RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 FMNL2Q96PY5 1086 aa20.87■□□□□ 0.93
SPAST-202ENST00000345662 DDX58O95786 925 aaKnown RBP20.86■□□□□ 0.93
SPAST-202ENST00000345662 PRDM10Q9NQV6 1147 aa20.86■□□□□ 0.93
SPAST-202ENST00000345662 CALRP27797 417 aaKnown RBP20.85■□□□□ 0.93
SPAST-202ENST00000345662 TBC1D2Q9BYX2 928 aa20.85■□□□□ 0.93
SPAST-202ENST00000345662 KRT85P78386 507 aa20.85■□□□□ 0.93
SPAST-202ENST00000345662 CAGE1Q8TC20 777 aa20.85■□□□□ 0.93
SPAST-202ENST00000345662 CBX1P83916 185 aa20.84■□□□□ 0.93
SPAST-202ENST00000345662 NBPF1Q3BBV0 1214 aa20.84■□□□□ 0.93
SPAST-202ENST00000345662 NFXL1Q6ZNB6 911 aa20.84■□□□□ 0.93
SPAST-202ENST00000345662 XPCQ01831 940 aaPredicted RBP20.84■□□□□ 0.93
SPAST-202ENST00000345662 CLASRPQ8N2M8 674 aaKnown RBP20.84■□□□□ 0.93
SPAST-202ENST00000345662 TWISTNBQ3B726 338 aaPredicted RBP20.83■□□□□ 0.93
SPAST-202ENST00000345662 FANCD2Q9BXW9 1451 aa20.83■□□□□ 0.93
SPAST-202ENST00000345662 ZNF396Q96N95 335 aaPredicted RBP20.83■□□□□ 0.92
SPAST-202ENST00000345662 KIAA1107Q9UPP5 1409 aa20.82■□□□□ 0.92
SPAST-202ENST00000345662 SURF6O75683 361 aaKnown RBP20.82■□□□□ 0.92
SPAST-202ENST00000345662 C20orf194Q5TEA3 1177 aa20.82■□□□□ 0.92
SPAST-202ENST00000345662 RALYLQ86SE5 291 aaKnown RBP20.82■□□□□ 0.92
SPAST-202ENST00000345662 CLCN1P35523 988 aa20.82■□□□□ 0.92
SPAST-202ENST00000345662 NAP1L1P55209 391 aaKnown RBP20.82■□□□□ 0.92
SPAST-202ENST00000345662 DCTN1Q14203 1278 aa20.82■□□□□ 0.92
SPAST-202ENST00000345662 FGD5Q6ZNL6 1462 aa20.81■□□□□ 0.92
SPAST-202ENST00000345662 FSD1Q9BTV5 496 aa20.81■□□□□ 0.92
SPAST-202ENST00000345662 TTLL5Q6EMB2 1281 aa20.81■□□□□ 0.92
SPAST-202ENST00000345662 ERICH4A6NGS2 130 aa20.8■□□□□ 0.92
SPAST-202ENST00000345662 C11orf95C9JLR9 678 aaPredicted RBP20.8■□□□□ 0.92
SPAST-202ENST00000345662 NCBP3Q53F19 620 aaKnown RBP20.8■□□□□ 0.92
SPAST-202ENST00000345662 AXDND1Q5T1B0 1012 aaPredicted RBP20.8■□□□□ 0.92
SPAST-202ENST00000345662 CYP46A1Q9Y6A2 500 aa20.8■□□□□ 0.92
SPAST-202ENST00000345662 HIP1O00291 1037 aa20.8■□□□□ 0.92
SPAST-202ENST00000345662 TNPO1Q92973 898 aaKnown RBP20.8■□□□□ 0.92
SPAST-202ENST00000345662 CFTRP13569 1480 aa20.8■□□□□ 0.92
SPAST-202ENST00000345662 SMARCE1Q969G3 411 aa20.79■□□□□ 0.92
SPAST-202ENST00000345662 EIF3JO75822 258 aaKnown RBP20.79■□□□□ 0.92
SPAST-202ENST00000345662 CCDC191Q8NCU4 936 aa20.79■□□□□ 0.92
SPAST-202ENST00000345662 ERLIN1O75477 346 aa20.79■□□□□ 0.92
SPAST-202ENST00000345662 MCM5P33992 734 aa20.79■□□□□ 0.92
SPAST-202ENST00000345662 NUP62CLQ9H1M0 184 aa20.79■□□□□ 0.92
SPAST-202ENST00000345662 GNAI2P04899 355 aa20.78■□□□□ 0.92
SPAST-202ENST00000345662 PRKAR2BP31323 418 aa20.78■□□□□ 0.92
SPAST-202ENST00000345662 TSPYL1Q9H0U9 437 aa20.78■□□□□ 0.92
SPAST-202ENST00000345662 EID1Q9Y6B2 187 aa20.78■□□□□ 0.92
SPAST-202ENST00000345662 FILIP1LQ4L180 1135 aa20.78■□□□□ 0.92
SPAST-202ENST00000345662 STK38Q15208 465 aa20.77■□□□□ 0.92
SPAST-202ENST00000345662 ERICH2A1L162 156 aa20.77■□□□□ 0.92
SPAST-202ENST00000345662 SERPINC1P01008 464 aa20.77■□□□□ 0.92
SPAST-202ENST00000345662 CEBPZQ03701 1054 aaKnown RBP20.77■□□□□ 0.92
SPAST-202ENST00000345662 RRP12Q5JTH9 1297 aaKnown RBP20.77■□□□□ 0.92
SPAST-202ENST00000345662 PLEKHH2Q8IVE3 1493 aa20.77■□□□□ 0.92
SPAST-202ENST00000345662 VPS53Q5VIR6 699 aa20.77■□□□□ 0.91
SPAST-202ENST00000345662 LARP1BQ659C4 914 aaKnown RBP20.77■□□□□ 0.91
SPAST-202ENST00000345662 ANKRD1Q15327 319 aa20.76■□□□□ 0.91
SPAST-202ENST00000345662 CABP2Q9NPB3 220 aa20.76■□□□□ 0.91
SPAST-202ENST00000345662 DYNC1I1O14576 645 aa20.76■□□□□ 0.91
SPAST-202ENST00000345662 WWC1Q8IX03 1113 aa20.75■□□□□ 0.91
SPAST-202ENST00000345662 LRRCC1Q9C099 1032 aa20.75■□□□□ 0.91
SPAST-202ENST00000345662 ERBINQ96RT1 1412 aa20.75■□□□□ 0.91
SPAST-202ENST00000345662 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.75■□□□□ 0.91
SPAST-202ENST00000345662 TIAM1Q13009 1591 aa20.74■□□□□ 0.91
SPAST-202ENST00000345662 KIF2AO00139 706 aaPredicted RBP20.74■□□□□ 0.91
SPAST-202ENST00000345662 FILIP1Q7Z7B0 1213 aa20.74■□□□□ 0.91
SPAST-202ENST00000345662 TTC5Q8N0Z6 440 aa20.74■□□□□ 0.91
SPAST-202ENST00000345662 CCDC30Q5VVM6 783 aa20.74■□□□□ 0.91
SPAST-202ENST00000345662 UBXN4Q92575 508 aa20.74■□□□□ 0.91
SPAST-202ENST00000345662 SSFA2P28290 1259 aa20.74■□□□□ 0.91
SPAST-202ENST00000345662 SPATA32Q96LK8 384 aa20.74■□□□□ 0.91
SPAST-202ENST00000345662 CEP57L1Q8IYX8 460 aa20.73■□□□□ 0.91
SPAST-202ENST00000345662 MAP3K11Q16584 847 aa20.73■□□□□ 0.91
SPAST-202ENST00000345662 PTPRGP23470 1445 aa20.73■□□□□ 0.91
SPAST-202ENST00000345662 PDIA4P13667 645 aaKnown RBP20.73■□□□□ 0.91
SPAST-202ENST00000345662 USP8P40818 1118 aa20.73■□□□□ 0.91
SPAST-202ENST00000345662 KIAA0754O94854 1291 aa20.72■□□□□ 0.91
SPAST-202ENST00000345662 GAPVD1Q14C86 1478 aa20.72■□□□□ 0.91
SPAST-202ENST00000345662 CFAP70Q5T0N1 1121 aa20.72■□□□□ 0.91
SPAST-202ENST00000345662 ZSCAN31Q96LW9 406 aaPredicted RBP20.72■□□□□ 0.91
SPAST-202ENST00000345662 DHX16O60231 1041 aaKnown RBP20.72■□□□□ 0.91
SPAST-202ENST00000345662 ME1P48163 572 aa20.72■□□□□ 0.91
SPAST-202ENST00000345662 SRCIN1Q9C0H9 1055 aa20.72■□□□□ 0.91
SPAST-202ENST00000345662 SKIDA1Q1XH10 827 aa20.72■□□□□ 0.91
SPAST-202ENST00000345662 DEF6Q9H4E7 631 aa20.72■□□□□ 0.91
SPAST-202ENST00000345662 WASHC4Q2M389 1173 aa20.71■□□□□ 0.91
SPAST-202ENST00000345662 TMCO3Q6UWJ1 677 aa20.71■□□□□ 0.91
SPAST-202ENST00000345662 ZNF428Q96B54 188 aa20.71■□□□□ 0.91
SPAST-202ENST00000345662 NEUROD6Q96NK8 337 aa20.71■□□□□ 0.91
SPAST-202ENST00000345662 CBFA2T2O43439 604 aa20.71■□□□□ 0.91
SPAST-202ENST00000345662 JMYQ8N9B5 988 aa20.71■□□□□ 0.91
SPAST-202ENST00000345662 CALCOCO1Q9P1Z2 691 aa20.71■□□□□ 0.91
SPAST-202ENST00000345662 CGNQ9P2M7 1197 aaKnown RBP20.71■□□□□ 0.91
SPAST-202ENST00000345662 CCDC183Q5T5S1 534 aa20.71■□□□□ 0.91
SPAST-202ENST00000345662 ZHX1Q9UKY1 873 aaPredicted RBP20.71■□□□□ 0.91
SPAST-202ENST00000345662 XRCC6P12956 609 aaKnown RBP eCLIP20.71■□□□□ 0.91
SPAST-202ENST00000345662 CCT4P50991 539 aaKnown RBP20.71■□□□□ 0.91
SPAST-202ENST00000345662 PTPN14Q15678 1187 aa20.71■□□□□ 0.91
SPAST-202ENST00000345662 TMEM57Q8N5G2 664 aa20.7■□□□□ 0.9
SPAST-202ENST00000345662 FAM177A1Q8N128 213 aaPredicted RBP20.7■□□□□ 0.9
SPAST-202ENST00000345662 NKTRP30414 1462 aaKnown RBP20.69■□□□□ 0.9
SPAST-202ENST00000345662 PPP6R1Q9UPN7 881 aa20.69■□□□□ 0.9
SPAST-202ENST00000345662 MAPK8IP2Q13387 824 aaPredicted RBP20.69■□□□□ 0.9
SPAST-202ENST00000345662 ERC1Q8IUD2 1116 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms