RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 TNPO1Q92973 898 aaKnown RBP12.94□□□□□ -0.34
CHRNA1-202ENST00000348749 ADGRB2O60241 1585 aa12.93□□□□□ -0.34
CHRNA1-202ENST00000348749 PPRC1Q5VV67 1664 aaKnown RBP12.93□□□□□ -0.34
CHRNA1-202ENST00000348749 NSD3Q9BZ95 1437 aa12.93□□□□□ -0.34
CHRNA1-202ENST00000348749 MORC1Q86VD1 984 aa12.93□□□□□ -0.34
CHRNA1-202ENST00000348749 AFAP1Q8N556 730 aa12.93□□□□□ -0.34
CHRNA1-202ENST00000348749 CFAP53Q96M91 514 aa12.93□□□□□ -0.34
CHRNA1-202ENST00000348749 DMRT2Q9Y5R5 561 aa12.93□□□□□ -0.34
CHRNA1-202ENST00000348749 RPGRIP1LQ68CZ1 1315 aa12.93□□□□□ -0.34
CHRNA1-202ENST00000348749 ADGRF5Q8IZF2 1346 aa12.93□□□□□ -0.34
CHRNA1-202ENST00000348749 MSNP26038 577 aaKnown RBP12.92□□□□□ -0.34
CHRNA1-202ENST00000348749 PLEKHG5O94827 1062 aa12.92□□□□□ -0.34
CHRNA1-202ENST00000348749 RBM25P49756 843 aaKnown RBP12.92□□□□□ -0.34
CHRNA1-202ENST00000348749 MFAP1P55081 439 aaKnown RBP12.92□□□□□ -0.34
CHRNA1-202ENST00000348749 ARHGAP31Q2M1Z3 1444 aa12.92□□□□□ -0.34
CHRNA1-202ENST00000348749 ADGRB1O14514 1584 aa12.91□□□□□ -0.34
CHRNA1-202ENST00000348749 NASPP49321 788 aaPredicted RBP12.91□□□□□ -0.34
CHRNA1-202ENST00000348749 ANP32BQ92688 251 aaKnown RBP12.91□□□□□ -0.34
CHRNA1-202ENST00000348749 KIF3BO15066 747 aa12.9□□□□□ -0.34
CHRNA1-202ENST00000348749 RBM10P98175 930 aaKnown RBP12.9□□□□□ -0.34
CHRNA1-202ENST00000348749 TCP11L2Q8N4U5 519 aa12.9□□□□□ -0.34
CHRNA1-202ENST00000348749 ZNF500O60304 480 aaPredicted RBP12.9□□□□□ -0.34
CHRNA1-202ENST00000348749 CLEC17AQ6ZS10 378 aa12.9□□□□□ -0.34
CHRNA1-202ENST00000348749 UGGT1Q9NYU2 1555 aa12.89□□□□□ -0.35
CHRNA1-202ENST00000348749 RLBP1P12271 317 aa12.89□□□□□ -0.35
CHRNA1-202ENST00000348749 C14orf93Q9H972 538 aaKnown RBP12.89□□□□□ -0.35
CHRNA1-202ENST00000348749 KIDINS220Q9ULH0 1771 aa12.89□□□□□ -0.35
CHRNA1-202ENST00000348749 NOS1P29475 1434 aa12.88□□□□□ -0.35
CHRNA1-202ENST00000348749 DYNC1I1O14576 645 aa12.87□□□□□ -0.35
CHRNA1-202ENST00000348749 MVPQ14764 893 aaKnown RBP12.87□□□□□ -0.35
CHRNA1-202ENST00000348749 NOL7Q9UMY1 257 aaKnown RBP12.87□□□□□ -0.35
CHRNA1-202ENST00000348749 ANKRD36BQ8N2N9 1353 aa12.87□□□□□ -0.35
CHRNA1-202ENST00000348749 CFAP74Q9C0B2 1584 aa12.87□□□□□ -0.35
CHRNA1-202ENST00000348749 KLHL40Q2TBA0 621 aa12.87□□□□□ -0.35
CHRNA1-202ENST00000348749 ABCC11Q96J66 1382 aa12.86□□□□□ -0.35
CHRNA1-202ENST00000348749 HDAC1Q13547 482 aaPredicted RBP12.86□□□□□ -0.35
CHRNA1-202ENST00000348749 ZKSCAN2Q63HK3 967 aa12.86□□□□□ -0.35
CHRNA1-202ENST00000348749 FAM13BQ9NYF5 915 aa12.86□□□□□ -0.35
CHRNA1-202ENST00000348749 R3HCC1Q9Y3T6 440 aaKnown RBP12.86□□□□□ -0.35
CHRNA1-202ENST00000348749 IL16Q14005 1332 aa12.86□□□□□ -0.35
CHRNA1-202ENST00000348749 ZNF445P59923 1031 aa12.85□□□□□ -0.35
CHRNA1-202ENST00000348749 GOLGA6L22H0YM25 854 aa12.85□□□□□ -0.35
CHRNA1-202ENST00000348749 HSP90AB1P08238 724 aaKnown RBP12.85□□□□□ -0.35
CHRNA1-202ENST00000348749 CSPP1Q1MSJ5 1256 aa12.85□□□□□ -0.35
CHRNA1-202ENST00000348749 UTP14CQ5TAP6 766 aaKnown RBP12.85□□□□□ -0.35
CHRNA1-202ENST00000348749 PDLIM2Q96JY6 352 aa12.85□□□□□ -0.35
CHRNA1-202ENST00000348749 UQCRHLA0A096LP55 91 aa12.84□□□□□ -0.35
CHRNA1-202ENST00000348749 MED14O60244 1454 aa12.84□□□□□ -0.35
CHRNA1-202ENST00000348749 UQCRHP07919 91 aa12.84□□□□□ -0.35
CHRNA1-202ENST00000348749 MCM5P33992 734 aa12.84□□□□□ -0.35
CHRNA1-202ENST00000348749 ARHGEF28Q8N1W1 1705 aaKnown RBP12.84□□□□□ -0.35
CHRNA1-202ENST00000348749 TNNQ9UQP3 1299 aa12.84□□□□□ -0.35
CHRNA1-202ENST00000348749 ANKRD26Q9UPS8 1709 aa12.84□□□□□ -0.35
CHRNA1-202ENST00000348749 GLI2P10070 1586 aa12.84□□□□□ -0.35
CHRNA1-202ENST00000348749 HECW2Q9P2P5 1572 aa12.84□□□□□ -0.35
CHRNA1-202ENST00000348749 EVC2Q86UK5 1308 aa12.83□□□□□ -0.35
CHRNA1-202ENST00000348749 MTHFSP49914 203 aa12.83□□□□□ -0.35
CHRNA1-202ENST00000348749 DZIP1LQ8IYY4 767 aaKnown RBP12.83□□□□□ -0.35
CHRNA1-202ENST00000348749 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.83□□□□□ -0.36
CHRNA1-202ENST00000348749 DDX19BQ9UMR2 479 aa12.83□□□□□ -0.36
CHRNA1-202ENST00000348749 PIK3C2BO00750 1634 aa12.83□□□□□ -0.36
CHRNA1-202ENST00000348749 FTSJ3Q8IY81 847 aaKnown RBP12.81□□□□□ -0.36
CHRNA1-202ENST00000348749 SLC12A5Q9H2X9 1139 aa12.81□□□□□ -0.36
CHRNA1-202ENST00000348749 MLH3Q9UHC1 1453 aa12.81□□□□□ -0.36
CHRNA1-202ENST00000348749 NPATQ14207 1427 aa12.81□□□□□ -0.36
CHRNA1-202ENST00000348749 ZKSCAN5Q9Y2L8 839 aa12.81□□□□□ -0.36
CHRNA1-202ENST00000348749 TULP4Q9NRJ4 1543 aa12.81□□□□□ -0.36
CHRNA1-202ENST00000348749 ZFYVE9O95405 1425 aa12.81□□□□□ -0.36
CHRNA1-202ENST00000348749 K7ELQ4 463 aaPredicted RBP12.8□□□□□ -0.36
CHRNA1-202ENST00000348749 DMTNQ08495 405 aa12.8□□□□□ -0.36
CHRNA1-202ENST00000348749 SASS6Q6UVJ0 657 aa12.8□□□□□ -0.36
CHRNA1-202ENST00000348749 KIF2CQ99661 725 aa12.8□□□□□ -0.36
CHRNA1-202ENST00000348749 DDX49Q9Y6V7 483 aaKnown RBP12.8□□□□□ -0.36
CHRNA1-202ENST00000348749 ZNF428Q96B54 188 aa12.8□□□□□ -0.36
CHRNA1-202ENST00000348749 TRAK1Q9UPV9 953 aa12.8□□□□□ -0.36
CHRNA1-202ENST00000348749 RRP7AQ9Y3A4 280 aaKnown RBP12.8□□□□□ -0.36
CHRNA1-202ENST00000348749 CAMSAP1Q5T5Y3 1602 aa12.79□□□□□ -0.36
CHRNA1-202ENST00000348749 COL3A1P02461 1466 aaPredicted RBP12.79□□□□□ -0.36
CHRNA1-202ENST00000348749 BAG4O95429 457 aaKnown RBP12.79□□□□□ -0.36
CHRNA1-202ENST00000348749 NEUROD2Q15784 382 aa12.79□□□□□ -0.36
CHRNA1-202ENST00000348749 CCDC94Q9BW85 323 aaPredicted RBP12.79□□□□□ -0.36
CHRNA1-202ENST00000348749 KIF16BQ96L93 1317 aa12.78□□□□□ -0.36
CHRNA1-202ENST00000348749 REREQ9P2R6 1566 aa12.78□□□□□ -0.36
CHRNA1-202ENST00000348749 IPO8O15397 1037 aaKnown RBP12.78□□□□□ -0.36
CHRNA1-202ENST00000348749 SSFA2P28290 1259 aa12.78□□□□□ -0.36
CHRNA1-202ENST00000348749 XPCQ01831 940 aaPredicted RBP12.78□□□□□ -0.36
CHRNA1-202ENST00000348749 CHMP4BQ9H444 224 aaKnown RBP12.78□□□□□ -0.36
CHRNA1-202ENST00000348749 CLTCQ00610 1675 aaKnown RBP12.78□□□□□ -0.36
CHRNA1-202ENST00000348749 VGFO15240 615 aaPredicted RBP12.78□□□□□ -0.36
CHRNA1-202ENST00000348749 U2AF1L5P0DN76 240 aaPredicted RBP12.78□□□□□ -0.36
CHRNA1-202ENST00000348749 FGD1P98174 961 aa12.78□□□□□ -0.36
CHRNA1-202ENST00000348749 U2AF1Q01081 240 aaKnown RBP eCLIP12.78□□□□□ -0.36
CHRNA1-202ENST00000348749 ATF7IPQ6VMQ6 1270 aa12.78□□□□□ -0.36
CHRNA1-202ENST00000348749 ABCC3O15438 1527 aa12.78□□□□□ -0.36
CHRNA1-202ENST00000348749 FRMPD1Q5SYB0 1578 aa12.77□□□□□ -0.36
CHRNA1-202ENST00000348749 CDC42BPGQ6DT37 1551 aa12.77□□□□□ -0.36
CHRNA1-202ENST00000348749 NEXMIFQ5QGS0 1516 aa12.77□□□□□ -0.37
CHRNA1-202ENST00000348749 BRPF1P55201 1214 aaPredicted RBP12.77□□□□□ -0.37
CHRNA1-202ENST00000348749 ALDH1L2Q3SY69 923 aa12.77□□□□□ -0.37
CHRNA1-202ENST00000348749 BCL2L13Q9BXK5 485 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms