RNA–Protein interactions for RNA: ENST00000348547.6

ERGIC3-202, Transcript of ERGIC and golgi 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ERGIC3, Length 1,359 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-202ENST00000348547 ANKRD26Q9UPS8 1709 aa17.65■□□□□ 0.42
ERGIC3-202ENST00000348547 EDC4Q6P2E9 1401 aaKnown RBP17.65■□□□□ 0.42
ERGIC3-202ENST00000348547 DDX10Q13206 875 aaKnown RBP17.65■□□□□ 0.42
ERGIC3-202ENST00000348547 NGDNQ8NEJ9 315 aaKnown RBP17.64■□□□□ 0.41
ERGIC3-202ENST00000348547 MED1Q15648 1581 aaPredicted RBP17.63■□□□□ 0.41
ERGIC3-202ENST00000348547 ZRANB1Q9UGI0 708 aa17.63■□□□□ 0.41
ERGIC3-202ENST00000348547 NPHP3Q7Z494 1330 aa17.62■□□□□ 0.41
ERGIC3-202ENST00000348547 SCAF1Q9H7N4 1312 aaKnown RBP17.62■□□□□ 0.41
ERGIC3-202ENST00000348547 KRT28Q7Z3Y7 464 aa17.62■□□□□ 0.41
ERGIC3-202ENST00000348547 ILDR1Q86SU0 546 aaPredicted RBP17.62■□□□□ 0.41
ERGIC3-202ENST00000348547 COL22A1Q8NFW1 1626 aaPredicted RBP17.61■□□□□ 0.41
ERGIC3-202ENST00000348547 TTC21BQ7Z4L5 1316 aa17.61■□□□□ 0.41
ERGIC3-202ENST00000348547 TERF2IPQ9NYB0 399 aa17.61■□□□□ 0.41
ERGIC3-202ENST00000348547 PHRF1Q9P1Y6 1649 aaKnown RBP17.61■□□□□ 0.41
ERGIC3-202ENST00000348547 TNS3Q68CZ2 1445 aa17.61■□□□□ 0.41
ERGIC3-202ENST00000348547 SBNO1A3KN83 1393 aa17.6■□□□□ 0.41
ERGIC3-202ENST00000348547 NME9Q86XW9 330 aa17.6■□□□□ 0.41
ERGIC3-202ENST00000348547 SHPRHQ149N8 1683 aa17.6■□□□□ 0.41
ERGIC3-202ENST00000348547 AMER1Q5JTC6 1135 aaPredicted RBP17.59■□□□□ 0.41
ERGIC3-202ENST00000348547 OVOS2A0A0J9YW53 1432 aa17.59■□□□□ 0.41
ERGIC3-202ENST00000348547 OVOS2Q6IE36 1432 aa17.59■□□□□ 0.41
ERGIC3-202ENST00000348547 SPATA31A3Q5VYP0 1347 aa17.59■□□□□ 0.41
ERGIC3-202ENST00000348547 HSPA1LP34931 641 aa17.58■□□□□ 0.4
ERGIC3-202ENST00000348547 PSME1Q06323 249 aa17.58■□□□□ 0.4
ERGIC3-202ENST00000348547 HDGFL2Q7Z4V5 671 aaPredicted RBP17.58■□□□□ 0.4
ERGIC3-202ENST00000348547 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.58■□□□□ 0.4
ERGIC3-202ENST00000348547 ZNF692Q9BU19 519 aaPredicted RBP17.57■□□□□ 0.4
ERGIC3-202ENST00000348547 FYB1O15117 783 aa17.56■□□□□ 0.4
ERGIC3-202ENST00000348547 SLIT3O75094 1523 aa17.56■□□□□ 0.4
ERGIC3-202ENST00000348547 NFAT5O94916 1531 aa17.56■□□□□ 0.4
ERGIC3-202ENST00000348547 PNPLA6Q8IY17 1366 aa17.56■□□□□ 0.4
ERGIC3-202ENST00000348547 NUTM2GQ5VZR2 741 aa17.55■□□□□ 0.4
ERGIC3-202ENST00000348547 BRD4O60885 1362 aaPredicted RBP17.55■□□□□ 0.4
ERGIC3-202ENST00000348547 USP31Q70CQ4 1352 aa17.54■□□□□ 0.4
ERGIC3-202ENST00000348547 FBXO41Q8TF61 875 aa17.53■□□□□ 0.4
ERGIC3-202ENST00000348547 TTC21AQ8NDW8 1320 aa17.53■□□□□ 0.4
ERGIC3-202ENST00000348547 PAK3O75914 559 aaPredicted RBP17.53■□□□□ 0.4
ERGIC3-202ENST00000348547 GGNBP2Q9H3C7 697 aa17.53■□□□□ 0.4
ERGIC3-202ENST00000348547 USP19O94966 1318 aa17.52■□□□□ 0.4
ERGIC3-202ENST00000348547 PEAK1Q9H792 1746 aa17.52■□□□□ 0.39
ERGIC3-202ENST00000348547 NPC1L1Q9UHC9 1359 aa17.51■□□□□ 0.39
ERGIC3-202ENST00000348547 LTN1O94822 1766 aa17.51■□□□□ 0.39
ERGIC3-202ENST00000348547 CABLES1Q8TDN4 633 aa17.51■□□□□ 0.39
ERGIC3-202ENST00000348547 LRP6O75581 1613 aa17.5■□□□□ 0.39
ERGIC3-202ENST00000348547 FBLN1P23142 703 aa17.5■□□□□ 0.39
ERGIC3-202ENST00000348547 CGNL1Q0VF96 1302 aa17.5■□□□□ 0.39
ERGIC3-202ENST00000348547 ARHGEF10O15013 1369 aa17.49■□□□□ 0.39
ERGIC3-202ENST00000348547 ABTB2Q8N961 1025 aa17.49■□□□□ 0.39
ERGIC3-202ENST00000348547 COL18A1P39060 1754 aa17.48■□□□□ 0.39
ERGIC3-202ENST00000348547 KNSTRNQ9Y448 316 aa17.48■□□□□ 0.39
ERGIC3-202ENST00000348547 MAP2P11137 1827 aaKnown RBP17.48■□□□□ 0.39
ERGIC3-202ENST00000348547 NSD2O96028 1365 aa17.47■□□□□ 0.39
ERGIC3-202ENST00000348547 PARD3Q8TEW0 1356 aa17.47■□□□□ 0.39
ERGIC3-202ENST00000348547 PLEKHG5O94827 1062 aa17.47■□□□□ 0.39
ERGIC3-202ENST00000348547 CC2D1BQ5T0F9 858 aaKnown RBP17.47■□□□□ 0.39
ERGIC3-202ENST00000348547 LRRC59Q96AG4 307 aaKnown RBP17.47■□□□□ 0.39
ERGIC3-202ENST00000348547 RGPD5Q99666 1765 aa17.46■□□□□ 0.39
ERGIC3-202ENST00000348547 NLRP6P59044 892 aa17.46■□□□□ 0.39
ERGIC3-202ENST00000348547 CNGB1Q14028 1251 aaPredicted RBP17.46■□□□□ 0.39
ERGIC3-202ENST00000348547 LMOD2Q6P5Q4 547 aa17.46■□□□□ 0.39
ERGIC3-202ENST00000348547 JCADQ9P266 1359 aa17.45■□□□□ 0.38
ERGIC3-202ENST00000348547 LMO7Q8WWI1 1683 aa17.45■□□□□ 0.38
ERGIC3-202ENST00000348547 PLCH1Q4KWH8 1693 aa17.42■□□□□ 0.38
ERGIC3-202ENST00000348547 SMG6Q86US8 1419 aaKnown RBP17.41■□□□□ 0.38
ERGIC3-202ENST00000348547 SOX12O15370 315 aa17.41■□□□□ 0.38
ERGIC3-202ENST00000348547 GCP02774 474 aa17.4■□□□□ 0.38
ERGIC3-202ENST00000348547 TNNT2P45379 298 aaPredicted RBP17.4■□□□□ 0.38
ERGIC3-202ENST00000348547 NLRP13Q86W25 1043 aa17.4■□□□□ 0.38
ERGIC3-202ENST00000348547 COG3Q96JB2 828 aa17.4■□□□□ 0.38
ERGIC3-202ENST00000348547 PRKRIP1Q9H875 184 aaPredicted RBP17.4■□□□□ 0.38
ERGIC3-202ENST00000348547 NRAPQ86VF7 1730 aa17.39■□□□□ 0.38
ERGIC3-202ENST00000348547 KIAA0232Q92628 1395 aa17.39■□□□□ 0.38
ERGIC3-202ENST00000348547 COL3A1P02461 1466 aaPredicted RBP17.39■□□□□ 0.37
ERGIC3-202ENST00000348547 MORC1Q86VD1 984 aa17.39■□□□□ 0.37
ERGIC3-202ENST00000348547 AATKQ6ZMQ8 1374 aa17.39■□□□□ 0.37
ERGIC3-202ENST00000348547 MAP3K19Q56UN5 1328 aa17.38■□□□□ 0.37
ERGIC3-202ENST00000348547 RGPD2P0DJD1 1756 aa17.38■□□□□ 0.37
ERGIC3-202ENST00000348547 CAMTA1Q9Y6Y1 1673 aa17.38■□□□□ 0.37
ERGIC3-202ENST00000348547 CPDO75976 1380 aa17.38■□□□□ 0.37
ERGIC3-202ENST00000348547 RRS1Q15050 365 aaKnown RBP17.38■□□□□ 0.37
ERGIC3-202ENST00000348547 EMILIN1Q9Y6C2 1016 aa17.38■□□□□ 0.37
ERGIC3-202ENST00000348547 COL14A1Q05707 1796 aaKnown RBP17.37■□□□□ 0.37
ERGIC3-202ENST00000348547 DIEXFQ68CQ4 756 aaKnown RBP17.37■□□□□ 0.37
ERGIC3-202ENST00000348547 POLKQ9UBT6 870 aa17.37■□□□□ 0.37
ERGIC3-202ENST00000348547 PPP2R1AP30153 589 aa17.36■□□□□ 0.37
ERGIC3-202ENST00000348547 ZC3H6P61129 1189 aaKnown RBP17.36■□□□□ 0.37
ERGIC3-202ENST00000348547 ARHGEF25Q86VW2 580 aa17.36■□□□□ 0.37
ERGIC3-202ENST00000348547 NUTM2BA6NNL0 878 aaPredicted RBP17.35■□□□□ 0.37
ERGIC3-202ENST00000348547 NUTM2EB1AL46 878 aaPredicted RBP17.35■□□□□ 0.37
ERGIC3-202ENST00000348547 CCDC184Q52MB2 194 aa17.35■□□□□ 0.37
ERGIC3-202ENST00000348547 NUTM2AQ8IVF1 878 aaPredicted RBP17.35■□□□□ 0.37
ERGIC3-202ENST00000348547 CDK12Q9NYV4 1490 aaPredicted RBP17.35■□□□□ 0.37
ERGIC3-202ENST00000348547 ABCC6O95255 1503 aa17.34■□□□□ 0.37
ERGIC3-202ENST00000348547 CHRNA2Q15822 529 aa17.34■□□□□ 0.37
ERGIC3-202ENST00000348547 AXIN2Q9Y2T1 843 aa17.34■□□□□ 0.37
ERGIC3-202ENST00000348547 SPATA31A6Q5VVP1 1343 aa17.34■□□□□ 0.37
ERGIC3-202ENST00000348547 RGPD1P0DJD0 1748 aa17.33■□□□□ 0.37
ERGIC3-202ENST00000348547 NWD2Q9ULI1 1742 aa17.33■□□□□ 0.37
ERGIC3-202ENST00000348547 FAM83GA6ND36 823 aa17.33■□□□□ 0.36
ERGIC3-202ENST00000348547 ADAMTS2O95450 1211 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 137.9 ms