205 KIF24Q5T7B8 1368 aa21.37■■□□□ 1.01
SLC39A1-202ENST00000356205 XPCQ01831 940 aaPredicted RBP21.36■■□□□ 1.01
SLC39A1-202ENST00000356205 PNNQ9H307 717 aaKnown RBP21.36■■□□□ 1.01
SLC39A1-202ENST00000356205 NPHP3Q7Z494 1330 aa21.35■■□□□ 1.01
SLC39A1-202ENST00000356205 NFAT5O94916 1531 aa21.35■■□□□ 1.01
SLC39A1-202ENST00000356205 TCP11L2Q8N4U5 519 aa21.35■■□□□ 1.01
SLC39A1-202ENST00000356205 PLEKHF1Q96S99 279 aa21.35■■□□□ 1.01
SLC39A1-202ENST00000356205 SLIT3O75094 1523 aa21.34■■□□□ 1.01
SLC39A1-202ENST00000356205 NCBP3Q53F19 620 aaKnown RBP21.34■■□□□ 1.01
SLC39A1-202ENST00000356205 FCHSD2O94868 740 aa21.33■■□□□ 1.01
SLC39A1-202ENST00000356205 ALS2Q96Q42 1657 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms