RNA–Protein interactions for RNA: ENST00000347968.7

MBD1-204, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-204ENST00000347968 GTPBP4Q9BZE4 634 aaKnown RBP20.09■□□□□ 0.81
MBD1-204ENST00000347968 PRPF40AO75400 957 aaKnown RBP20.09■□□□□ 0.81
MBD1-204ENST00000347968 CDK11BP21127 795 aaKnown RBP20.08■□□□□ 0.81
MBD1-204ENST00000347968 ZNF771Q7L3S4 317 aaPredicted RBP20.08■□□□□ 0.81
MBD1-204ENST00000347968 MYRIPQ8NFW9 859 aa20.08■□□□□ 0.81
MBD1-204ENST00000347968 LNPKQ9C0E8 428 aa20.08■□□□□ 0.81
MBD1-204ENST00000347968 CIZ1Q9ULV3 898 aaPredicted RBP20.08■□□□□ 0.81
MBD1-204ENST00000347968 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.08■□□□□ 0.8
MBD1-204ENST00000347968 SCAPERQ9BY12 1400 aa20.07■□□□□ 0.8
MBD1-204ENST00000347968 LETM1O95202 739 aaPredicted RBP20.07■□□□□ 0.8
MBD1-204ENST00000347968 HS1BP3Q53T59 392 aa20.06■□□□□ 0.8
MBD1-204ENST00000347968 NSFL1CQ9UNZ2 370 aaKnown RBP20.06■□□□□ 0.8
MBD1-204ENST00000347968 ZNF445P59923 1031 aa20.06■□□□□ 0.8
MBD1-204ENST00000347968 MAST1Q9Y2H9 1570 aa20.06■□□□□ 0.8
MBD1-204ENST00000347968 TMF1P82094 1093 aa20.06■□□□□ 0.8
MBD1-204ENST00000347968 KIF2CQ99661 725 aa20.06■□□□□ 0.8
MBD1-204ENST00000347968 K7ELQ4 463 aaPredicted RBP20.05■□□□□ 0.8
MBD1-204ENST00000347968 WWC1Q8IX03 1113 aa20.05■□□□□ 0.8
MBD1-204ENST00000347968 INSRP06213 1382 aa20.05■□□□□ 0.8
MBD1-204ENST00000347968 ADGRL1O94910 1474 aa20.05■□□□□ 0.8
MBD1-204ENST00000347968 SNX21Q969T3 373 aa20.04■□□□□ 0.8
MBD1-204ENST00000347968 CCDC39Q9UFE4 941 aa20.04■□□□□ 0.8
MBD1-204ENST00000347968 KDM5DQ9BY66 1539 aa20.04■□□□□ 0.8
MBD1-204ENST00000347968 KIAA2012Q0VF49 1180 aa20.04■□□□□ 0.8
MBD1-204ENST00000347968 CERS3Q8IU89 383 aa20.04■□□□□ 0.8
MBD1-204ENST00000347968 FTSJ3Q8IY81 847 aaKnown RBP20.04■□□□□ 0.8
MBD1-204ENST00000347968 GPT2Q8TD30 523 aa20.03■□□□□ 0.8
MBD1-204ENST00000347968 LMBRD1Q9NUN5 540 aa20.03■□□□□ 0.8
MBD1-204ENST00000347968 DUOX2Q9NRD8 1548 aa20.02■□□□□ 0.8
MBD1-204ENST00000347968 BCL2L12Q9HB09 334 aa20.02■□□□□ 0.8
MBD1-204ENST00000347968 PLXNC1O60486 1568 aa20.02■□□□□ 0.8
MBD1-204ENST00000347968 TTC12Q9H892 705 aaPredicted RBP20.02■□□□□ 0.8
MBD1-204ENST00000347968 TMEM63CQ9P1W3 806 aa20.02■□□□□ 0.8
MBD1-204ENST00000347968 RBM25P49756 843 aaKnown RBP20.01■□□□□ 0.79
MBD1-204ENST00000347968 ABCA9Q8IUA7 1624 aa20.01■□□□□ 0.79
MBD1-204ENST00000347968 KIF3BO15066 747 aa20.01■□□□□ 0.79
MBD1-204ENST00000347968 TAF7LQ5H9L4 462 aa20.01■□□□□ 0.79
MBD1-204ENST00000347968 PDCL2Q8N4E4 241 aa20.01■□□□□ 0.79
MBD1-204ENST00000347968 ERBINQ96RT1 1412 aa20■□□□□ 0.79
MBD1-204ENST00000347968 PTMSP20962 102 aa20■□□□□ 0.79
MBD1-204ENST00000347968 FOXD4L6Q3SYB3 417 aaPredicted RBP20■□□□□ 0.79
MBD1-204ENST00000347968 FOXD4L3Q6VB84 417 aaPredicted RBP20■□□□□ 0.79
MBD1-204ENST00000347968 MAGI2Q86UL8 1455 aa20■□□□□ 0.79
MBD1-204ENST00000347968 KCNJ4P48050 445 aa20■□□□□ 0.79
MBD1-204ENST00000347968 COL17A1Q9UMD9 1497 aaPredicted RBP20■□□□□ 0.79
MBD1-204ENST00000347968 ITPRIPQ8IWB1 547 aa19.99■□□□□ 0.79
MBD1-204ENST00000347968 PLA2R1Q13018 1463 aa19.99■□□□□ 0.79
MBD1-204ENST00000347968 CCDC144AA2RUR9 1427 aa19.99■□□□□ 0.79
MBD1-204ENST00000347968 KIF3AQ9Y496 699 aa19.99■□□□□ 0.79
MBD1-204ENST00000347968 CD109Q6YHK3 1445 aa19.99■□□□□ 0.79
MBD1-204ENST00000347968 ZFYVE16Q7Z3T8 1539 aa19.99■□□□□ 0.79
MBD1-204ENST00000347968 MVPQ14764 893 aaKnown RBP19.98■□□□□ 0.79
MBD1-204ENST00000347968 TRERF1Q96PN7 1200 aa19.98■□□□□ 0.79
MBD1-204ENST00000347968 UNC13BO14795 1591 aa19.96■□□□□ 0.79
MBD1-204ENST00000347968 ZBTB9Q96C00 473 aa19.96■□□□□ 0.79
MBD1-204ENST00000347968 IBTKQ9P2D0 1353 aaPredicted RBP19.95■□□□□ 0.78
MBD1-204ENST00000347968 RAPGEF3O95398 923 aa19.95■□□□□ 0.78
MBD1-204ENST00000347968 IRX5P78411 483 aaPredicted RBP19.95■□□□□ 0.78
MBD1-204ENST00000347968 ZGPATQ8N5A5 531 aaKnown RBP19.95■□□□□ 0.78
MBD1-204ENST00000347968 PLCB2Q00722 1185 aa19.94■□□□□ 0.78
MBD1-204ENST00000347968 NOLC1Q14978 699 aaKnown RBP eCLIP19.94■□□□□ 0.78
MBD1-204ENST00000347968 ATP7AQ04656 1500 aa19.94■□□□□ 0.78
MBD1-204ENST00000347968 MCM5P33992 734 aa19.94■□□□□ 0.78
MBD1-204ENST00000347968 ARAP3Q8WWN8 1544 aa19.94■□□□□ 0.78
MBD1-204ENST00000347968 AEBP1Q8IUX7 1158 aa19.93■□□□□ 0.78
MBD1-204ENST00000347968 LRSAM1Q6UWE0 723 aa19.93■□□□□ 0.78
MBD1-204ENST00000347968 DZIP1LQ8IYY4 767 aaKnown RBP19.93■□□□□ 0.78
MBD1-204ENST00000347968 TSR2Q969E8 191 aaKnown RBP19.91■□□□□ 0.78
MBD1-204ENST00000347968 PRAG1Q86YV5 1406 aa19.91■□□□□ 0.78
MBD1-204ENST00000347968 USP25Q9UHP3 1055 aa19.91■□□□□ 0.78
MBD1-204ENST00000347968 IQGAP3Q86VI3 1631 aa19.91■□□□□ 0.78
MBD1-204ENST00000347968 KIF16BQ96L93 1317 aa19.91■□□□□ 0.78
MBD1-204ENST00000347968 NINLQ9Y2I6 1382 aa19.9■□□□□ 0.78
MBD1-204ENST00000347968 ERICH4A6NGS2 130 aa19.9■□□□□ 0.78
MBD1-204ENST00000347968 TBC1D9Q6ZT07 1266 aa19.9■□□□□ 0.78
MBD1-204ENST00000347968 RIOK3O14730 519 aaKnown RBP19.89■□□□□ 0.77
MBD1-204ENST00000347968 TCP11L2Q8N4U5 519 aa19.89■□□□□ 0.77
MBD1-204ENST00000347968 PRIMPOLQ96LW4 560 aa19.89■□□□□ 0.77
MBD1-204ENST00000347968 ZKSCAN2Q63HK3 967 aa19.88■□□□□ 0.77
MBD1-204ENST00000347968 SMC4Q9NTJ3 1288 aa19.88■□□□□ 0.77
MBD1-204ENST00000347968 GGT6Q6P531 493 aa19.88■□□□□ 0.77
MBD1-204ENST00000347968 ZMYM3Q14202 1370 aa19.87■□□□□ 0.77
MBD1-204ENST00000347968 HMGN5P82970 282 aaKnown RBP19.87■□□□□ 0.77
MBD1-204ENST00000347968 NAA30Q147X3 362 aaPredicted RBP19.87■□□□□ 0.77
MBD1-204ENST00000347968 ANKRD45Q5TZF3 282 aa19.87■□□□□ 0.77
MBD1-204ENST00000347968 TRIM27P14373 513 aa19.87■□□□□ 0.77
MBD1-204ENST00000347968 C1orf115Q9H7X2 142 aa19.87■□□□□ 0.77
MBD1-204ENST00000347968 GDPD2Q9HCC8 539 aa19.87■□□□□ 0.77
MBD1-204ENST00000347968 INO80Q9ULG1 1556 aaPredicted RBP19.86■□□□□ 0.77
MBD1-204ENST00000347968 PIBF1Q8WXW3 757 aa19.86■□□□□ 0.77
MBD1-204ENST00000347968 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.86■□□□□ 0.77
MBD1-204ENST00000347968 ZFP91Q96JP5 570 aaPredicted RBP19.86■□□□□ 0.77
MBD1-204ENST00000347968 ZDHHC9Q9Y397 364 aa19.85■□□□□ 0.77
MBD1-204ENST00000347968 A2MP01023 1474 aa19.85■□□□□ 0.77
MBD1-204ENST00000347968 CLEC17AQ6ZS10 378 aa19.84■□□□□ 0.77
MBD1-204ENST00000347968 TMEM57Q8N5G2 664 aa19.83■□□□□ 0.77
MBD1-204ENST00000347968 GTF2F1P35269 517 aaKnown RBP eCLIP19.83■□□□□ 0.761e-8■■■□□ 15.2
MBD1-204ENST00000347968 FAM69CQ0P6D2 419 aa19.83■□□□□ 0.76
MBD1-204ENST00000347968 TSPY26PQ9H489 355 aa19.83■□□□□ 0.76
MBD1-204ENST00000347968 ZNF518AQ6AHZ1 1483 aa19.83■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms