RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 IPO4Q8TEX9 1081 aaKnown RBP14.06□□□□□ -0.16
SND1-201ENST00000354725 ADGRF5Q8IZF2 1346 aa14.06□□□□□ -0.16
SND1-201ENST00000354725 FRAT1Q92837 279 aaPredicted RBP14.06□□□□□ -0.16
SND1-201ENST00000354725 CANXP27824 592 aaKnown RBP14.06□□□□□ -0.16
SND1-201ENST00000354725 PDE3BQ13370 1112 aa14.06□□□□□ -0.16
SND1-201ENST00000354725 DISP3Q9P2K9 1392 aa14.05□□□□□ -0.16
SND1-201ENST00000354725 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.05□□□□□ -0.16
SND1-201ENST00000354725 RRP1P56182 461 aaKnown RBP14.05□□□□□ -0.16
SND1-201ENST00000354725 RRAGDQ9NQL2 400 aaPredicted RBP14.05□□□□□ -0.16
SND1-201ENST00000354725 VIRMAQ69YN4 1812 aaKnown RBP14.04□□□□□ -0.16
SND1-201ENST00000354725 TECPR2O15040 1411 aa14.04□□□□□ -0.16
SND1-201ENST00000354725 FAM43BQ6ZT52 329 aaPredicted RBP14.04□□□□□ -0.16
SND1-201ENST00000354725 TXNDC2Q86VQ3 553 aa14.04□□□□□ -0.16
SND1-201ENST00000354725 NLRP13Q86W25 1043 aa14.04□□□□□ -0.16
SND1-201ENST00000354725 PIK3R4Q99570 1358 aa14.04□□□□□ -0.16
SND1-201ENST00000354725 CENPJQ9HC77 1338 aaPredicted RBP14.04□□□□□ -0.16
SND1-201ENST00000354725 METP08581 1390 aa14.03□□□□□ -0.16
SND1-201ENST00000354725 NALCNQ8IZF0 1738 aa14.03□□□□□ -0.16
SND1-201ENST00000354725 DLC1Q96QB1 1528 aa14.03□□□□□ -0.16
SND1-201ENST00000354725 NKTRP30414 1462 aaKnown RBP14.02□□□□□ -0.16
SND1-201ENST00000354725 TMC1Q8TDI8 760 aa14.02□□□□□ -0.16
SND1-201ENST00000354725 STAC3Q96MF2 364 aa14.02□□□□□ -0.16
SND1-201ENST00000354725 DCAF11Q8TEB1 546 aa14.02□□□□□ -0.17
SND1-201ENST00000354725 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.02□□□□□ -0.17
SND1-201ENST00000354725 TBX22Q9Y458 520 aa14.01□□□□□ -0.17
SND1-201ENST00000354725 LRRC7Q96NW7 1537 aa14.01□□□□□ -0.17
SND1-201ENST00000354725 IQSEC2Q5JU85 1478 aa14.01□□□□□ -0.17
SND1-201ENST00000354725 PTCH1Q13635 1447 aa14□□□□□ -0.17
SND1-201ENST00000354725 TICAM2Q86XR7 235 aa14□□□□□ -0.17
SND1-201ENST00000354725 C14orf93Q9H972 538 aaKnown RBP13.99□□□□□ -0.17
SND1-201ENST00000354725 OS9Q13438 667 aaPredicted RBP13.99□□□□□ -0.17
SND1-201ENST00000354725 ADGRB2O60241 1585 aa13.99□□□□□ -0.17
SND1-201ENST00000354725 VGFO15240 615 aaPredicted RBP13.99□□□□□ -0.17
SND1-201ENST00000354725 EID1Q9Y6B2 187 aa13.99□□□□□ -0.17
SND1-201ENST00000354725 FTSJ3Q8IY81 847 aaKnown RBP13.98□□□□□ -0.17
SND1-201ENST00000354725 DMRT2Q9Y5R5 561 aa13.98□□□□□ -0.17
SND1-201ENST00000354725 NUTM2DQ5VT03 806 aaPredicted RBP13.98□□□□□ -0.17
SND1-201ENST00000354725 NBPF1Q3BBV0 1214 aa13.97□□□□□ -0.17
SND1-201ENST00000354725 CNGB1Q14028 1251 aaPredicted RBP13.96□□□□□ -0.17
SND1-201ENST00000354725 PDCL3Q9H2J4 239 aa13.96□□□□□ -0.17
SND1-201ENST00000354725 STAG3Q9UJ98 1225 aa13.96□□□□□ -0.17
SND1-201ENST00000354725 ZNF521Q96K83 1311 aa13.96□□□□□ -0.17
SND1-201ENST00000354725 HDGFP51858 240 aaKnown RBP13.96□□□□□ -0.17
SND1-201ENST00000354725 RGL3Q3MIN7 710 aa13.96□□□□□ -0.17
SND1-201ENST00000354725 PSMD1Q99460 953 aa13.96□□□□□ -0.17
SND1-201ENST00000354725 RCAN3Q9UKA8 241 aa13.96□□□□□ -0.17
SND1-201ENST00000354725 NPC1L1Q9UHC9 1359 aa13.96□□□□□ -0.17
SND1-201ENST00000354725 CHGAP10645 457 aaKnown RBP13.96□□□□□ -0.18
SND1-201ENST00000354725 MS4A1P11836 297 aa13.96□□□□□ -0.18
SND1-201ENST00000354725 PNNQ9H307 717 aaKnown RBP13.96□□□□□ -0.18
SND1-201ENST00000354725 TCERG1O14776 1098 aaKnown RBP13.95□□□□□ -0.18
SND1-201ENST00000354725 ZNF335Q9H4Z2 1342 aaPredicted RBP13.95□□□□□ -0.18
SND1-201ENST00000354725 NCOA3Q9Y6Q9 1424 aa13.95□□□□□ -0.18
SND1-201ENST00000354725 TEX2Q8IWB9 1127 aa13.94□□□□□ -0.18
SND1-201ENST00000354725 YTHDC2Q9H6S0 1430 aaKnown RBP13.94□□□□□ -0.18
SND1-201ENST00000354725 ABCC11Q96J66 1382 aa13.94□□□□□ -0.18
SND1-201ENST00000354725 SOX12O15370 315 aa13.94□□□□□ -0.18
SND1-201ENST00000354725 EXOC6Q8TAG9 804 aa13.94□□□□□ -0.18
SND1-201ENST00000354725 MAPK8IP2Q13387 824 aaPredicted RBP13.93□□□□□ -0.18
SND1-201ENST00000354725 CERS3Q8IU89 383 aa13.93□□□□□ -0.18
SND1-201ENST00000354725 QRICH2Q9H0J4 1663 aa13.93□□□□□ -0.18
SND1-201ENST00000354725 FAM135BQ49AJ0 1406 aa13.93□□□□□ -0.18
SND1-201ENST00000354725 FMN2Q9NZ56 1722 aa13.93□□□□□ -0.18
SND1-201ENST00000354725 USP32Q8NFA0 1604 aa13.92□□□□□ -0.18
SND1-201ENST00000354725 KCNA6P17658 529 aa13.92□□□□□ -0.18
SND1-201ENST00000354725 SLC26A8Q96RN1 970 aa13.92□□□□□ -0.18
SND1-201ENST00000354725 SHPRHQ149N8 1683 aa13.92□□□□□ -0.18
SND1-201ENST00000354725 ROBO2Q9HCK4 1378 aa13.92□□□□□ -0.18
SND1-201ENST00000354725 KDM2BQ8NHM5 1336 aa13.92□□□□□ -0.18
SND1-201ENST00000354725 BACH2Q9BYV9 841 aa13.92□□□□□ -0.18
SND1-201ENST00000354725 TOPAZ1Q8N9V7 1692 aa13.91□□□□□ -0.18
SND1-201ENST00000354725 CDC42BPGQ6DT37 1551 aa13.91□□□□□ -0.18
SND1-201ENST00000354725 PLCD4Q9BRC7 762 aa13.91□□□□□ -0.18
SND1-201ENST00000354725 CFAP70Q5T0N1 1121 aa13.91□□□□□ -0.18
SND1-201ENST00000354725 SIRT1Q96EB6 747 aa13.91□□□□□ -0.18
SND1-201ENST00000354725 HMGB1P09429 215 aaKnown RBP13.9□□□□□ -0.18
SND1-201ENST00000354725 NFKBIBQ15653 356 aa13.9□□□□□ -0.18
SND1-201ENST00000354725 CDCA7LQ96GN5 454 aa13.88□□□□□ -0.19
SND1-201ENST00000354725 PLEKHH1Q9ULM0 1364 aa13.88□□□□□ -0.19
SND1-201ENST00000354725 TRMT2AQ8IZ69 625 aaKnown RBP13.88□□□□□ -0.19
SND1-201ENST00000354725 NECTIN2Q92692 538 aa13.88□□□□□ -0.19
SND1-201ENST00000354725 PRDM16Q9HAZ2 1276 aa13.88□□□□□ -0.19
SND1-201ENST00000354725 CLCN1P35523 988 aa13.87□□□□□ -0.19
SND1-201ENST00000354725 RGPD8O14715 1765 aaPredicted RBP13.87□□□□□ -0.19
SND1-201ENST00000354725 PANK3Q9H999 370 aa13.87□□□□□ -0.19
SND1-201ENST00000354725 DCCP43146 1447 aa13.86□□□□□ -0.19
SND1-201ENST00000354725 PDE4AP27815 886 aa13.86□□□□□ -0.19
SND1-201ENST00000354725 FAM193AP78312 1265 aa13.86□□□□□ -0.19
SND1-201ENST00000354725 TMF1P82094 1093 aa13.85□□□□□ -0.19
SND1-201ENST00000354725 AMOTL2Q9Y2J4 779 aa13.85□□□□□ -0.19
SND1-201ENST00000354725 ADGRL3Q9HAR2 1447 aa13.85□□□□□ -0.19
SND1-201ENST00000354725 VGLL3A8MV65 326 aa13.84□□□□□ -0.19
SND1-201ENST00000354725 TMEM132EQ6IEE7 984 aa13.84□□□□□ -0.19
SND1-201ENST00000354725 TULP4Q9NRJ4 1543 aa13.84□□□□□ -0.19
SND1-201ENST00000354725 DUSP27Q5VZP5 1158 aa13.84□□□□□ -0.19
SND1-201ENST00000354725 ZNF692Q9BU19 519 aaPredicted RBP13.84□□□□□ -0.19
SND1-201ENST00000354725 NHSL1Q5SYE7 1610 aa13.83□□□□□ -0.2
SND1-201ENST00000354725 TMEM94Q12767 1356 aa13.83□□□□□ -0.2
SND1-201ENST00000354725 PTMSP20962 102 aa13.83□□□□□ -0.2
SND1-201ENST00000354725 CLSTN1O94985 981 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms