RNA–Protein interactions for RNA: ENST00000353855.6

DNMT3B-204, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 5 BASIC

Gene DNMT3B, Length 4,237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-204ENST00000353855 ERICH4A6NGS2 130 aa17.21■□□□□ 0.35
DNMT3B-204ENST00000353855 ZKSCAN5Q9Y2L8 839 aa17.21■□□□□ 0.35
DNMT3B-204ENST00000353855 RAB3GAP1Q15042 981 aa17.21■□□□□ 0.35
DNMT3B-204ENST00000353855 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.21■□□□□ 0.35
DNMT3B-204ENST00000353855 CCAR2Q8N163 923 aaKnown RBP17.2■□□□□ 0.34
DNMT3B-204ENST00000353855 NECTIN2Q92692 538 aa17.2■□□□□ 0.34
DNMT3B-204ENST00000353855 MINK1Q8N4C8 1332 aaPredicted RBP17.2■□□□□ 0.34
DNMT3B-204ENST00000353855 BICD2Q8TD16 824 aa17.2■□□□□ 0.34
DNMT3B-204ENST00000353855 SPATA31E1Q6ZUB1 1445 aa17.2■□□□□ 0.34
DNMT3B-204ENST00000353855 HTATSF1O43719 755 aaKnown RBP17.2■□□□□ 0.34
DNMT3B-204ENST00000353855 FSD2A1L4K1 749 aa17.2■□□□□ 0.34
DNMT3B-204ENST00000353855 EVC2Q86UK5 1308 aa17.19■□□□□ 0.34
DNMT3B-204ENST00000353855 HSP90B1P14625 803 aaKnown RBP17.19■□□□□ 0.34
DNMT3B-204ENST00000353855 BBXQ8WY36 941 aaPredicted RBP17.19■□□□□ 0.34
DNMT3B-204ENST00000353855 GNL2Q13823 731 aaKnown RBP17.18■□□□□ 0.34
DNMT3B-204ENST00000353855 AFAP1Q8N556 730 aa17.18■□□□□ 0.34
DNMT3B-204ENST00000353855 LMOD3Q0VAK6 560 aa17.18■□□□□ 0.34
DNMT3B-204ENST00000353855 UPF3BQ9BZI7 483 aaKnown RBP17.18■□□□□ 0.34
DNMT3B-204ENST00000353855 SYNJ2O15056 1496 aa17.18■□□□□ 0.34
DNMT3B-204ENST00000353855 PRKAR2BP31323 418 aa17.18■□□□□ 0.34
DNMT3B-204ENST00000353855 TRERF1Q96PN7 1200 aa17.17■□□□□ 0.34
DNMT3B-204ENST00000353855 CCDC66A2RUB6 948 aa17.17■□□□□ 0.34
DNMT3B-204ENST00000353855 THUMPD2Q9BTF0 503 aaKnown RBP17.17■□□□□ 0.34
DNMT3B-204ENST00000353855 ERC2O15083 957 aa17.17■□□□□ 0.34
DNMT3B-204ENST00000353855 SMC5Q8IY18 1101 aa17.17■□□□□ 0.34
DNMT3B-204ENST00000353855 RBSNQ9H1K0 784 aa17.17■□□□□ 0.34
DNMT3B-204ENST00000353855 ANTXR1Q9H6X2 564 aa17.17■□□□□ 0.34
DNMT3B-204ENST00000353855 TTC12Q9H892 705 aaPredicted RBP17.17■□□□□ 0.34
DNMT3B-204ENST00000353855 GNAI1P63096 354 aa17.16■□□□□ 0.34
DNMT3B-204ENST00000353855 HOMER1Q86YM7 354 aa17.16■□□□□ 0.34
DNMT3B-204ENST00000353855 TSC1Q92574 1164 aa17.16■□□□□ 0.34
DNMT3B-204ENST00000353855 TESK2Q96S53 571 aa17.16■□□□□ 0.34
DNMT3B-204ENST00000353855 ARHGEF11O15085 1522 aa17.16■□□□□ 0.34
DNMT3B-204ENST00000353855 ARHGAP5Q13017 1502 aa17.16■□□□□ 0.34
DNMT3B-204ENST00000353855 SMARCA5O60264 1052 aaPredicted RBP17.16■□□□□ 0.34
DNMT3B-204ENST00000353855 CCDC112Q8NEF3 446 aa17.16■□□□□ 0.34
DNMT3B-204ENST00000353855 TMPOP42166 694 aaKnown RBP17.15■□□□□ 0.34
DNMT3B-204ENST00000353855 BMP2KLQ5H9B9 411 aa17.15■□□□□ 0.34
DNMT3B-204ENST00000353855 ERBB4Q15303 1308 aa17.15■□□□□ 0.34
DNMT3B-204ENST00000353855 TWISTNBQ3B726 338 aaPredicted RBP17.15■□□□□ 0.34
DNMT3B-204ENST00000353855 RALGAPBQ86X10 1494 aa17.15■□□□□ 0.34
DNMT3B-204ENST00000353855 TEX14Q8IWB6 1497 aa17.15■□□□□ 0.34
DNMT3B-204ENST00000353855 SNX21Q969T3 373 aa17.14■□□□□ 0.33
DNMT3B-204ENST00000353855 CTTNBP2Q8WZ74 1663 aa17.14■□□□□ 0.33
DNMT3B-204ENST00000353855 H3BQV1 296 aa17.14■□□□□ 0.33
DNMT3B-204ENST00000353855 IFFO2Q5TF58 517 aa17.14■□□□□ 0.33
DNMT3B-204ENST00000353855 MCM5P33992 734 aa17.13■□□□□ 0.33
DNMT3B-204ENST00000353855 TCOF1Q13428 1488 aaKnown RBP17.13■□□□□ 0.33
DNMT3B-204ENST00000353855 LRSAM1Q6UWE0 723 aa17.13■□□□□ 0.33
DNMT3B-204ENST00000353855 CT47B1P0C2W7 299 aaPredicted RBP17.13■□□□□ 0.33
DNMT3B-204ENST00000353855 FOSBP53539 338 aa17.13■□□□□ 0.33
DNMT3B-204ENST00000353855 ADCY5O95622 1261 aa17.13■□□□□ 0.33
DNMT3B-204ENST00000353855 GORABQ5T7V8 394 aa17.13■□□□□ 0.33
DNMT3B-204ENST00000353855 GPRASP1Q5JY77 1395 aa17.12■□□□□ 0.33
DNMT3B-204ENST00000353855 MCM2P49736 904 aa17.12■□□□□ 0.33
DNMT3B-204ENST00000353855 STAC3Q96MF2 364 aa17.12■□□□□ 0.33
DNMT3B-204ENST00000353855 ZNF608Q9ULD9 1512 aaPredicted RBP17.12■□□□□ 0.33
DNMT3B-204ENST00000353855 WDR33Q9C0J8 1336 aaKnown RBP17.12■□□□□ 0.33
DNMT3B-204ENST00000353855 HCLS1P14317 486 aaPredicted RBP17.11■□□□□ 0.33
DNMT3B-204ENST00000353855 NOLC1Q14978 699 aaKnown RBP eCLIP17.11■□□□□ 0.33
DNMT3B-204ENST00000353855 ZGPATQ8N5A5 531 aaKnown RBP17.11■□□□□ 0.33
DNMT3B-204ENST00000353855 CCDC94Q9BW85 323 aaPredicted RBP17.11■□□□□ 0.33
DNMT3B-204ENST00000353855 NOL7Q9UMY1 257 aaKnown RBP17.11■□□□□ 0.33
DNMT3B-204ENST00000353855 TPM3P06753 285 aa17.11■□□□□ 0.33
DNMT3B-204ENST00000353855 HDAC1Q13547 482 aaPredicted RBP17.11■□□□□ 0.33
DNMT3B-204ENST00000353855 FAM184AQ8NB25 1140 aa17.11■□□□□ 0.33
DNMT3B-204ENST00000353855 C16orf45Q96MC5 204 aaPredicted RBP17.11■□□□□ 0.33
DNMT3B-204ENST00000353855 NUTM2FA1L443 756 aa17.1■□□□□ 0.33
DNMT3B-204ENST00000353855 TEX35Q5T0J7 233 aa17.1■□□□□ 0.33
DNMT3B-204ENST00000353855 NUCB1Q02818 461 aa17.1■□□□□ 0.33
DNMT3B-204ENST00000353855 USP19O94966 1318 aa17.1■□□□□ 0.33
DNMT3B-204ENST00000353855 NSD3Q9BZ95 1437 aa17.1■□□□□ 0.33
DNMT3B-204ENST00000353855 MAGI1Q96QZ7 1491 aaPredicted RBP17.1■□□□□ 0.33
DNMT3B-204ENST00000353855 LETM1O95202 739 aaPredicted RBP17.1■□□□□ 0.33
DNMT3B-204ENST00000353855 SF3A1Q15459 793 aaKnown RBP17.1■□□□□ 0.33
DNMT3B-204ENST00000353855 LARP6Q9BRS8 491 aaKnown RBP17.1■□□□□ 0.33
DNMT3B-204ENST00000353855 GPATCH8Q9UKJ3 1502 aaKnown RBP17.1■□□□□ 0.33
DNMT3B-204ENST00000353855 CCDC192P0DO97 292 aa17.1■□□□□ 0.33
DNMT3B-204ENST00000353855 SMAP1Q8IYB5 467 aaPredicted RBP17.1■□□□□ 0.33
DNMT3B-204ENST00000353855 C17orf53Q8N3J3 647 aaPredicted RBP17.09■□□□□ 0.33
DNMT3B-204ENST00000353855 TPM4P67936 248 aa17.09■□□□□ 0.33
DNMT3B-204ENST00000353855 FKBP5Q13451 457 aaPredicted RBP17.09■□□□□ 0.33
DNMT3B-204ENST00000353855 GRIN2AQ12879 1464 aa17.09■□□□□ 0.33
DNMT3B-204ENST00000353855 MAP4K4O95819 1239 aaPredicted RBP17.08■□□□□ 0.32
DNMT3B-204ENST00000353855 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.08■□□□□ 0.32
DNMT3B-204ENST00000353855 ZKSCAN1P17029 563 aaPredicted RBP17.08■□□□□ 0.32
DNMT3B-204ENST00000353855 CAMK4Q16566 473 aa17.08■□□□□ 0.32
DNMT3B-204ENST00000353855 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.08■□□□□ 0.32
DNMT3B-204ENST00000353855 MLECQ14165 292 aa17.07■□□□□ 0.32
DNMT3B-204ENST00000353855 PRIMPOLQ96LW4 560 aa17.07■□□□□ 0.32
DNMT3B-204ENST00000353855 MNS1Q8NEH6 495 aa17.07■□□□□ 0.32
DNMT3B-204ENST00000353855 HS1BP3Q53T59 392 aa17.07■□□□□ 0.32
DNMT3B-204ENST00000353855 NUP153P49790 1475 aaKnown RBP17.07■□□□□ 0.32
DNMT3B-204ENST00000353855 FILIP1Q7Z7B0 1213 aa17.06■□□□□ 0.32
DNMT3B-204ENST00000353855 CEBPZQ03701 1054 aaKnown RBP17.06■□□□□ 0.32
DNMT3B-204ENST00000353855 PDE4CQ08493 712 aa17.06■□□□□ 0.32
DNMT3B-204ENST00000353855 CCDC9Q9Y3X0 531 aaKnown RBP17.06■□□□□ 0.32
DNMT3B-204ENST00000353855 FERMT3Q86UX7 667 aa17.05■□□□□ 0.32
DNMT3B-204ENST00000353855 FMNL2Q96PY5 1086 aa17.05■□□□□ 0.32
DNMT3B-204ENST00000353855 EXOC6BQ9Y2D4 811 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms