RNA–Protein interactions for RNA: ENST00000348069.6

NLRP3-202, Transcript of NLR family pyrin domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NLRP3, Length 3,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-202ENST00000348069 RIPK4P57078 832 aa10.11□□□□□ -0.79
NLRP3-202ENST00000348069 ITPRIPQ8IWB1 547 aa10.11□□□□□ -0.79
NLRP3-202ENST00000348069 ZNF428Q96B54 188 aa10.11□□□□□ -0.79
NLRP3-202ENST00000348069 CSB-PGBD3P0DP91 1061 aa10.1□□□□□ -0.79
NLRP3-202ENST00000348069 MRE11P49959 708 aa10.1□□□□□ -0.79
NLRP3-202ENST00000348069 SLFN5Q08AF3 891 aa10.1□□□□□ -0.79
NLRP3-202ENST00000348069 KLHL34Q8N239 644 aa10.1□□□□□ -0.79
NLRP3-202ENST00000348069 C22orf23Q9BZE7 217 aa10.1□□□□□ -0.79
NLRP3-202ENST00000348069 FYB1O15117 783 aa10.09□□□□□ -0.79
NLRP3-202ENST00000348069 PRKAR2BP31323 418 aa10.09□□□□□ -0.79
NLRP3-202ENST00000348069 MCM4P33991 863 aa10.09□□□□□ -0.79
NLRP3-202ENST00000348069 TRPM1Q7Z4N2 1603 aa10.09□□□□□ -0.79
NLRP3-202ENST00000348069 IGHDP01880 384 aa10.09□□□□□ -0.79
NLRP3-202ENST00000348069 PDZRN3Q9UPQ7 1066 aa10.09□□□□□ -0.79
NLRP3-202ENST00000348069 DCTN1Q14203 1278 aa10.09□□□□□ -0.79
NLRP3-202ENST00000348069 LAMC1P11047 1609 aa10.08□□□□□ -0.8
NLRP3-202ENST00000348069 SMC4Q9NTJ3 1288 aa10.08□□□□□ -0.8
NLRP3-202ENST00000348069 INSRP06213 1382 aa10.08□□□□□ -0.8
NLRP3-202ENST00000348069 PTMAP06454 111 aaKnown RBP10.08□□□□□ -0.8
NLRP3-202ENST00000348069 PDE3AQ14432 1141 aa10.08□□□□□ -0.8
NLRP3-202ENST00000348069 PARD3Q8TEW0 1356 aa10.08□□□□□ -0.8
NLRP3-202ENST00000348069 ABCA9Q8IUA7 1624 aa10.08□□□□□ -0.8
NLRP3-202ENST00000348069 ZC3H6P61129 1189 aaKnown RBP10.08□□□□□ -0.8
NLRP3-202ENST00000348069 RRAGDQ9NQL2 400 aaPredicted RBP10.08□□□□□ -0.8
NLRP3-202ENST00000348069 METP08581 1390 aa10.08□□□□□ -0.8
NLRP3-202ENST00000348069 ZMYM4Q5VZL5 1548 aa10.07□□□□□ -0.8
NLRP3-202ENST00000348069 DNTTIP2Q5QJE6 756 aaKnown RBP10.07□□□□□ -0.8
NLRP3-202ENST00000348069 DDX17Q92841 729 aaKnown RBP10.07□□□□□ -0.8
NLRP3-202ENST00000348069 GPRASP1Q5JY77 1395 aa10.07□□□□□ -0.8
NLRP3-202ENST00000348069 SEC24BO95487 1268 aa10.07□□□□□ -0.8
NLRP3-202ENST00000348069 SULT6B1Q6IMI4 303 aa10.07□□□□□ -0.8
NLRP3-202ENST00000348069 USHBP1Q8N6Y0 703 aa10.07□□□□□ -0.8
NLRP3-202ENST00000348069 TBC1D2Q9BYX2 928 aa10.07□□□□□ -0.8
NLRP3-202ENST00000348069 PANK2Q9BZ23 570 aa10.07□□□□□ -0.8
NLRP3-202ENST00000348069 ACEP12821 1306 aa10.07□□□□□ -0.8
NLRP3-202ENST00000348069 KDM2BQ8NHM5 1336 aa10.07□□□□□ -0.8
NLRP3-202ENST00000348069 APBB1O00213 710 aa10.06□□□□□ -0.8
NLRP3-202ENST00000348069 ATF3P18847 181 aa10.06□□□□□ -0.8
NLRP3-202ENST00000348069 PPP6R1Q9UPN7 881 aa10.06□□□□□ -0.8
NLRP3-202ENST00000348069 UNC13BO14795 1591 aa10.06□□□□□ -0.8
NLRP3-202ENST00000348069 RRP9O43818 475 aaKnown RBP10.06□□□□□ -0.8
NLRP3-202ENST00000348069 XRCC6P12956 609 aaKnown RBP eCLIP10.06□□□□□ -0.8
NLRP3-202ENST00000348069 ESPNB1AK53 854 aa10.06□□□□□ -0.8
NLRP3-202ENST00000348069 PTPRTO14522 1441 aa10.05□□□□□ -0.8
NLRP3-202ENST00000348069 TPRNQ4KMQ1 711 aa10.05□□□□□ -0.8
NLRP3-202ENST00000348069 RTF1Q92541 710 aaKnown RBP10.05□□□□□ -0.8
NLRP3-202ENST00000348069 RUNDC1Q96C34 613 aa10.05□□□□□ -0.8
NLRP3-202ENST00000348069 MIS18AQ9NYP9 233 aa10.05□□□□□ -0.8
NLRP3-202ENST00000348069 GRPEL1Q9HAV7 217 aa10.05□□□□□ -0.8
NLRP3-202ENST00000348069 DDX49Q9Y6V7 483 aaKnown RBP10.05□□□□□ -0.8
NLRP3-202ENST00000348069 HECW2Q9P2P5 1572 aa10.05□□□□□ -0.8
NLRP3-202ENST00000348069 ZKSCAN2Q63HK3 967 aa10.04□□□□□ -0.8
NLRP3-202ENST00000348069 YTHDC2Q9H6S0 1430 aaKnown RBP10.04□□□□□ -0.8
NLRP3-202ENST00000348069 HSP90AB2PQ58FF8 381 aa10.04□□□□□ -0.8
NLRP3-202ENST00000348069 TAF7LQ5H9L4 462 aa10.03□□□□□ -0.8
NLRP3-202ENST00000348069 SPINK5Q9NQ38 1064 aaPredicted RBP10.03□□□□□ -0.8
NLRP3-202ENST00000348069 DMRT2Q9Y5R5 561 aa10.03□□□□□ -0.8
NLRP3-202ENST00000348069 A0A1W2PP64 1363 aa10.03□□□□□ -0.8
NLRP3-202ENST00000348069 ABCC3O15438 1527 aa10.03□□□□□ -0.8
NLRP3-202ENST00000348069 EIF2AK4Q9P2K8 1649 aaKnown RBP10.03□□□□□ -0.8
NLRP3-202ENST00000348069 ATAD2Q6PL18 1390 aa10.03□□□□□ -0.8
NLRP3-202ENST00000348069 FAM13BQ9NYF5 915 aa10.03□□□□□ -0.8
NLRP3-202ENST00000348069 FAM83GA6ND36 823 aa10.03□□□□□ -0.8
NLRP3-202ENST00000348069 DZIP1LQ8IYY4 767 aaKnown RBP10.03□□□□□ -0.8
NLRP3-202ENST00000348069 CABLES1Q8TDN4 633 aa10.03□□□□□ -0.8
NLRP3-202ENST00000348069 ORAI2Q96SN7 254 aa10.03□□□□□ -0.8
NLRP3-202ENST00000348069 MAGI2Q86UL8 1455 aa10.02□□□□□ -0.8
NLRP3-202ENST00000348069 CALD1Q05682 793 aaKnown RBP10.02□□□□□ -0.8
NLRP3-202ENST00000348069 ZNF330Q9Y3S2 320 aaPredicted RBP10.02□□□□□ -0.8
NLRP3-202ENST00000348069 SKOR2Q2VWA4 1001 aaPredicted RBP10.02□□□□□ -0.81
NLRP3-202ENST00000348069 NGEFQ8N5V2 710 aa10.02□□□□□ -0.81
NLRP3-202ENST00000348069 IQGAP3Q86VI3 1631 aa10.02□□□□□ -0.81
NLRP3-202ENST00000348069 BLMP54132 1417 aaPredicted RBP10.02□□□□□ -0.81
NLRP3-202ENST00000348069 PTMSP20962 102 aa10.02□□□□□ -0.81
NLRP3-202ENST00000348069 AEBP1Q8IUX7 1158 aa10.02□□□□□ -0.81
NLRP3-202ENST00000348069 LNPKQ9C0E8 428 aa10.02□□□□□ -0.81
NLRP3-202ENST00000348069 PLXNC1O60486 1568 aa10.02□□□□□ -0.81
NLRP3-202ENST00000348069 CLTCL1P53675 1640 aa10.01□□□□□ -0.81
NLRP3-202ENST00000348069 SLC4A10Q6U841 1118 aa10.01□□□□□ -0.81
NLRP3-202ENST00000348069 WWC1Q8IX03 1113 aa10.01□□□□□ -0.81
NLRP3-202ENST00000348069 TMEM2Q9UHN6 1383 aa10.01□□□□□ -0.81
NLRP3-202ENST00000348069 EXOSC9Q06265 439 aaKnown RBP10.01□□□□□ -0.81
NLRP3-202ENST00000348069 KIDINS220Q9ULH0 1771 aa10.01□□□□□ -0.81
NLRP3-202ENST00000348069 IPO8O15397 1037 aaKnown RBP10.01□□□□□ -0.81
NLRP3-202ENST00000348069 CLCN1P35523 988 aa10.01□□□□□ -0.81
NLRP3-202ENST00000348069 TBC1D32Q96NH3 1257 aa10.01□□□□□ -0.81
NLRP3-202ENST00000348069 NLRP2Q9NX02 1062 aa10.01□□□□□ -0.81
NLRP3-202ENST00000348069 MCM10Q7L590 875 aa10□□□□□ -0.81
NLRP3-202ENST00000348069 TRPM2O94759 1503 aa10□□□□□ -0.81
NLRP3-202ENST00000348069 PHF8Q9UPP1 1060 aa10□□□□□ -0.81
NLRP3-202ENST00000348069 NKTRP30414 1462 aaKnown RBP10□□□□□ -0.81
NLRP3-202ENST00000348069 NASPP49321 788 aaPredicted RBP10□□□□□ -0.81
NLRP3-202ENST00000348069 PIP4K2BP78356 416 aa10□□□□□ -0.81
NLRP3-202ENST00000348069 POLKQ9UBT6 870 aa10□□□□□ -0.81
NLRP3-202ENST00000348069 PRDM4Q9UKN5 801 aa10□□□□□ -0.81
NLRP3-202ENST00000348069 CCDC9Q9Y3X0 531 aaKnown RBP10□□□□□ -0.81
NLRP3-202ENST00000348069 PLCB2Q00722 1185 aa9.99□□□□□ -0.81
NLRP3-202ENST00000348069 ANKRD45Q5TZF3 282 aa9.99□□□□□ -0.81
NLRP3-202ENST00000348069 ARAP3Q8WWN8 1544 aa9.99□□□□□ -0.81
NLRP3-202ENST00000348069 EIF2S2P20042 333 aaKnown RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms