RNA–Protein interactions for RNA: ENST00000354571.5

TWIST1-202, Transcript of twist family bHLH transcription factor 1, humanhuman

TSL 2

Gene TWIST1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TWIST1-202ENST00000354571 PSME1Q06323 249 aa30.65■■■□□ 2.5
TWIST1-202ENST00000354571 CNGB1Q14028 1251 aaPredicted RBP30.65■■■□□ 2.5
TWIST1-202ENST00000354571 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.65■■■□□ 2.5
TWIST1-202ENST00000354571 ANKRD26Q9UPS8 1709 aa30.64■■■□□ 2.5
TWIST1-202ENST00000354571 FOXO3O43524 673 aa30.64■■■□□ 2.5
TWIST1-202ENST00000354571 BRINP3Q76B58 766 aa30.64■■■□□ 2.5
TWIST1-202ENST00000354571 NPHP3Q7Z494 1330 aa30.61■■■□□ 2.49
TWIST1-202ENST00000354571 GGNBP2Q9H3C7 697 aa30.59■■■□□ 2.49
TWIST1-202ENST00000354571 KRT28Q7Z3Y7 464 aa30.58■■■□□ 2.49
TWIST1-202ENST00000354571 MORC1Q86VD1 984 aa30.58■■■□□ 2.49
TWIST1-202ENST00000354571 NME9Q86XW9 330 aa30.58■■■□□ 2.49
TWIST1-202ENST00000354571 CERKQ8TCT0 537 aa30.58■■■□□ 2.49
TWIST1-202ENST00000354571 TRPM3Q9HCF6 1732 aaPredicted RBP30.58■■■□□ 2.49
TWIST1-202ENST00000354571 MYBBP1AQ9BQG0 1328 aaKnown RBP30.57■■■□□ 2.48
TWIST1-202ENST00000354571 TOM1O60784 492 aa30.57■■■□□ 2.48
TWIST1-202ENST00000354571 CCER2I3L3R5 266 aa30.56■■■□□ 2.48
TWIST1-202ENST00000354571 PIK3C2AO00443 1686 aa30.55■■■□□ 2.48
TWIST1-202ENST00000354571 USP31Q70CQ4 1352 aa30.54■■■□□ 2.48
TWIST1-202ENST00000354571 NHSL1Q5SYE7 1610 aa30.54■■■□□ 2.48
TWIST1-202ENST00000354571 USP54Q70EL1 1684 aa30.53■■■□□ 2.48
TWIST1-202ENST00000354571 ROBO1Q9Y6N7 1651 aa30.53■■■□□ 2.48
TWIST1-202ENST00000354571 PXDNQ92626 1479 aa30.53■■■□□ 2.48
TWIST1-202ENST00000354571 PAK3O75914 559 aaPredicted RBP30.53■■■□□ 2.48
TWIST1-202ENST00000354571 COG3Q96JB2 828 aa30.53■■■□□ 2.48
TWIST1-202ENST00000354571 SBNO1A3KN83 1393 aa30.53■■■□□ 2.48
TWIST1-202ENST00000354571 OVOS2A0A0J9YW53 1432 aa30.52■■■□□ 2.48
TWIST1-202ENST00000354571 OVOS2Q6IE36 1432 aa30.52■■■□□ 2.48
TWIST1-202ENST00000354571 XPCQ01831 940 aaPredicted RBP30.51■■■□□ 2.47
TWIST1-202ENST00000354571 SCAF1Q9H7N4 1312 aaKnown RBP30.5■■■□□ 2.47
TWIST1-202ENST00000354571 PPP2R1AP30153 589 aa30.49■■■□□ 2.47
TWIST1-202ENST00000354571 ABTB2Q8N961 1025 aa30.49■■■□□ 2.47
TWIST1-202ENST00000354571 DDX17Q92841 729 aaKnown RBP30.49■■■□□ 2.47
TWIST1-202ENST00000354571 ZRANB1Q9UGI0 708 aa30.49■■■□□ 2.47
TWIST1-202ENST00000354571 NLRP13Q86W25 1043 aa30.48■■■□□ 2.47
TWIST1-202ENST00000354571 SOS2Q07890 1332 aaPredicted RBP30.47■■■□□ 2.47
TWIST1-202ENST00000354571 ALS2Q96Q42 1657 aa30.47■■■□□ 2.47
TWIST1-202ENST00000354571 UBAP1LF5GYI3 381 aa30.46■■■□□ 2.47
TWIST1-202ENST00000354571 AHDC1Q5TGY3 1603 aaPredicted RBP30.46■■■□□ 2.47
TWIST1-202ENST00000354571 NLRP6P59044 892 aa30.45■■■□□ 2.47
TWIST1-202ENST00000354571 MARF1Q9Y4F3 1742 aaKnown RBP30.44■■■□□ 2.46
TWIST1-202ENST00000354571 TNS3Q68CZ2 1445 aa30.44■■■□□ 2.46
TWIST1-202ENST00000354571 TNNT2P45379 298 aaPredicted RBP30.43■■■□□ 2.46
TWIST1-202ENST00000354571 AATKQ6ZMQ8 1374 aa30.42■■■□□ 2.46
TWIST1-202ENST00000354571 SPATA31A3Q5VYP0 1347 aa30.42■■■□□ 2.46
TWIST1-202ENST00000354571 ARHGEF10O15013 1369 aa30.4■■■□□ 2.46
TWIST1-202ENST00000354571 NUTM2GQ5VZR2 741 aa30.39■■■□□ 2.46
TWIST1-202ENST00000354571 LMOD2Q6P5Q4 547 aa30.38■■■□□ 2.45
TWIST1-202ENST00000354571 MRS2Q9HD23 443 aa30.38■■■□□ 2.45
TWIST1-202ENST00000354571 PIP4K2BP78356 416 aa30.37■■■□□ 2.45
TWIST1-202ENST00000354571 CCDC184Q52MB2 194 aa30.36■■■□□ 2.45
TWIST1-202ENST00000354571 USP19O94966 1318 aa30.35■■■□□ 2.45
TWIST1-202ENST00000354571 SLIT3O75094 1523 aa30.35■■■□□ 2.45
TWIST1-202ENST00000354571 MTHFSP49914 203 aa30.33■■■□□ 2.45
TWIST1-202ENST00000354571 KCNH5Q8NCM2 988 aa30.33■■■□□ 2.45
TWIST1-202ENST00000354571 MAP2P11137 1827 aaKnown RBP30.33■■■□□ 2.45
TWIST1-202ENST00000354571 MED1Q15648 1581 aaPredicted RBP30.32■■■□□ 2.45
TWIST1-202ENST00000354571 SMG6Q86US8 1419 aaKnown RBP30.32■■■□□ 2.44
TWIST1-202ENST00000354571 PHLPP1O60346 1717 aa30.32■■■□□ 2.44
TWIST1-202ENST00000354571 LRRC59Q96AG4 307 aaKnown RBP30.31■■■□□ 2.44
TWIST1-202ENST00000354571 POLKQ9UBT6 870 aa30.31■■■□□ 2.44
TWIST1-202ENST00000354571 NFAT5O94916 1531 aa30.29■■■□□ 2.44
TWIST1-202ENST00000354571 FBLN1P23142 703 aa30.28■■■□□ 2.44
TWIST1-202ENST00000354571 CFAP53Q96M91 514 aa30.28■■■□□ 2.44
TWIST1-202ENST00000354571 COL16A1Q07092 1604 aaPredicted RBP30.28■■■□□ 2.44
TWIST1-202ENST00000354571 CRYBG1Q9Y4K1 1723 aa30.27■■■□□ 2.44
TWIST1-202ENST00000354571 PHRF1Q9P1Y6 1649 aaKnown RBP30.26■■■□□ 2.44
TWIST1-202ENST00000354571 CDK12Q9NYV4 1490 aaPredicted RBP30.25■■■□□ 2.43
TWIST1-202ENST00000354571 SOX12O15370 315 aa30.25■■■□□ 2.43
TWIST1-202ENST00000354571 GCP02774 474 aa30.25■■■□□ 2.43
TWIST1-202ENST00000354571 RRS1Q15050 365 aaKnown RBP30.25■■■□□ 2.43
TWIST1-202ENST00000354571 INSRP06213 1382 aa30.25■■■□□ 2.43
TWIST1-202ENST00000354571 EMILIN1Q9Y6C2 1016 aa30.24■■■□□ 2.43
TWIST1-202ENST00000354571 KIF24Q5T7B8 1368 aa30.24■■■□□ 2.43
TWIST1-202ENST00000354571 PNPLA6Q8IY17 1366 aa30.24■■■□□ 2.43
TWIST1-202ENST00000354571 PNISRQ8TF01 805 aaKnown RBP30.23■■■□□ 2.43
TWIST1-202ENST00000354571 MAP3K19Q56UN5 1328 aa30.22■■■□□ 2.43
TWIST1-202ENST00000354571 COL22A1Q8NFW1 1626 aaPredicted RBP30.21■■■□□ 2.43
TWIST1-202ENST00000354571 COL3A1P02461 1466 aaPredicted RBP30.2■■■□□ 2.43
TWIST1-202ENST00000354571 PEAK1Q9H792 1746 aa30.2■■■□□ 2.43
TWIST1-202ENST00000354571 PPM1GO15355 546 aaPredicted RBP30.2■■■□□ 2.43
TWIST1-202ENST00000354571 LTN1O94822 1766 aa30.2■■■□□ 2.42
TWIST1-202ENST00000354571 ABCA3Q99758 1704 aa30.19■■■□□ 2.42
TWIST1-202ENST00000354571 RTL1A6NKG5 1358 aa30.18■■■□□ 2.42
TWIST1-202ENST00000354571 FLT4P35916 1363 aa30.18■■■□□ 2.42
TWIST1-202ENST00000354571 PLEKHG5O94827 1062 aa30.17■■■□□ 2.42
TWIST1-202ENST00000354571 CABLES1Q8TDN4 633 aa30.17■■■□□ 2.42
TWIST1-202ENST00000354571 AMPHP49418 695 aa30.16■■■□□ 2.42
TWIST1-202ENST00000354571 ARHGEF25Q86VW2 580 aa30.16■■■□□ 2.42
TWIST1-202ENST00000354571 SHPRHQ149N8 1683 aa30.16■■■□□ 2.42
TWIST1-202ENST00000354571 DIAPH1O60610 1272 aaKnown RBP30.14■■■□□ 2.42
TWIST1-202ENST00000354571 FAM9BQ8IZU0 186 aa30.14■■■□□ 2.42
TWIST1-202ENST00000354571 CPDO75976 1380 aa30.13■■■□□ 2.41
TWIST1-202ENST00000354571 HOXC9P31274 260 aa30.12■■■□□ 2.41
TWIST1-202ENST00000354571 WDR43Q15061 677 aaKnown RBP eCLIP30.12■■■□□ 2.41
TWIST1-202ENST00000354571 IP6K1Q92551 441 aa30.11■■■□□ 2.41
TWIST1-202ENST00000354571 NUDCQ9Y266 331 aa30.11■■■□□ 2.41
TWIST1-202ENST00000354571 ABCC6O95255 1503 aa30.11■■■□□ 2.41
TWIST1-202ENST00000354571 HAP1P54257 671 aaPredicted RBP30.1■■■□□ 2.41
TWIST1-202ENST00000354571 ZC3H6P61129 1189 aaKnown RBP30.1■■■□□ 2.41
TWIST1-202ENST00000354571 HSP90AB2PQ58FF8 381 aa30.09■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms